; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G15210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G15210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptiondehydration-responsive element-binding protein 2D
Genome locationClcChr08:26068810..26069705
RNA-Seq ExpressionClc08G15210
SyntenyClc08G15210
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598473.1 Dehydration-responsive element-binding protein 2D, partial [Cucurbita argyrosperma subsp. sororia]3.3e-6466.67Show/hide
Query:  MLKSSSNNNKRPS-----SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSP-VS
        MLKSS    + PS     SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAA+AYDNAARRLYGS+AKLNLPHLSP + 
Subjt:  MLKSSSNNNKRPS-----SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSP-VS

Query:  ASSSSSDNVAANSNSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHHQGFFAANLM
          +       + S+S+ +A A VEDV S  S   +N    S + RF EEEEE+IGGLWR+MSISLDDSIW EAAMSLDFP+V    +D   QG FAA+ +
Subjt:  ASSSSSDNVAANSNSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHHQGFFAANLM

Query:  ETNGNGGCGWDTLQWC
        ++N     GWDTLQWC
Subjt:  ETNGNGGCGWDTLQWC

XP_008444762.1 PREDICTED: dehydration-responsive element-binding protein 2D [Cucumis melo]8.0e-6669.23Show/hide
Query:  MLKSSSN---NNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLP------HLS
        MLKS S+   NNK+ SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS+DAALAYDNAARRLYGSDAKLNLP       +S
Subjt:  MLKSSSN---NNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLP------HLS

Query:  PVSASSSSSDN------VAANSNSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHH
          S+SS++SDN      VA  S  N+  N +VEDVASS S  +NN       KRFRE+EEEQIGGLWRAMSISLDDSIWVEAAMSLDFP++ME       
Subjt:  PVSASSSSSDN------VAANSNSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHH

Query:  QGFFAANLMETNGNGGCGWDT
        Q  F+ NL++TN N   GWD+
Subjt:  QGFFAANLMETNGNGGCGWDT

XP_011649643.1 dehydration-responsive element-binding protein 2D [Cucumis sativus]1.0e-6567.7Show/hide
Query:  MLKSSSN---NNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLS---PVS
        MLKS S+   NNK+ SSRKGCMRGKGGPENA CTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLP +S    VS
Subjt:  MLKSSSN---NNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLS---PVS

Query:  ASSSSSDNVAANSNSNS----------NANAIVEDVASSVSHETNNNNTVSPKKRFRE-EEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDH
         SSSSS   + N+N+NS          + N  VEDVASS        +++S  KRFRE E++EQIGGLWRAMSISLDDSIWVEAAMSLDFP++ME     
Subjt:  ASSSSSDNVAANSNSNS----------NANAIVEDVASSVSHETNNNNTVSPKKRFRE-EEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDH

Query:  HHQGFFAANLMETNGNGGCGWDTLQW
          Q FF+ NL++TN N G    +LQW
Subjt:  HHQGFFAANLMETNGNGGCGWDTLQW

XP_023546902.1 dehydration-responsive element-binding protein 2D-like [Cucurbita pepo subsp. pepo]2.6e-6466.67Show/hide
Query:  MLKSSSNNNKRPS-----SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSA
        MLKSS    + PS     SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAA+AYDNAARRLYGS+AKLNLPHLSP   
Subjt:  MLKSSSNNNKRPS-----SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSA

Query:  SSSSSDNVAAN-SNSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHHQGFFAANLM
          +    +  + S+S+ +A A VEDV S  S   +N+   S + RF EEEEE+IGGLWR+MSISLDDSIW EAAMSLDFP+V    +D   QG FAA+ +
Subjt:  SSSSSDNVAAN-SNSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHHQGFFAANLM

Query:  ETNGNGGCGWDTLQWC
        ++N     GWDTLQWC
Subjt:  ETNGNGGCGWDTLQWC

XP_038884866.1 dehydration-responsive element-binding protein 2D-like [Benincasa hispida]2.5e-8382.16Show/hide
Query:  MLK-SSSNNNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSAS-SS
        MLK SSSNNNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNL    PVSAS SS
Subjt:  MLK-SSSNNNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSAS-SS

Query:  SSDNVAANSNSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHHQGFFAANLMETNG
        SSD+VAA  N+N N NA+VEDVASS     N++NTV PKKRFREEEEEQIGGLWRAMSIS+DDS+WVEAAMSLDFP+VM+       QG F+ANLM+TNG
Subjt:  SSDNVAANSNSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHHQGFFAANLMETNG

Query:  NGGCGWDTLQWCL
        NG  GWD+LQWCL
Subjt:  NGGCGWDTLQWCL

TrEMBL top hitse value%identityAlignment
A0A0A0LL46 AP2/ERF domain-containing protein5.0e-6667.7Show/hide
Query:  MLKSSSN---NNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLS---PVS
        MLKS S+   NNK+ SSRKGCMRGKGGPENA CTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLP +S    VS
Subjt:  MLKSSSN---NNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLS---PVS

Query:  ASSSSSDNVAANSNSNS----------NANAIVEDVASSVSHETNNNNTVSPKKRFRE-EEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDH
         SSSSS   + N+N+NS          + N  VEDVASS        +++S  KRFRE E++EQIGGLWRAMSISLDDSIWVEAAMSLDFP++ME     
Subjt:  ASSSSSDNVAANSNSNS----------NANAIVEDVASSVSHETNNNNTVSPKKRFRE-EEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDH

Query:  HHQGFFAANLMETNGNGGCGWDTLQW
          Q FF+ NL++TN N G    +LQW
Subjt:  HHQGFFAANLMETNGNGGCGWDTLQW

A0A1S3BAM0 dehydration-responsive element-binding protein 2D3.9e-6669.23Show/hide
Query:  MLKSSSN---NNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLP------HLS
        MLKS S+   NNK+ SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS+DAALAYDNAARRLYGSDAKLNLP       +S
Subjt:  MLKSSSN---NNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLP------HLS

Query:  PVSASSSSSDN------VAANSNSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHH
          S+SS++SDN      VA  S  N+  N +VEDVASS S  +NN       KRFRE+EEEQIGGLWRAMSISLDDSIWVEAAMSLDFP++ME       
Subjt:  PVSASSSSSDN------VAANSNSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHH

Query:  QGFFAANLMETNGNGGCGWDT
        Q  F+ NL++TN N   GWD+
Subjt:  QGFFAANLMETNGNGGCGWDT

A0A5A7VDQ3 Dehydration-responsive element-binding protein 2D3.9e-6669.23Show/hide
Query:  MLKSSSN---NNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLP------HLS
        MLKS S+   NNK+ SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS+DAALAYDNAARRLYGSDAKLNLP       +S
Subjt:  MLKSSSN---NNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLP------HLS

Query:  PVSASSSSSDN------VAANSNSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHH
          S+SS++SDN      VA  S  N+  N +VEDVASS S  +NN       KRFRE+EEEQIGGLWRAMSISLDDSIWVEAAMSLDFP++ME       
Subjt:  PVSASSSSSDN------VAANSNSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHH

Query:  QGFFAANLMETNGNGGCGWDT
        Q  F+ NL++TN N   GWD+
Subjt:  QGFFAANLMETNGNGGCGWDT

A0A6J1HEF2 dehydration-responsive element-binding protein 2D-like1.6e-6466.67Show/hide
Query:  MLKSSSNNNKRPS-----SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSP-VS
        MLKSS    + PS     SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAA+AYDNAARRLYGS+AKLNLPHLSP + 
Subjt:  MLKSSSNNNKRPS-----SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSP-VS

Query:  ASSSSSDNVAANSNSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHHQGFFAANLM
          +       + S+S+ +A A VEDV S  S   +N    S + RF EEEEE+IGGLWR+MSISLDDSIW EAAMSLDFP+V    +D   QG FAA+ +
Subjt:  ASSSSSDNVAANSNSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHHQGFFAANLM

Query:  ETNGNGGCGWDTLQWC
        ++N     GWDTLQWC
Subjt:  ETNGNGGCGWDTLQWC

A0A6J1K5U2 dehydration-responsive element-binding protein 2D-like6.2e-6466.97Show/hide
Query:  MLKSSSNNNKRPS-----SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSA
        MLKSS    + PS     SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAA+AYDNAARRLYGSDAKLNLPHLSP   
Subjt:  MLKSSSNNNKRPS-----SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSA

Query:  SSSSSDNVAANSNSNSNANAIVEDVA--SSVSHETNNNNTVSPKKRF-REEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHHQGFFAAN
               V+ +S+S+S A A VEDV   SSV H+       S + RF  EEEEE+IGGLW++MSISLDDSIW EAAMSLDFP++    +D   QG FAA+
Subjt:  SSSSSDNVAANSNSNSNANAIVEDVA--SSVSHETNNNNTVSPKKRF-REEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHHQGFFAAN

Query:  LMETNGNGGCGWDTLQWC
         +++N     GWDTLQWC
Subjt:  LMETNGNGGCGWDTLQWC

SwissProt top hitse value%identityAlignment
P61827 Dehydration-responsive element-binding protein 2G1.0e-3180.26Show/hide
Query:  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPH
        SRKGCM+GKGGPENA+CT++GVRQRTWGKWVAEIREPNRG RLWLGTF+TS +AA+AYD AA++LYG +AKLNL H
Subjt:  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPH

Q10R18 Dehydration-responsive element-binding protein 2E4.7e-2971.43Show/hide
Query:  RKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSASSS
        +KG  RGKGGP+NA+C Y+GVRQRTWGKWVAEIREPN+  RLWLG+F T+ +AALAYD AARRLYG DA LNLPHL   SA+++
Subjt:  RKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSASSS

Q84ZA1 Dehydration-responsive element-binding protein 2C2.8e-2947.71Show/hide
Query:  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNL------PHLSPVSASSSSSDNVAANS
        SRKGCM+GKGGPEN  C ++GVRQRTWGKWVAEIREPNRGARLWLGTF+T+ DAA AYD+AAR LYG  A+LNL          P +A+ S +   + N 
Subjt:  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNL------PHLSPVSASSSSSDNVAANS

Query:  NSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLD
        +SN++++   +   +++    ++N T+ P    +E+ E  +  L +A    L+
Subjt:  NSNSNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLD

Q9LQZ2 Dehydration-responsive element-binding protein 2D2.5e-3855.17Show/hide
Query:  SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSASSSSSDNVAANSNSNSN
        SSRKGCMRGKGGP+NASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS +AALAYD+AAR+LYG +A LNLP        ++SS       +SN+ 
Subjt:  SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSASSSSSDNVAANSNSNSN

Query:  ANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISL----DDSIWVEAAMSLDFPIVMEHEQD
                +SS S    ++N +S   R  EE        W  +++ L    D SIW EA MSL FP V E + D
Subjt:  ANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISL----DDSIWVEAAMSLDFPIVMEHEQD

Q9SIZ0 Putative dehydration-responsive element-binding protein 2H8.1e-2974.03Show/hide
Query:  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHL
        SRKGCM+GKGGPEN  C Y GVRQRTWGKWVAEIREP RGA+LWLGTF +S++AALAYD A++ +YG  A+LNLP L
Subjt:  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHL

Arabidopsis top hitse value%identityAlignment
AT1G75490.1 Integrase-type DNA-binding superfamily protein1.8e-3955.17Show/hide
Query:  SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSASSSSSDNVAANSNSNSN
        SSRKGCMRGKGGP+NASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS +AALAYD+AAR+LYG +A LNLP        ++SS       +SN+ 
Subjt:  SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSASSSSSDNVAANSNSNSN

Query:  ANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISL----DDSIWVEAAMSLDFPIVMEHEQD
                +SS S    ++N +S   R  EE        W  +++ L    D SIW EA MSL FP V E + D
Subjt:  ANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISL----DDSIWVEAAMSLDFPIVMEHEQD

AT2G40340.1 Integrase-type DNA-binding superfamily protein4.9e-2958.25Show/hide
Query:  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSASSSSSDNVAANSNSNSNA
        SRKGCM+GKGGPEN  C Y+GVRQR WGKWVAEIREP+ GARLWLGTF +S++AALAYD AA+ +YG  A+LNLP ++  S+S++++  V+ +  + S+ 
Subjt:  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSASSSSSDNVAANSNSNSNA

Query:  NAI
        + +
Subjt:  NAI

AT2G40350.1 Integrase-type DNA-binding superfamily protein5.8e-3074.03Show/hide
Query:  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHL
        SRKGCM+GKGGPEN  C Y GVRQRTWGKWVAEIREP RGA+LWLGTF +S++AALAYD A++ +YG  A+LNLP L
Subjt:  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHL

AT3G57600.1 Integrase-type DNA-binding superfamily protein3.5e-2766.28Show/hide
Query:  RKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSASSSSS
        +KG  RGKGGP+NA C Y+GVRQRTWGKWVAEIREP + ARLWLG+F T+ +AA+AYD AA +LYG DA LNLPHL   +  S S+
Subjt:  RKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSASSSSS

AT5G18450.1 Integrase-type DNA-binding superfamily protein7.3e-3380.26Show/hide
Query:  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPH
        SRKGCM+GKGGPENA+CT++GVRQRTWGKWVAEIREPNRG RLWLGTF+TS +AA+AYD AA++LYG +AKLNL H
Subjt:  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAATCTTCATCCAACAACAACAAAAGACCCTCTTCAAGAAAGGGTTGTATGAGAGGCAAAGGAGGCCCTGAAAACGCTTCTTGTACTTATAAAGGTGTTCGTCA
AAGAACTTGGGGAAAATGGGTTGCTGAAATTCGAGAGCCAAATCGTGGAGCTCGTCTTTGGCTTGGTACTTTTGATACTTCTCATGATGCTGCTTTAGCCTATGACAATG
CTGCCCGTCGTCTTTATGGCTCTGATGCTAAACTCAATCTCCCTCATCTTTCTCCTGTTTCTGCTTCTTCTTCTTCTTCTGATAACGTTGCTGCTAATTCTAATTCTAAT
TCTAATGCCAATGCCATTGTGGAAGATGTTGCTTCCTCTGTTTCTCATGAAACCAACAATAACAACACTGTATCGCCGAAGAAGAGATTTAGGGAGGAAGAGGAAGAACA
AATTGGGGGGCTTTGGAGAGCTATGAGTATTAGTTTAGATGATTCTATTTGGGTTGAAGCAGCTATGTCTTTGGATTTTCCTATTGTTATGGAACATGAGCAGGATCATC
ATCATCAAGGCTTTTTTGCTGCTAATTTGATGGAAACAAATGGAAATGGTGGATGTGGATGGGATACACTTCAATGGTGTTTATGA
mRNA sequenceShow/hide mRNA sequence
TTTTTGCTCGTGTAGAGACGAAAATGTGGCCATGTGTGTGCAAGACAGAATCCCAGAAGAGCTGCTCAACCTATGGACACGATTTCTTCTGTTCTTCTTGCCAAGTATCA
TCTTTTCTTCTCTTTCAGCCACGTTTCATTCTTCCTTCTAAATTCTTCTTCCATTTTTAAACACCCCATTTCCCACTCCATAATTCCCACTCCCCAAAATCCCTTTTTTC
TTTCTTTCTTTCTTTCTTTCTCTCTTTCTCTTTCTTCCATATGTTGAAATCTTCATCCAACAACAACAAAAGACCCTCTTCAAGAAAGGGTTGTATGAGAGGCAAAGGAG
GCCCTGAAAACGCTTCTTGTACTTATAAAGGTGTTCGTCAAAGAACTTGGGGAAAATGGGTTGCTGAAATTCGAGAGCCAAATCGTGGAGCTCGTCTTTGGCTTGGTACT
TTTGATACTTCTCATGATGCTGCTTTAGCCTATGACAATGCTGCCCGTCGTCTTTATGGCTCTGATGCTAAACTCAATCTCCCTCATCTTTCTCCTGTTTCTGCTTCTTC
TTCTTCTTCTGATAACGTTGCTGCTAATTCTAATTCTAATTCTAATGCCAATGCCATTGTGGAAGATGTTGCTTCCTCTGTTTCTCATGAAACCAACAATAACAACACTG
TATCGCCGAAGAAGAGATTTAGGGAGGAAGAGGAAGAACAAATTGGGGGGCTTTGGAGAGCTATGAGTATTAGTTTAGATGATTCTATTTGGGTTGAAGCAGCTATGTCT
TTGGATTTTCCTATTGTTATGGAACATGAGCAGGATCATCATCATCAAGGCTTTTTTGCTGCTAATTTGATGGAAACAAATGGAAATGGTGGATGTGGATGGGATACACT
TCAATGGTGTTTATGA
Protein sequenceShow/hide protein sequence
MLKSSSNNNKRPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGSDAKLNLPHLSPVSASSSSSDNVAANSNSN
SNANAIVEDVASSVSHETNNNNTVSPKKRFREEEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPIVMEHEQDHHHQGFFAANLMETNGNGGCGWDTLQWCL