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Clc08G13655 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G13655
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPlant protein of unknown function (DUF247)
Genome locationClcChr08:24766307..24766705
RNA-Seq ExpressionClc08G13655
SyntenyClc08G13655
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131634.1 UPF0481 protein At3g47200-like [Momordica charantia]1.4e-2051.49Show/hide
Query:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSM-ATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVEL
        SI RVPK+LL MN KAY P+VI+IGP HH  + ++  TQ  K    ++YLHR  + VE +V + ++WE  AR CY +PI MN+  FV M+LLDGCF+V  
Subjt:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSM-ATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVEL

Query:  L
        L
Subjt:  L

XP_022132118.1 UPF0481 protein At3g47200-like [Momordica charantia]8.3e-2154.37Show/hide
Query:  ICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELLK
        I RVPK+L  M   AY P+VI IGP HH + D +ATQ  K  CF  YL R    V+ +VA+A+ WE +AR  YA+PINM S DFV+MML+D CFIVEL+ 
Subjt:  ICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELLK

Query:  KIN
         +N
Subjt:  KIN

XP_022158989.1 UPF0481 protein At3g47200-like isoform X1 [Momordica charantia]9.8e-2251.46Show/hide
Query:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELL
        +I RVP++LL  N +AY+P++I+IGP HH ++D M  +  K    + YL RTN  +E  V + +SWE  AR CYA+PINM+S +FVKMML+DGCFIVEL+
Subjt:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELL

Query:  KKI
          +
Subjt:  KKI

XP_022158990.1 UPF0481 protein At3g47200-like isoform X2 [Momordica charantia]9.8e-2251.46Show/hide
Query:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELL
        +I RVP++LL  N +AY+P++I+IGP HH ++D M  +  K    + YL RTN  +E  V + +SWE  AR CYA+PINM+S +FVKMML+DGCFIVEL+
Subjt:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELL

Query:  KKI
          +
Subjt:  KKI

XP_022158992.1 UPF0481 protein At3g47200-like isoform X3 [Momordica charantia]9.8e-2251.46Show/hide
Query:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELL
        +I RVP++LL  N +AY+P++I+IGP HH ++D M  +  K    + YL RTN  +E  V + +SWE  AR CYA+PINM+S +FVKMML+DGCFIVEL+
Subjt:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELL

Query:  KKI
          +
Subjt:  KKI

TrEMBL top hitse value%identityAlignment
A0A6J1BQT6 UPF0481 protein At3g47200-like6.9e-2151.49Show/hide
Query:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSM-ATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVEL
        SI RVPK+LL MN KAY P+VI+IGP HH  + ++  TQ  K    ++YLHR  + VE +V + ++WE  AR CY +PI MN+  FV M+LLDGCF+V  
Subjt:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSM-ATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVEL

Query:  L
        L
Subjt:  L

A0A6J1BVD4 UPF0481 protein At3g47200-like4.0e-2154.37Show/hide
Query:  ICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELLK
        I RVPK+L  M   AY P+VI IGP HH + D +ATQ  K  CF  YL R    V+ +VA+A+ WE +AR  YA+PINM S DFV+MML+D CFIVEL+ 
Subjt:  ICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELLK

Query:  KIN
         +N
Subjt:  KIN

A0A6J1DXD6 UPF0481 protein At3g47200-like isoform X24.8e-2251.46Show/hide
Query:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELL
        +I RVP++LL  N +AY+P++I+IGP HH ++D M  +  K    + YL RTN  +E  V + +SWE  AR CYA+PINM+S +FVKMML+DGCFIVEL+
Subjt:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELL

Query:  KKI
          +
Subjt:  KKI

A0A6J1DYL4 UPF0481 protein At3g47200-like isoform X34.8e-2251.46Show/hide
Query:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELL
        +I RVP++LL  N +AY+P++I+IGP HH ++D M  +  K    + YL RTN  +E  V + +SWE  AR CYA+PINM+S +FVKMML+DGCFIVEL+
Subjt:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELL

Query:  KKI
          +
Subjt:  KKI

A0A6J1E120 UPF0481 protein At3g47200-like isoform X14.8e-2251.46Show/hide
Query:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELL
        +I RVP++LL  N +AY+P++I+IGP HH ++D M  +  K    + YL RTN  +E  V + +SWE  AR CYA+PINM+S +FVKMML+DGCFIVEL+
Subjt:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELL

Query:  KKI
          +
Subjt:  KKI

SwissProt top hitse value%identityAlignment
Q9SD53 UPF0481 protein At3g472001.4e-0732.32Show/hide
Query:  ICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYL---HRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIV
        I RVP+  + +N KAY P+V++IGP H+ +K     Q  KP     +L    + +++   +V      E + R  Y++ +    +D + MM+LDGCFI+
Subjt:  ICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYL---HRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIV

Arabidopsis top hitse value%identityAlignment
AT2G36430.1 Plant protein of unknown function (DUF247)1.1e-1540Show/hide
Query:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRT-NLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVEL
        SI RVP+ ++  N + Y P V++IGP H  +      +  K    N  L RT NL +E  +   K+ E+ AR CY++ I+M+S +F +MM+LDGCF++EL
Subjt:  SICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRT-NLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVEL

Query:  LKKIN
         +K+N
Subjt:  LKKIN

AT3G50120.1 Plant protein of unknown function (DUF247)1.9e-1536Show/hide
Query:  ICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELLK
        I RVP  L   + K+Y P+ +++GP HH KK   +    K    N  L RTN  ++  +   +  E++AR CY  P++++S +F++M++LDGCF++EL +
Subjt:  ICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELLK

AT3G50150.1 Plant protein of unknown function (DUF247)3.3e-1540.59Show/hide
Query:  ICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINM-NSYDFVKMMLLDGCFIVELL
        I RVP  L   + K+Y+P+ ++IGP HH K      +  K    N  + RT   +E  +   K  E+EAR CY  PI+M NS +F +M++LDGCF++EL 
Subjt:  ICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINM-NSYDFVKMMLLDGCFIVELL

Query:  K
        K
Subjt:  K

AT3G50160.1 Plant protein of unknown function (DUF247)1.7e-1638.46Show/hide
Query:  NNRSICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIV
        +N  I RVP  L   + K+Y+P++++IGP HH  K  M  +  K    N  + R    +E  +   K  E++AR CY  PINMN  +F++M++LDG FI+
Subjt:  NNRSICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIV

Query:  ELLK
        E+ K
Subjt:  ELLK

AT4G31980.1 unknown protein2.0e-1738.38Show/hide
Query:  ICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELL
        I +VP +L  +N  AY P +++ GP H  K++  A +  K     +++ RTN  +E +V +A++WE+ AR CYA+ + ++S +FV+M+++DG F+VELL
Subjt:  ICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDFVKMMLLDGCFIVELL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGGTTGAAGAGTGCTTGTGTAGGTTGGCCCTTGAGAAATCCATACGAAAGTTATTACACCAACAACCGGAGCATCTGTCGGGTTCCCAAACAACTACTCTACAT
GAATTATAAAGCATATATTCCTGAAGTGATTACCATTGGGCCTTCTCACCATTATAAAAAGGATTCTATGGCCACACAAGCCCTTAAACCCCTATGTTTCAATGCTTATC
TACACCGTACAAATTTGAAAGTTGAGGGCATCGTAGCCATGGCTAAAAGTTGGGAGAAGGAAGCTCGTTGTTGCTATGCACAACCCATAAACATGAACAGTTATGATTTC
GTCAAAATGATGCTTCTTGATGGTTGTTTCATAGTGGAGCTTTTAAAAAAAATTAATACCAAATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAGGTTGAAGAGTGCTTGTGTAGGTTGGCCCTTGAGAAATCCATACGAAAGTTATTACACCAACAACCGGAGCATCTGTCGGGTTCCCAAACAACTACTCTACAT
GAATTATAAAGCATATATTCCTGAAGTGATTACCATTGGGCCTTCTCACCATTATAAAAAGGATTCTATGGCCACACAAGCCCTTAAACCCCTATGTTTCAATGCTTATC
TACACCGTACAAATTTGAAAGTTGAGGGCATCGTAGCCATGGCTAAAAGTTGGGAGAAGGAAGCTCGTTGTTGCTATGCACAACCCATAAACATGAACAGTTATGATTTC
GTCAAAATGATGCTTCTTGATGGTTGTTTCATAGTGGAGCTTTTAAAAAAAATTAATACCAAATCTTAG
Protein sequenceShow/hide protein sequence
MMRLKSACVGWPLRNPYESYYTNNRSICRVPKQLLYMNYKAYIPEVITIGPSHHYKKDSMATQALKPLCFNAYLHRTNLKVEGIVAMAKSWEKEARCCYAQPINMNSYDF
VKMMLLDGCFIVELLKKINTKS