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Clc08G12460 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G12460
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionhistidine-containing phosphotransfer protein 4-like
Genome locationClcChr08:23694288..23696228
RNA-Seq ExpressionClc08G12460
SyntenyClc08G12460
Gene Ontology termsGO:0000160 - phosphorelay signal transduction system (biological process)
GO:0006468 - protein phosphorylation (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0009927 - histidine phosphotransfer kinase activity (molecular function)
GO:0043424 - protein histidine kinase binding (molecular function)
InterPro domainsIPR036641 - HPT domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445576.2 PREDICTED: histidine-containing phosphotransfer protein 4-like isoform X1 [Cucumis melo]2.4e-3180.41Show/hide
Query:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA
        MDSNLL RQVAYTKRCFFEQGYLDRDQFTQLEELQDD  PNFAEEIVSLFYNDSARLIRSIEQT+ SKPTDFEKLD        +SS   A  VTDA
Subjt:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA

XP_023002542.1 histidine-containing phosphotransfer protein 4-like [Cucurbita maxima]1.1e-3181.44Show/hide
Query:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA
        MDS+LLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDD  PNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLD        +SS   A  VT+A
Subjt:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA

XP_023537128.1 histidine-containing phosphotransfer protein 4-like [Cucurbita pepo subsp. pepo]1.1e-3181.44Show/hide
Query:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA
        MDS+LLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDD  PNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLD        +SS   A  VT+A
Subjt:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA

XP_038884045.1 histidine-containing phosphotransfer protein 4-like isoform X1 [Benincasa hispida]1.1e-3181.44Show/hide
Query:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA
        MDSNLLQRQVAYTK+CFFEQGYLDR+QFTQLEELQDDA PNFAEEIVSLFYNDSARLIRSIEQTMVSKP DFEKLD        +SS   A  VTDA
Subjt:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA

XP_038884046.1 histidine-containing phosphotransfer protein 4-like isoform X2 [Benincasa hispida]1.1e-3181.44Show/hide
Query:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA
        MDSNLLQRQVAYTK+CFFEQGYLDR+QFTQLEELQDDA PNFAEEIVSLFYNDSARLIRSIEQTMVSKP DFEKLD        +SS   A  VTDA
Subjt:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA

TrEMBL top hitse value%identityAlignment
A0A0A0LLW8 HPt domain-containing protein2.0e-3180.41Show/hide
Query:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA
        MDSNLL RQVAYTKRC FEQGYLDRDQFTQLEELQDD  PNFAEEIVSLFYNDSARLIRSIEQTM SKPTDFEKLD        +SS   A  VTDA
Subjt:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA

A0A1S3BD23 histidine-containing phosphotransfer protein 4-like isoform X11.2e-3180.41Show/hide
Query:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA
        MDSNLL RQVAYTKRCFFEQGYLDRDQFTQLEELQDD  PNFAEEIVSLFYNDSARLIRSIEQT+ SKPTDFEKLD        +SS   A  VTDA
Subjt:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA

A0A5A7VA52 Histidine-containing phosphotransfer protein 4-like isoform X11.2e-3180.41Show/hide
Query:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA
        MDSNLL RQVAYTKRCFFEQGYLDRDQFTQLEELQDD  PNFAEEIVSLFYNDSARLIRSIEQT+ SKPTDFEKLD        +SS   A  VTDA
Subjt:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA

A0A6J1GGG6 histidine-containing phosphotransfer protein 4-like1.5e-3180.41Show/hide
Query:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA
        MDS+LLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDD  PNFAEEIVSLFYNDSARLIRSIEQT+VSKPTDFEKLD        +SS   A  VT+A
Subjt:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA

A0A6J1KJT4 histidine-containing phosphotransfer protein 4-like5.2e-3281.44Show/hide
Query:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA
        MDS+LLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDD  PNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLD        +SS   A  VT+A
Subjt:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTC-----TSSRAVAQGVTDA

SwissProt top hitse value%identityAlignment
Q0DK78 Pseudo histidine-containing phosphotransfer protein 22.5e-1550.65Show/hide
Query:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDT
        M+ + L+RQ+ + K+  F+QGYLD +QF QLEELQD++ PNF EE+ +LF+ DS+RL+ +IEQ +   P DF +LD+
Subjt:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDT

Q0JJE3 Pseudo histidine-containing phosphotransfer protein 18.4e-1155.17Show/hide
Query:  QGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDT
        +GYLD +QF Q+E+LQD+A PNF EE+V+LF+ DS RL+ +IEQ +   P DF + DT
Subjt:  QGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDT

Q6F303 Pseudo histidine-containing phosphotransfer protein 57.3e-1551.95Show/hide
Query:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDT
        M+   L+RQ A  K+  F+QGYLD +QF Q+E+LQD+A PNFAEE+VSLF+ DS R++ + EQ +   P DF + DT
Subjt:  MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDT

Q9LU15 Histidine-containing phosphotransfer protein 41.1e-1056.9Show/hide
Query:  QGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDT
        QGYLD +QF +LEELQDDA PNF EE+ +L++ DSARLI +I+Q +     DF +LD+
Subjt:  QGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDT

Q9ZNV9 Histidine-containing phosphotransfer protein 11.9e-0739.47Show/hide
Query:  NLLQRQVA---YTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLD
        +L+Q+Q +   YTK  F E G LD  QF QL++LQD++ P+F  ++V+LF+ DS R++  +  ++  +  DF+K+D
Subjt:  NLLQRQVA---YTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLD

Arabidopsis top hitse value%identityAlignment
AT3G16360.1 HPT phosphotransmitter 47.8e-1256.9Show/hide
Query:  QGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDT
        QGYLD +QF +LEELQDDA PNF EE+ +L++ DSARLI +I+Q +     DF +LD+
Subjt:  QGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDT

AT3G16360.2 HPT phosphotransmitter 45.2e-1655.56Show/hide
Query:  LQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDT
        +QRQVA  K+  F+QGYLD +QF +LEELQDDA PNF EE+ +L++ DSARLI +I+Q +     DF +LD+
Subjt:  LQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDT

AT3G21510.1 histidine-containing phosphotransmitter 11.4e-0839.47Show/hide
Query:  NLLQRQVA---YTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLD
        +L+Q+Q +   YTK  F E G LD  QF QL++LQD++ P+F  ++V+LF+ DS R++  +  ++  +  DF+K+D
Subjt:  NLLQRQVA---YTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLD

AT3G29350.1 histidine-containing phosphotransmitter 25.2e-0840.85Show/hide
Query:  LQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPT-DFEKL
        LQRQ        ++QG+LD DQFT+L++LQDD  P+F  E++SLF+ D  +LI ++ + + +  T DF ++
Subjt:  LQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPT-DFEKL

AT3G29350.2 histidine-containing phosphotransmitter 25.2e-0840.85Show/hide
Query:  LQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPT-DFEKL
        LQRQ        ++QG+LD DQFT+L++LQDD  P+F  E++SLF+ D  +LI ++ + + +  T DF ++
Subjt:  LQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPT-DFEKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCAAACCTTTTGCAACGTCAAGTTGCCTACACGAAGAGGTGCTTTTTTGAGCAGGGTTATCTTGATCGTGATCAATTCACTCAGCTTGAAGAACTGCAAGATGA
TGCCTACCCGAATTTTGCTGAAGAAATTGTGTCTTTATTCTACAATGATTCAGCCAGACTCATACGGAGCATTGAACAAACCATGGTCAGTAAGCCAACGGATTTTGAAA
AGCTTGACACTACATGCACCAGTTCAAGGGCAGTAGCTCAAGGGGTGACTGATGCATCTCACAGTTTAGAGAATACTGCTTGGCAGGCAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTCAAACCTTTTGCAACGTCAAGTTGCCTACACGAAGAGGTGCTTTTTTGAGCAGGGTTATCTTGATCGTGATCAATTCACTCAGCTTGAAGAACTGCAAGATGA
TGCCTACCCGAATTTTGCTGAAGAAATTGTGTCTTTATTCTACAATGATTCAGCCAGACTCATACGGAGCATTGAACAAACCATGGTCAGTAAGCCAACGGATTTTGAAA
AGCTTGACACTACATGCACCAGTTCAAGGGCAGTAGCTCAAGGGGTGACTGATGCATCTCACAGTTTAGAGAATACTGCTTGGCAGGCAATCTGA
Protein sequenceShow/hide protein sequence
MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDAYPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDTTCTSSRAVAQGVTDASHSLENTAWQAI