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Clc08G15230 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G15230
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionThioredoxin
Genome locationClcChr08:26086138..26087588
RNA-Seq ExpressionClc08G15230
SyntenyClc08G15230
Gene Ontology termsNA
InterPro domainsIPR013766 - Thioredoxin domain
IPR017937 - Thioredoxin, conserved site
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029409.1 Thioredoxin H5, partial [Cucurbita argyrosperma subsp. argyrosperma]8.9e-4476.38Show/hide
Query:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV
        MA EGQVI V KV+EF+ALVK+G +AGKL       IVVDFTASWCPPCRFIAPVFAE+AKAH +V+FLKVDVD+LKEIA+KF+V AMPTF F+KGG EV
Subjt:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV

Query:  HRIVGADKVELGKKVLELSASAAATSA
        HRIVGADKVELGKKVLEL A AA +SA
Subjt:  HRIVGADKVELGKKVLELSASAAATSA

XP_022962605.1 thioredoxin H5-like [Cucurbita moschata]4.0e-4477.17Show/hide
Query:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV
        MA EGQVI V KVEEF+ALVK+G +AGKL       IVVDFTASWCPPCRFIAPVFAE+AKAH +V+FLKVDVD+LKEIA+KF+V AMPTF F+KGG EV
Subjt:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV

Query:  HRIVGADKVELGKKVLELSASAAATSA
        HRIVGADKVELGKKVLEL A AA +SA
Subjt:  HRIVGADKVELGKKVLELSASAAATSA

XP_022997319.1 thioredoxin H5-like [Cucurbita maxima]3.4e-4374.8Show/hide
Query:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV
        MA EGQ I V KV+EF+ALVK+G++AGKL       IVVDFTASWCPPCRFIAPVFAE+AKAH++V+FLKVDVD+LKEIA+KF+V AMPTF F+KGG EV
Subjt:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV

Query:  HRIVGADKVELGKKVLELSASAAATSA
        +RIVGADKVELGKKVLEL A AA +SA
Subjt:  HRIVGADKVELGKKVLELSASAAATSA

XP_023545550.1 thioredoxin H5-like [Cucurbita pepo subsp. pepo]6.1e-4578.74Show/hide
Query:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV
        MA EGQVI V KVEEF+ALVK+G +AGKL       IVVDFTASWCPPCRFIAPVFAE+AKAH +V+FLKVDVDELKEIA+KFDV AMPTF F+KGG EV
Subjt:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV

Query:  HRIVGADKVELGKKVLELSASAAATSA
        HRIVGADKVELGKKVLEL A AA +SA
Subjt:  HRIVGADKVELGKKVLELSASAAATSA

XP_038884374.1 thioredoxin H-type-like [Benincasa hispida]9.8e-4373.44Show/hide
Query:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV
        MAEEGQVIG+HKVEEF+ LVK GN+AGKL       IVVDFTASWCPPCRFIAP+FAELAKA+ +VIFLKVDVDE+KEIAEK+ VNAMPTF F+K   E+
Subjt:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV

Query:  HRIVGADKVELGKKVLELSASAAATSAA
        HRIVGADKV+LG KV EL+ SAAA++ +
Subjt:  HRIVGADKVELGKKVLELSASAAATSAA

TrEMBL top hitse value%identityAlignment
A0A6J1CST8 thioredoxin H-type 1-like9.0e-4273.85Show/hide
Query:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV
        MAEEGQVIGVH VE F+ L+K+G ++GKL       IVVDFTASWCPPCRFIAP+FAELAKAH  VIFLKVDVDE+KE++EKF+V AMPTF F+K G EV
Subjt:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV

Query:  --HRIVGADKVELGKKVLELSASAAATSAA
           RIVGADKVELGK+VL LSA AAATSAA
Subjt:  --HRIVGADKVELGKKVLELSASAAATSAA

A0A6J1GID1 thioredoxin H1-like4.6e-3869.53Show/hide
Query:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV
        MA EGQVI +   +EF+ ++ +  ++GKL       IV+DFTASWCPPCR IAPVFAELAKAH +V FLKVDVD +KEIAE+F+VNAMPTF F+KGG EV
Subjt:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV

Query:  HRIVGADKVELGKKVLELSASAAATSAA
        HRIVGADKVELG KVLELSA A ATSAA
Subjt:  HRIVGADKVELGKKVLELSASAAATSAA

A0A6J1HFK3 thioredoxin H5-like1.9e-4477.17Show/hide
Query:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV
        MA EGQVI V KVEEF+ALVK+G +AGKL       IVVDFTASWCPPCRFIAPVFAE+AKAH +V+FLKVDVD+LKEIA+KF+V AMPTF F+KGG EV
Subjt:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV

Query:  HRIVGADKVELGKKVLELSASAAATSA
        HRIVGADKVELGKKVLEL A AA +SA
Subjt:  HRIVGADKVELGKKVLELSASAAATSA

A0A6J1KB35 thioredoxin H5-like1.6e-4374.8Show/hide
Query:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV
        MA EGQ I V KV+EF+ALVK+G++AGKL       IVVDFTASWCPPCRFIAPVFAE+AKAH++V+FLKVDVD+LKEIA+KF+V AMPTF F+KGG EV
Subjt:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV

Query:  HRIVGADKVELGKKVLELSASAAATSA
        +RIVGADKVELGKKVLEL A AA +SA
Subjt:  HRIVGADKVELGKKVLELSASAAATSA

Q8H9E2 Thioredoxin h3.5e-3866.93Show/hide
Query:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV
        MA EGQVI +   EEF+A++ +  ++G+L       IV+DFTASWCPPCRFIAPVFAELAKAH HV FLKVDVD +KEIA++F+V AMPTF F+KGG EV
Subjt:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV

Query:  HRIVGADKVELGKKVLELSASAAATSA
        HRIVGADKVELG KVLELSA+ A  ++
Subjt:  HRIVGADKVELGKKVLELSASAAATSA

SwissProt top hitse value%identityAlignment
A2YIW7 Thioredoxin H-type1.7e-2952.76Show/hide
Query:  AEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEVH
        AEEG VI  H  +EF+A + +  +AGK       ++++DFTASWC PCRFIAPVFAE AK     +FLKVDVDELKE+AEK++V AMPTF F+K G E  
Subjt:  AEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEVH

Query:  RIVGADKVELGKKVLE-LSASAAATSA
        ++VGA K +L   +++ + A+AA+ SA
Subjt:  RIVGADKVELGKKVLE-LSASAAATSA

P29449 Thioredoxin H-type 12.6e-3054.4Show/hide
Query:  AEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEVH
        +EEGQV G HKVEE+    K+G +  KL       +VVDFTASWC PCRFIAP+ A++AK   HVIFLKVDVDELK ++ ++ V AMPTF F+K G EV 
Subjt:  AEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEVH

Query:  RIVGADKVELGKKVLELSASAAATS
        R+VGA K EL + +++ +A A  T+
Subjt:  RIVGADKVELGKKVLELSASAAATS

P68177 Thioredoxin H-type 17.1e-2852.5Show/hide
Query:  GQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEVHRIV
        G+VI  H VE++       N+  K  K  N +IV+DFTA WCPPCRFIAP+F ELAK H  V+F KVDVDEL  +A++FDV AMPTF ++KG  ++ ++V
Subjt:  GQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEVHRIV

Query:  GADKVELGKKVLELSASAAA
        GA K E+  K+L+ S  AAA
Subjt:  GADKVELGKKVLELSASAAA

Q0D840 Thioredoxin H11.7e-2952.76Show/hide
Query:  AEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEVH
        AEEG VI  H  +EF+A + +  +AGK       ++++DFTASWC PCRFIAPVFAE AK     +FLKVDVDELKE+AEK++V AMPTF F+K G E  
Subjt:  AEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEVH

Query:  RIVGADKVELGKKVLE-LSASAAATSA
        ++VGA K +L   +++ + A+AA+ SA
Subjt:  RIVGADKVELGKKVLE-LSASAAATSA

Q39241 Thioredoxin H53.2e-2852.99Show/hide
Query:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV
        MA EG+VI  H +E +   VK  N++ KL       IV+DFTASWCPPCRFIAPVFAE+AK   +V+F K+DVDEL+ +A++F V AMPTF F+K G  +
Subjt:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV

Query:  HRIVGADKVELGKKVLE
         R+VGA K E+ +K+++
Subjt:  HRIVGADKVELGKKVLE

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein8.9e-2649.57Show/hide
Query:  AEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAH-AHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV
        AEEGQVIG H  + +   + +  ++ KL       IV+DFTASWCPPCR IAP+F +LAK   +  IF KVDVDEL+ +A++F V AMPTF F+K G  V
Subjt:  AEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAH-AHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV

Query:  HRIVGADKVELGKKVLE
         ++VGA+K +L  K+++
Subjt:  HRIVGADKVELGKKVLE

AT1G45145.1 thioredoxin H-type 52.3e-2952.99Show/hide
Query:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV
        MA EG+VI  H +E +   VK  N++ KL       IV+DFTASWCPPCRFIAPVFAE+AK   +V+F K+DVDEL+ +A++F V AMPTF F+K G  +
Subjt:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV

Query:  HRIVGADKVELGKKVLE
         R+VGA K E+ +K+++
Subjt:  HRIVGADKVELGKKVLE

AT3G17880.1 tetraticopeptide domain-containing thioredoxin1.9e-2338.98Show/hide
Query:  EGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEVHRI
        +G+VI +H   E EA  K    A +L       +++ FTA+WC PCR+++P+++ LA  H+ V+FLKVD+D+  ++A  ++++++PTF F++ G EV ++
Subjt:  EGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEVHRI

Query:  VGADKVELGKKVLELSAS
        VGADK  L +K+ + S+S
Subjt:  VGADKVELGKKVLELSAS

AT3G51030.1 thioredoxin H-type 13.4e-2550.91Show/hide
Query:  AEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEVH
        +EEGQVI  H VE +   +++ N++        +++VVDFTASWC PCRFIAP FA+LAK   +V+FLKVD DELK +A  + + AMPTF F+K G  + 
Subjt:  AEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEVH

Query:  RIVGADKVEL
        ++VGA K EL
Subjt:  RIVGADKVEL

AT5G42980.1 thioredoxin 31.9e-2855.86Show/hide
Query:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV
        MA EG+VI  H VE++   +K  N++ KL       IV+DFTA+WCPPCRFIAPVFA+LAK H  V+F KVDVDEL  +AE+F V AMPTF F+K G   
Subjt:  MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEV

Query:  HRIVGADKVEL
          +VGA K E+
Subjt:  HRIVGADKVEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAGAAGGGCAAGTGATTGGAGTTCACAAGGTTGAGGAATTTGAGGCGCTTGTCAAGCGAGGAAACGACGCGGGTAAACTGAACAAGTCGTTGAACTCGATGAT
TGTGGTGGATTTTACTGCTTCCTGGTGTCCGCCATGCCGTTTCATTGCTCCAGTATTCGCAGAGTTGGCTAAGGCGCACGCCCATGTCATTTTCCTGAAAGTAGACGTCG
ATGAACTTAAAGAAATTGCCGAGAAGTTCGATGTTAATGCAATGCCGACCTTTGCTTTCGTGAAAGGAGGGGTGGAAGTTCACAGGATTGTCGGTGCTGACAAAGTGGAG
CTGGGGAAGAAAGTATTGGAATTGAGCGCTTCAGCGGCTGCAACTTCTGCTGCATAG
mRNA sequenceShow/hide mRNA sequence
TTATATAAACCCTCCTCCCCTTTGGTTTCTGTTCATCGCTTCATTTTCAAATACAGCGTAGACTTTTTGTTGAAGAACACCGATTTTTGTTTGAACCAACAATGGCTGAA
GAAGGGCAAGTGATTGGAGTTCACAAGGTTGAGGAATTTGAGGCGCTTGTCAAGCGAGGAAACGACGCGGGTAAACTGAACAAGTCGTTGAACTCGATGATTGTGGTGGA
TTTTACTGCTTCCTGGTGTCCGCCATGCCGTTTCATTGCTCCAGTATTCGCAGAGTTGGCTAAGGCGCACGCCCATGTCATTTTCCTGAAAGTAGACGTCGATGAACTTA
AAGAAATTGCCGAGAAGTTCGATGTTAATGCAATGCCGACCTTTGCTTTCGTGAAAGGAGGGGTGGAAGTTCACAGGATTGTCGGTGCTGACAAAGTGGAGCTGGGGAAG
AAAGTATTGGAATTGAGCGCTTCAGCGGCTGCAACTTCTGCTGCATAGATGGTCAGCTTGGAAGAACGTTCTCCCTCTTATTATTATGGTGTATTGATGATTCTGGTTTC
GAGTTTGTTCTACTTGTGGATTTCATGACATTATGTCTGAGATGTTTACTTGCTTAATGAATGTTTGTAGAATAATAAATGTATAATAAGATTTAACATATATGATAAAT
TAGCTGCTTGAGCTTTTAAATTCATTGGTGGCTTGAAAGTTTATAGATGGCTTCATTTGTGTGGACAGAAGAAAGAAAAAGAACATCTAAAAAAGCAGAGTCTACTTTTG
CTTTACTTTCTCTCTTTTTTCCCTGAGTTGGGAAAATCTTTAATGGTGAGAAGGGTCTAAGACTTTTATGGTTGGTTG
Protein sequenceShow/hide protein sequence
MAEEGQVIGVHKVEEFEALVKRGNDAGKLNKSLNSMIVVDFTASWCPPCRFIAPVFAELAKAHAHVIFLKVDVDELKEIAEKFDVNAMPTFAFVKGGVEVHRIVGADKVE
LGKKVLELSASAAATSAA