CuGenDBv2

Gene ID	Clc08G12800
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	two-on-two hemoglobin-3
Genome location	ClcChr08:24047925..24051263
RNA-Seq Expression	Clc08G12800
Synteny	Clc08G12800
Gene Ontology terms	GO:0015671 - oxygen transport (biological process) GO:0005344 - oxygen carrier activity (molecular function) GO:0019825 - oxygen binding (molecular function) GO:0020037 - heme binding (molecular function)
InterPro domains	IPR001486 - Truncated hemoglobin IPR009050 - Globin-like superfamily IPR012292 - Globin/Protoglobin IPR044203 - Two-on-two hemoglobin-3

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6598792.1 Two-on-two hemoglobin-3, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-62

78.66

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Query:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---
        MQSLQDKASEWSGV+REDAFAIDEVNLFQKLGLQT VNLSTKFYN                 RVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG   
Subjt:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---

Query:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG
              GHPALIGRHRPFPVTHRAAERWLHHMQLALDETP+IDADSKVRMTNFF+HT   L  G
Subjt:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG

XP_008445043.1 PREDICTED: two-on-two hemoglobin-3 isoform X2 [Cucumis melo]

1.3e-61

77.44

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Query:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---
        MQSLQDKASEWSGV+REDAFAIDEVNLFQKLGLQTFV LSTKFYN                 RVYDD+EEWFRSIFGNSKKEDAIQNQYEFFVQRMG   
Subjt:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---

Query:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG
              GHPALIGRHRPFPVTHRAAERWLHHMQLALDETP+IDADSKVRM NFF+HT   L  G
Subjt:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG

XP_022962612.1 two-on-two hemoglobin-3 [Cucurbita moschata]

6.8e-63

78.66

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Query:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---
        MQSLQDKASEWSGV+REDAFAIDEVNLFQKLGLQTFVNLSTKFYN                 RVYD+EEEWFRSIFGNSKKEDAIQNQYEFFVQRMG   
Subjt:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---

Query:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG
              GHPALIGRHRPFPVTHRAAERWLHHMQLALDETP+IDADSKVRMTNFF+HT   L  G
Subjt:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG

XP_022996482.1 two-on-two hemoglobin-3 [Cucurbita maxima]

6.8e-63

78.66

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Query:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---
        MQSLQDKASEWSGV+REDAFAIDEVNLFQKLGLQTFVNLSTKFYN                 RVYD+EEEWFRSIFGNSKKEDAIQNQYEFFVQRMG   
Subjt:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---

Query:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG
              GHPALIGRHRPFPVTHRAAERWLHHMQLALDETP+IDADSKVRMTNFF+HT   L  G
Subjt:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG

XP_023545796.1 two-on-two hemoglobin-3 [Cucurbita pepo subsp. pepo]

2.4e-63

79.27

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Query:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---
        MQSLQDKASEWSGV+REDAFAIDEVNLFQKLGLQTFVNLSTKFYN                 RVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG   
Subjt:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---

Query:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG
              GHPALIGRHRPFPVTHRAAERWLHHMQLALDETP+IDADSKVRMTNFF+HT   L  G
Subjt:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPU3 Uncharacterized protein

4.0e-61

76.83

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Query:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---
        MQSLQDKASEWSGV+REDAFAIDEVNLFQKLGLQTFVNLSTKFYN                 RVYDD+EEWFRSIFGNSKKEDAIQNQYEFFVQRMG   
Subjt:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---

Query:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG
              GHPALIGRHRPFPVTHRAAERWLHHMQLALDETP+IDADSK RM  FF+HT   L  G
Subjt:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG

A0A1S3BCI0 two-on-two hemoglobin-3 isoform X2

6.2e-62

77.44

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Query:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---
        MQSLQDKASEWSGV+REDAFAIDEVNLFQKLGLQTFV LSTKFYN                 RVYDD+EEWFRSIFGNSKKEDAIQNQYEFFVQRMG   
Subjt:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---

Query:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG
              GHPALIGRHRPFPVTHRAAERWLHHMQLALDETP+IDADSKVRM NFF+HT   L  G
Subjt:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG

A0A5A7VA21 Two-on-two hemoglobin-3 isoform X2

8.2e-62

77.44

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Query:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---
        MQSLQDKASEWSGV+REDAFAIDEVNLFQKLGLQTFV LSTKFYN                 RVYD+EEEWFRSIFGNSKKEDAIQNQYEFFVQRMG   
Subjt:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---

Query:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG
              GHPALIGRHRPFPVTHRAAERWLHHMQLALDETP+IDADSKVRM NFF+HT   L  G
Subjt:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG

A0A6J1HD51 two-on-two hemoglobin-3

3.3e-63

78.66

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Query:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---
        MQSLQDKASEWSGV+REDAFAIDEVNLFQKLGLQTFVNLSTKFYN                 RVYD+EEEWFRSIFGNSKKEDAIQNQYEFFVQRMG   
Subjt:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---

Query:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG
              GHPALIGRHRPFPVTHRAAERWLHHMQLALDETP+IDADSKVRMTNFF+HT   L  G
Subjt:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG

A0A6J1K220 two-on-two hemoglobin-3

3.3e-63

78.66

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Query:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---
        MQSLQDKASEWSGV+REDAFAIDEVNLFQKLGLQTFVNLSTKFYN                 RVYD+EEEWFRSIFGNSKKEDAIQNQYEFFVQRMG   
Subjt:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---

Query:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG
              GHPALIGRHRPFPVTHRAAERWLHHMQLALDETP+IDADSKVRMTNFF+HT   L  G
Subjt:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRG

SwissProt top hits

e value

%identity

Alignment

Q67XG0 Two-on-two hemoglobin-3

2.5e-52

61.45

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Query:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---
        MQSLQDKAS  SGV++ +AFAIDE NLF KLGLQTF+NLST FY                 TRVYDDEEEWF+SIF NS KEDAIQNQYEFFVQRMG   
Subjt:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---

Query:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRGWR-SDEESKPANSMQ
              GHPALIGRHRPFPVTH+AAERWL HMQ ALD++ +ID DSK++M  FF+HT   L  G    ++  KP +  Q
Subjt:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRGWR-SDEESKPANSMQ

Arabidopsis top hits

e value

%identity

Alignment

AT4G32690.1 hemoglobin 3

1.8e-53

61.45

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Query:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---
        MQSLQDKAS  SGV++ +AFAIDE NLF KLGLQTF+NLST FY                 TRVYDDEEEWF+SIF NS KEDAIQNQYEFFVQRMG   
Subjt:  MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMG---

Query:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRGWR-SDEESKPANSMQ
              GHPALIGRHRPFPVTH+AAERWL HMQ ALD++ +ID DSK++M  FF+HT   L  G    ++  KP +  Q
Subjt:  ------GHPALIGRHRPFPVTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRGWR-SDEESKPANSMQ

Sequences

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CDS sequence

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ATGCAGAGTTTGCAAGATAAGGCTTCCGAGTGGAGCGGAGTGGAGCGTGAAGATGCCTTCGCCATCGACGAAGTCAATTTGTTTCAGAAGTTAGGTCTCCAGACGTTTGT
TAATCTATCGACCAAATTCTATAACAAGTCTGTTTCTGTTCATCAATGCAGCATGCGGCATGCGCGAATGAATACTAGGGTATATGACGACGAGGAGGAGTGGTTCCGAT
CAATTTTTGGGAATTCGAAGAAAGAGGATGCAATTCAAAATCAGTACGAGTTCTTCGTGCAAAGAATGGGAGGCCATCCAGCTCTTATAGGTCGACACCGACCATTCCCG
GTCACACATAGAGCGGCAGAGAGATGGTTACATCACATGCAACTAGCGTTAGACGAGACTCCAGAAATAGATGCAGATTCAAAAGTCAGAATGACAAACTTCTTCAAGCA
TACACACAACCTTCTTTCTCGTGGCTGGAGATCAGATGAAGAATCAAAACCTGCAAACTCAATGCAAGCACGGTATTCAGCAATCTGA

mRNA sequence

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Protein sequence

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MQSLQDKASEWSGVEREDAFAIDEVNLFQKLGLQTFVNLSTKFYNKSVSVHQCSMRHARMNTRVYDDEEEWFRSIFGNSKKEDAIQNQYEFFVQRMGGHPALIGRHRPFP
VTHRAAERWLHHMQLALDETPEIDADSKVRMTNFFKHTHNLLSRGWRSDEESKPANSMQARYSAI

Clc08G12800 (gene) of Watermelon (cordophanus) v2 genome