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Clc08G14435 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G14435
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionGlutamate receptor
Genome locationClcChr08:25385130..25385754
RNA-Seq ExpressionClc08G14435
SyntenyClc08G14435
Gene Ontology termsGO:0006811 - ion transport (biological process)
GO:0009987 - cellular process (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0015276 - ligand-gated ion channel activity (molecular function)
GO:0038023 - signaling receptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131927.1 glutamate receptor 2.8-like isoform X1 [Momordica charantia]4.9e-0953.73Show/hide
Query:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN
        T  + VGV++DL++W G+MSLSCI MS SDFY S   HN TI LHIR SK D + A AQ   + + N
Subjt:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN

XP_022131949.1 glutamate receptor 2.8-like isoform X2 [Momordica charantia]4.9e-0953.73Show/hide
Query:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN
        T  + VGV++DL++W G+MSLSCI MS SDFY S   HN TI LHIR SK D + A AQ   + + N
Subjt:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN

XP_022131950.1 glutamate receptor 2.8-like isoform X3 [Momordica charantia]4.9e-0953.73Show/hide
Query:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN
        T  + VGV++DL++W G+MSLSCI MS SDFY S   HN TI LHIR SK D + A AQ   + + N
Subjt:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN

XP_022131955.1 glutamate receptor 2.9-like isoform X7 [Momordica charantia]4.9e-0953.73Show/hide
Query:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN
        T  + VGV++DL++W G+MSLSCI MS SDFY S   HN TI LHIR SK D + A AQ   + + N
Subjt:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN

XP_022131956.1 glutamate receptor 2.9-like isoform X8 [Momordica charantia]4.9e-0953.73Show/hide
Query:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN
        T  + VGV++DL++W G+MSLSCI MS SDFY S   HN TI LHIR SK D + A AQ   + + N
Subjt:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN

TrEMBL top hitse value%identityAlignment
A0A6J1BQX0 Glutamate receptor2.4e-0953.73Show/hide
Query:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN
        T  + VGV++DL++W G+MSLSCI MS SDFY S   HN TI LHIR SK D + A AQ   + + N
Subjt:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN

A0A6J1BR30 Glutamate receptor2.4e-0953.73Show/hide
Query:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN
        T  + VGV++DL++W G+MSLSCI MS SDFY S   HN TI LHIR SK D + A AQ   + + N
Subjt:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN

A0A6J1BR39 Glutamate receptor2.4e-0953.73Show/hide
Query:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN
        T  + VGV++DL++W G+MSLSCI MS SDFY S   HN TI LHIR SK D + A AQ   + + N
Subjt:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN

A0A6J1BR43 Glutamate receptor2.4e-0953.73Show/hide
Query:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN
        T  + VGV++DL++W G+MSLSCI MS SDFY S   HN TI LHIR SK D + A AQ   + + N
Subjt:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN

A0A6J1BRP4 Glutamate receptor2.4e-0953.73Show/hide
Query:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN
        T  + VGV++DL++W G+MSLSCI MS SDFY S   HN TI LHIR SK D + A AQ   + + N
Subjt:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPN

SwissProt top hitse value%identityAlignment
O04660 Glutamate receptor 2.14.9e-0440.35Show/hide
Query:  MKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA
        + VG++ D+ T +  M+L CI MS SDFY+SH      +   +  SK D + AAA A
Subjt:  MKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA

O81078 Glutamate receptor 2.94.3e-0848.33Show/hide
Query:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA
        T  +KVGV++DLNT F ++ L+ IKM+ SDFYA H N+   ++LH+R S  D + A+A A
Subjt:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA

Q8LGN0 Glutamate receptor 2.76.9e-0641.67Show/hide
Query:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA
        T  +KVGV++DL+T F ++ L+ I +S SDFY  HS++   +++HIR S  D + A++ A
Subjt:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA

Q9C5V5 Glutamate receptor 2.86.2e-0743.86Show/hide
Query:  MKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA
        +KVGV++DLNT F ++ L+ I ++ SDFY  H N+   ++LH+R S  D + A+A A
Subjt:  MKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA

Arabidopsis top hitse value%identityAlignment
AT2G29100.1 glutamate receptor 2.93.1e-0948.33Show/hide
Query:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA
        T  +KVGV++DLNT F ++ L+ IKM+ SDFYA H N+   ++LH+R S  D + A+A A
Subjt:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA

AT2G29110.1 glutamate receptor 2.84.4e-0843.86Show/hide
Query:  MKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA
        +KVGV++DLNT F ++ L+ I ++ SDFY  H N+   ++LH+R S  D + A+A A
Subjt:  MKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA

AT2G29120.1 glutamate receptor 2.74.9e-0741.67Show/hide
Query:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA
        T  +KVGV++DL+T F ++ L+ I +S SDFY  HS++   +++HIR S  D + A++ A
Subjt:  TMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA

AT5G27100.1 glutamate receptor 2.13.5e-0540.35Show/hide
Query:  MKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA
        + VG++ D+ T +  M+L CI MS SDFY+SH      +   +  SK D + AAA A
Subjt:  MKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA

AT5G48410.1 glutamate receptor 1.37.8e-0533.33Show/hide
Query:  MKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA
        ++VG+++DL +  G++  + + M+ S FYA H+++   +S+ +R+S  +PL+A A A
Subjt:  MKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGACAATGGGAATGAAGGTGGGAGTGATTGTGGATTTGAATACTTGGTTTGGACAAATGAGTTTGAGTTGCATCAAAATGTCTTTCTCTGATTTTTATGCTTC
TCATTCAAATCACAACCAAACCATTTCTCTTCATATAAGACATTCCAAAGCTGATCCTCTCATAGCTGCAGCTCAAGCGGAGTTGGTTTTTCGACCAAACTACCACCGGA
CCGACTATGGTCGGTTTAATAAATGTTCAAACCGACCTCGACCATCAATGAATGAAAATTGGCCTTTGGTTGGTCGATTTAGGTCAAAAAATGCCAGTTTGAAATTTTCT
CAAACCAACACCGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATGACAATGGGAATGAAGGTGGGAGTGATTGTGGATTTGAATACTTGGTTTGGACAAATGAGTTTGAGTTGCATCAAAATGTCTTTCTCTGATTTTTATGCTTC
TCATTCAAATCACAACCAAACCATTTCTCTTCATATAAGACATTCCAAAGCTGATCCTCTCATAGCTGCAGCTCAAGCGGAGTTGGTTTTTCGACCAAACTACCACCGGA
CCGACTATGGTCGGTTTAATAAATGTTCAAACCGACCTCGACCATCAATGAATGAAAATTGGCCTTTGGTTGGTCGATTTAGGTCAAAAAATGCCAGTTTGAAATTTTCT
CAAACCAACACCGACTGA
Protein sequenceShow/hide protein sequence
MEMTMGMKVGVIVDLNTWFGQMSLSCIKMSFSDFYASHSNHNQTISLHIRHSKADPLIAAAQAELVFRPNYHRTDYGRFNKCSNRPRPSMNENWPLVGRFRSKNASLKFS
QTNTD