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Clc08G14940 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G14940
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSAUR-like auxin-responsive protein family
Genome locationClcChr08:25843844..25844170
RNA-Seq ExpressionClc08G14940
SyntenyClc08G14940
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups (molecular function)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598492.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3983.65Show/hide
Query:  AVVKQIKKRCSGLRINKNKNTNHQCGG------GEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFESLT
        AVVKQI KRCSGLR NKNKN   QCGG      GEIPVDVPKGHFVVYVSENRSRYIVPLT L+ PEFQILLQLAEEEFGF H+MGLTIPCEEQVF+SLT
Subjt:  AVVKQIKKRCSGLRINKNKNTNHQCGG------GEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFESLT

Query:  SMLR
        SMLR
Subjt:  SMLR

XP_004152658.1 auxin-responsive protein SAUR50 [Cucumis sativus]8.8e-4586.09Show/hide
Query:  MAVSTKLTQTAVVKQIKKRCSGLRI------NKNKNTNHQCGGG-EIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTI
        MAVSTKLT TAVVKQIKKRCS LRI      N N NT+ QCGGG EIPVDVPKGHFVVYVSENRSRYIVPLTFL+RPEFQILLQLAEEEFGF HNMGLTI
Subjt:  MAVSTKLTQTAVVKQIKKRCSGLRI------NKNKNTNHQCGGG-EIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTI

Query:  PCEEQVFESLTSMLR
        PCEEQVF+SLTSMLR
Subjt:  PCEEQVFESLTSMLR

XP_008444786.1 PREDICTED: auxin-induced protein 15A-like [Cucumis melo]6.3e-4383.76Show/hide
Query:  MAVSTKLTQTAVVKQIKKRCSGLRI-------NKNKNTNH-QCGGG--EIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMG
        MAVSTKLT TAVVKQIKKRCS LRI       N N NT+H QCGGG  EIPVDVPKGHFVVYVSENRSRYIVPLTFL+RPEFQILLQLAEEEFGF H MG
Subjt:  MAVSTKLTQTAVVKQIKKRCSGLRI-------NKNKNTNH-QCGGG--EIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMG

Query:  LTIPCEEQVFESLTSML
        LTIPCEEQVF SLTSML
Subjt:  LTIPCEEQVFESLTSML

XP_022997035.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]9.5e-3983.5Show/hide
Query:  AVVKQIKKRCSGLRINKNKNTNHQCGG------GEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFESLT
        AVVKQI KRCSGLR NKNKN   QCGG      GEIPVDVPKGHFVVYVSENRSRYIVPLT L+ PEFQILLQLAEEEFGF H+MGLTIPCEEQVF+SLT
Subjt:  AVVKQIKKRCSGLRINKNKNTNHQCGG------GEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFESLT

Query:  SML
        SML
Subjt:  SML

XP_038886317.1 auxin-responsive protein SAUR50-like [Benincasa hispida]1.3e-4893.58Show/hide
Query:  MAVSTKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGG-EIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQV
        MAVSTKLTQTAVVKQIKKRCS LRINKNKNT+ QCGGG EIPVDVPKGHFVVYVSENRSRYIVPLTFL+RPEFQILLQLAEEEFGF+HNMGLTIPCEEQV
Subjt:  MAVSTKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGG-EIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQV

Query:  FESLTSMLR
        F+SLTSMLR
Subjt:  FESLTSMLR

TrEMBL top hitse value%identityAlignment
A0A0A0LRM7 Uncharacterized protein4.3e-4586.09Show/hide
Query:  MAVSTKLTQTAVVKQIKKRCSGLRI------NKNKNTNHQCGGG-EIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTI
        MAVSTKLT TAVVKQIKKRCS LRI      N N NT+ QCGGG EIPVDVPKGHFVVYVSENRSRYIVPLTFL+RPEFQILLQLAEEEFGF HNMGLTI
Subjt:  MAVSTKLTQTAVVKQIKKRCSGLRI------NKNKNTNHQCGGG-EIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTI

Query:  PCEEQVFESLTSMLR
        PCEEQVF+SLTSMLR
Subjt:  PCEEQVFESLTSMLR

A0A1S3BB62 auxin-induced protein 15A-like3.1e-4383.76Show/hide
Query:  MAVSTKLTQTAVVKQIKKRCSGLRI-------NKNKNTNH-QCGGG--EIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMG
        MAVSTKLT TAVVKQIKKRCS LRI       N N NT+H QCGGG  EIPVDVPKGHFVVYVSENRSRYIVPLTFL+RPEFQILLQLAEEEFGF H MG
Subjt:  MAVSTKLTQTAVVKQIKKRCSGLRI-------NKNKNTNH-QCGGG--EIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMG

Query:  LTIPCEEQVFESLTSML
        LTIPCEEQVF SLTSML
Subjt:  LTIPCEEQVFESLTSML

A0A5A7VD05 Auxin-induced protein 15A-like3.1e-4383.76Show/hide
Query:  MAVSTKLTQTAVVKQIKKRCSGLRI-------NKNKNTNH-QCGGG--EIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMG
        MAVSTKLT TAVVKQIKKRCS LRI       N N NT+H QCGGG  EIPVDVPKGHFVVYVSENRSRYIVPLTFL+RPEFQILLQLAEEEFGF H MG
Subjt:  MAVSTKLTQTAVVKQIKKRCSGLRI-------NKNKNTNH-QCGGG--EIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMG

Query:  LTIPCEEQVFESLTSML
        LTIPCEEQVF SLTSML
Subjt:  LTIPCEEQVFESLTSML

A0A6J1HE76 auxin-responsive protein SAUR50-like6.0e-3979.09Show/hide
Query:  AVVKQIKKRCSGLRINKNKNTNHQCGG------------GEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQ
        AVVKQI KRCSGLR NKNKN   QCGG            GEIPVDVPKGHFVVYVSENRSRYIVPLT L+ PEFQILLQLAEEEFGF H+MGLTIPCEEQ
Subjt:  AVVKQIKKRCSGLRINKNKNTNHQCGG------------GEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQ

Query:  VFESLTSMLR
        VF+SLTSMLR
Subjt:  VFESLTSMLR

A0A6J1K8F3 auxin-responsive protein SAUR50-like4.6e-3983.5Show/hide
Query:  AVVKQIKKRCSGLRINKNKNTNHQCGG------GEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFESLT
        AVVKQI KRCSGLR NKNKN   QCGG      GEIPVDVPKGHFVVYVSENRSRYIVPLT L+ PEFQILLQLAEEEFGF H+MGLTIPCEEQVF+SLT
Subjt:  AVVKQIKKRCSGLRINKNKNTNHQCGG------GEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFESLT

Query:  SML
        SML
Subjt:  SML

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR501.4e-3263.89Show/hide
Query:  MAVSTKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGGEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVF
        M  ++KLTQTA++KQI KRCS L        +  C    +P+DVPKGHF VYV ENRSRYIVP++FL+ PEFQ LLQ AEEEFGFDH+MGLTIPC+E VF
Subjt:  MAVSTKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGGEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVF

Query:  ESLTSMLR
        ++LTSM+R
Subjt:  ESLTSMLR

P0DKL1 Auxin-responsive protein SAUR502.4e-2150.96Show/hide
Query:  STKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGGEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFESL
        S K TQ   +K+I K+CS    N + +         +P DVPKGHFVVYV E R+RYIVP++ L  P FQ LLQ +EEEFGF+H+MG+ IPC+E  F S 
Subjt:  STKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGGEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFESL

Query:  TSML
         SM+
Subjt:  TSML

P33081 Auxin-induced protein 15A1.2e-1556.06Show/hide
Query:  DVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNM-GLTIPCEEQVFESLTSML
        D PKG+  VYV E   R+++P+++L++P FQ LL  AEEEFG+DH M GLTIPC E VF+ +TS L
Subjt:  DVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNM-GLTIPCEEQVFESLTSML

P33082 Auxin-induced protein X151.5e-1553.73Show/hide
Query:  VDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNM-GLTIPCEEQVFESLTSML
        VD PKG+  VYV E   R+++P++++++P FQ LL  AEEEFG+DH M GLTIPC E+VF+ +T  L
Subjt:  VDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNM-GLTIPCEEQVFESLTSML

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 101.6e-2862.38Show/hide
Query:  TQTAVVKQIKKRCSGLRINKNKNTNHQCGGGEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFESLTSML
        +Q A +KQI KRCS LR  KN N  +     ++P DVPKGHF VYV  NRSRYIVP+++L   EFQ LL+LAEEEFGFDH+MGLTIPC+E  F SL SM 
Subjt:  TQTAVVKQIKKRCSGLRINKNKNTNHQCGGGEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFESLTSML

Query:  R
        R
Subjt:  R

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family7.5e-3464.49Show/hide
Query:  TKLTQTAVVKQIKKRCS--GLRINKNKNTNHQCGGGEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFES
        +KLTQT ++KQI KRCS  G + +   N  H+  G  +P+DVPKGHFVVYV  NR RY++P++FL+RPEFQ+LLQ AEEEFGFDHNMGLTIPCEE  F+S
Subjt:  TKLTQTAVVKQIKKRCS--GLRINKNKNTNHQCGGGEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFES

Query:  L-TSMLR
        L TSML+
Subjt:  L-TSMLR

AT1G75580.1 SAUR-like auxin-responsive protein family2.0e-3467.59Show/hide
Query:  MAVSTKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGGEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVF
        M  + KLTQTA++KQI KRCS L   K  N   +   G  P++VPKGHFVVYV ENR RY+VP++FL+RPEFQ+LLQ AEEEFGFDH+MGLTIPCEE VF
Subjt:  MAVSTKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGGEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVF

Query:  ESLTSMLR
         SLTSMLR
Subjt:  ESLTSMLR

AT2G16580.1 SAUR-like auxin-responsive protein family5.0e-3061.47Show/hide
Query:  STKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGG----EIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQV
        STKL QTA+++QI KRCS L     KN     GGG    ++P+DVPKGHF VYV  NRSRYIVP++FL+  +FQ LL+ AEEEFGFDH+MGLTIPC+E  
Subjt:  STKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGG----EIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQV

Query:  FESLTSMLR
        F+ LTSM+R
Subjt:  FESLTSMLR

AT2G21220.1 SAUR-like auxin-responsive protein family1.2e-3165.71Show/hide
Query:  STKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGGE-IPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFES
        S+KLTQTA++KQI KRCS L  N       QC   + +PVDVPKGHF VYV E RSRYIVP++FL+ P+F+ LLQ AEEEFGF+H+MGLTIPCEE VF S
Subjt:  STKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGGE-IPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFES

Query:  LTSML
        LTSM+
Subjt:  LTSML

AT4G34760.1 SAUR-like auxin-responsive protein family9.8e-3463.89Show/hide
Query:  MAVSTKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGGEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVF
        M  ++KLTQTA++KQI KRCS L        +  C    +P+DVPKGHF VYV ENRSRYIVP++FL+ PEFQ LLQ AEEEFGFDH+MGLTIPC+E VF
Subjt:  MAVSTKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGGEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVF

Query:  ESLTSMLR
        ++LTSM+R
Subjt:  ESLTSMLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGTCCACCAAACTGACGCAGACGGCGGTGGTGAAGCAAATTAAGAAGCGGTGTTCGGGTTTGAGAATCAACAAGAATAAGAATACTAACCACCAATGCGGCGG
CGGAGAGATTCCGGTGGATGTTCCGAAAGGGCATTTTGTGGTGTATGTGAGTGAAAATAGAAGCCGTTACATTGTGCCGCTCACGTTTTTGAGCAGGCCGGAGTTTCAAA
TTCTTCTCCAATTGGCTGAGGAGGAGTTCGGGTTCGATCATAATATGGGCCTCACTATCCCTTGTGAGGAGCAAGTGTTTGAATCTCTTACTTCCATGCTCCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTGTCCACCAAACTGACGCAGACGGCGGTGGTGAAGCAAATTAAGAAGCGGTGTTCGGGTTTGAGAATCAACAAGAATAAGAATACTAACCACCAATGCGGCGG
CGGAGAGATTCCGGTGGATGTTCCGAAAGGGCATTTTGTGGTGTATGTGAGTGAAAATAGAAGCCGTTACATTGTGCCGCTCACGTTTTTGAGCAGGCCGGAGTTTCAAA
TTCTTCTCCAATTGGCTGAGGAGGAGTTCGGGTTCGATCATAATATGGGCCTCACTATCCCTTGTGAGGAGCAAGTGTTTGAATCTCTTACTTCCATGCTCCGATAA
Protein sequenceShow/hide protein sequence
MAVSTKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGGEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFESLTSMLR