CuGenDBv2

Gene ID	Clc08G15450
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	CBS domain-containing protein CBSX3, mitochondrial-like
Genome location	ClcChr08:26276225..26277456
RNA-Seq Expression	Clc08G15450
Synteny	Clc08G15450
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR000644 - CBS domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0065222.1 CBS domain-containing protein CBSX3 [Cucumis melo var. makuwa]

7.3e-78

74.89

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Query:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG
        ++A+RSWQETLKKITV Q+S RRE +K+E ILE SELGG   S  K LENITV EIVS++G G I SS +SC+AEDTAI+AVQNMAR+N+GSLVV+KSEG
Subjt:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG

Query:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV
        E IAGIVTERADYLKKIIADGRSPIYT+VGEIMT EDKLVT+TSDT ILKAMQLMT                    ENRIR+VPVIDGKLVGMISIVDVV
Subjt:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV

Query:  RAVVEQQNGELERLNDYIKGEYY
        RAVVEQQNGELERLNDYIKGEYY
Subjt:  RAVVEQQNGELERLNDYIKGEYY

KAG6585586.1 CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-77

75.34

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Query:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG
        ++AVRSWQETL KI ++QHS RRETN++EK+ E S LG   SS LKGLENI V EIVS KGDGSI S WLSC+A DTAIDAVQNMARNN+GSLVVLK EG
Subjt:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG

Query:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV
        +HIAGIVTER DYLKKIIADGRSPIYT+VGEIMT EDKLV+VTSDT ILKAMQLMT                    ENRIR+VPVIDGKLVGMISIVDVV
Subjt:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV

Query:  RAVVEQQNGELERLNDYIKGEYY
        RAVVEQQNGEL+RLN+YIKGEYY
Subjt:  RAVVEQQNGELERLNDYIKGEYY

XP_023538057.1 CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita pepo subsp. pepo]

4.3e-78

75.34

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Query:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG
        ++AVRSWQETL KI ++QHS RRETN++EK+ E S+LG   SS LKGLENI+V EIVS KGDGSI S WLSC+A DTAIDAVQNMARNN+GSLVVLK EG
Subjt:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG

Query:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV
        +HIAGIVTER DYLKKIIADGRSPIYT+VGEIMT EDKLV+VTSDT ILKAMQLMT                    ENRIR+VPVIDGKLVGMISIVDVV
Subjt:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV

Query:  RAVVEQQNGELERLNDYIKGEYY
        RAVVEQQNGEL+RLN+YIKGEYY
Subjt:  RAVVEQQNGELERLNDYIKGEYY

XP_031736873.1 CBS domain-containing protein CBSX3, mitochondrial [Cucumis sativus]

5.1e-79

74.44

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Query:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG
        M+AVRSWQETLKKITV QHSYRRE +K++ ILE  EL G  SS LK LENITV EIVS+KG+G I SSW+SC+AEDTAIDAVQNMAR+N+GSLVV+KSEG
Subjt:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG

Query:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV
        E+IAGIVTER DYLKKIIADGRSPIYT+VGEIMT EDKLVT+TSDT ILKAMQLMT                    EN IR++PVIDGKLVGMISIVDV 
Subjt:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV

Query:  RAVVEQQNGELERLNDYIKGEYY
        RAVV+QQNGELE+LN+YIKGEYY
Subjt:  RAVVEQQNGELERLNDYIKGEYY

XP_038884780.1 CBS domain-containing protein CBSX3, mitochondrial [Benincasa hispida]

2.4e-89

82.06

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Query:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG
        MKAVRSWQETLKKIT+TQHSYRRETNK+EKILE SELGGD SSPLKGL+NITV EIVSR+GDGSI SSWL+CKAEDTAIDAVQNMARNN+GSLVVLKSEG
Subjt:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG

Query:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV
        EHIAGIVTE+ DYLKKIIADGRSPIYT+VGEIMT EDKLVTVTSDT ILKA+QLMT                    ENRIR+VPVIDGKLVGMISIVDVV
Subjt:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV

Query:  RAVVEQQNGELERLNDYIKGEYY
        RA+VEQQNGEL+RLN+YIKGEYY
Subjt:  RAVVEQQNGELERLNDYIKGEYY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNN1 Uncharacterized protein

2.5e-79

74.44

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Query:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG
        M+AVRSWQETLKKITV QHSYRRE +K++ ILE  EL G  SS LK LENITV EIVS+KG+G I SSW+SC+AEDTAIDAVQNMAR+N+GSLVV+KSEG
Subjt:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG

Query:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV
        E+IAGIVTER DYLKKIIADGRSPIYT+VGEIMT EDKLVT+TSDT ILKAMQLMT                    EN IR++PVIDGKLVGMISIVDV 
Subjt:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV

Query:  RAVVEQQNGELERLNDYIKGEYY
        RAVV+QQNGELE+LN+YIKGEYY
Subjt:  RAVVEQQNGELERLNDYIKGEYY

A0A1S4DVM5 CBS domain-containing protein CBSX3, mitochondrial

2.5e-76

74.44

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Query:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG
        ++A+RSWQETLKKITV Q+S RRE +K+E ILE SELGG   S  K LENITV EIVS++G G I SS +SC+AEDTAI+AVQNMAR+N+GSLVV+KSEG
Subjt:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG

Query:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV
        E IAGIVTER DYLKKIIADGRSPIYT+VGEIMT EDKLVT+TSDT ILKAMQLMT                    ENRIR+VPVIDGKLVGMISIVDVV
Subjt:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV

Query:  RAVVEQQNGELERLNDYIKGEYY
        RAVVEQQNGELERLNDYIKGEYY
Subjt:  RAVVEQQNGELERLNDYIKGEYY

A0A5A7VA77 CBS domain-containing protein CBSX3

3.6e-78

74.89

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Query:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG
        ++A+RSWQETLKKITV Q+S RRE +K+E ILE SELGG   S  K LENITV EIVS++G G I SS +SC+AEDTAI+AVQNMAR+N+GSLVV+KSEG
Subjt:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG

Query:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV
        E IAGIVTERADYLKKIIADGRSPIYT+VGEIMT EDKLVT+TSDT ILKAMQLMT                    ENRIR+VPVIDGKLVGMISIVDVV
Subjt:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV

Query:  RAVVEQQNGELERLNDYIKGEYY
        RAVVEQQNGELERLNDYIKGEYY
Subjt:  RAVVEQQNGELERLNDYIKGEYY

A0A6J1GJI0 CBS domain-containing protein CBSX3, mitochondrial-like

6.7e-77

74.44

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Query:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG
        ++AVRSWQETL KI ++QHS RRETN++EK+ + S LG   SS LKGLENI+V EIVS KGDGSI S WLSC+A+DTAI AVQNMARNN+GSLVVLK EG
Subjt:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG

Query:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV
        +HIAGIVTER DYLKKIIADGRSPIYT+VGEIMT EDKLV+VTSDT ILKAMQLMT                    ENRIR+VPVIDGKLVGMISIVDVV
Subjt:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV

Query:  RAVVEQQNGELERLNDYIKGEYY
        RAVVEQQNGEL+RLN+YIKGEYY
Subjt:  RAVVEQQNGELERLNDYIKGEYY

A0A6J1KTQ7 CBS domain-containing protein CBSX3, mitochondrial-like

7.9e-78

73.99

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Query:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG
        ++AVRSWQETL KI ++QHS RRETN++EK+ + S++G   SS LKGLENI+V EI+S KGDGSI S WLSC+A+DTAIDAVQNMARNN+GSLVVLK EG
Subjt:  MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEG

Query:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV
        +HIAGIVTER DYLKKIIADGRSPIYT+VGEIMT EDKLV+VTSDT ILKAMQLMT                    ENRIR+VPVIDGKLVGMISIVDVV
Subjt:  EHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVV

Query:  RAVVEQQNGELERLNDYIKGEYY
        RAVVEQQNGEL+RLN+YIKGEYY
Subjt:  RAVVEQQNGELERLNDYIKGEYY

SwissProt top hits

e value

%identity

Alignment

P32987 Uncharacterized 17.7 kDa protein in bps2 3'region

1.0e-05

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Query:  KAEDTAIDAVQNMARNNMGSLVVLKSEGEHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNI
        K   T  +A + M  +N+GSLVV+ S+   + GI+TER D +K   A     I + V + MT + K   VT DT++  A+ +M                 
Subjt:  KAEDTAIDAVQNMARNNMGSLVVLKSEGEHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNI

Query:  LAFAENRIRNVPVI--DGKLVGMISIVDVVRAVVEQQNGELERLNDYIKG
             N  R++P+I  +GKL G++SI D+ RA+++    +  +  + +KG
Subjt:  LAFAENRIRNVPVI--DGKLVGMISIVDVVRAVVEQQNGELERLNDYIKG

Q9LEV3 CBS domain-containing protein CBSX3, mitochondrial

6.1e-35

48.88

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Query:  GLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLK-SEGEHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSD
        G E+ T+ +++  KG  S   SWL C  +DT  DAV++M ++N+G+LVV+K  E + +AGI+TER DYL+KII  GRS   T+VG+IMT E+KL+TVT +
Subjt:  GLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLK-SEGEHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSD

Query:  TKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGK-LVGMISIVDVVRAVVEQQNGELERLNDYIKGEY
        TK+L+AMQLMT                    +NRIR++PVI  K ++GM+SI DVVRAVV +   EL+RLN YI+G Y
Subjt:  TKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGK-LVGMISIVDVVRAVVEQQNGELERLNDYIKGEY

Arabidopsis top hits

e value

%identity

Alignment

AT1G47271.1 Cystathionine beta-synthase (CBS) family protein

6.1e-46

52.45

Show/hide

Query:  NKLEKILERSELGG-----DLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLK-SEGEHIAGIVTERADYLKKIIA
        N++ KI +R    G         P KGLEN+TV +++S K D  I  +W+SC+  DT  DAV+NMA++N+GSLVVL+  + ++IAGIVTER DY+KKII 
Subjt:  NKLEKILERSELGG-----DLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLK-SEGEHIAGIVTERADYLKKIIA

Query:  DGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVVRAVVEQQNGELERLNDYIK
         GRS   T+VGE+MT E KLVTV+S T I+KAMQLM                    +EN IR+VPVIDGK+VG+IS+VDVV+A+V+ QNGEL+RLN++IK
Subjt:  DGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVVRAVVEQQNGELERLNDYIK

Query:  GEYY
        G+YY
Subjt:  GEYY

AT5G10860.1 Cystathionine beta-synthase (CBS) family protein

4.3e-36

48.88

Show/hide

Query:  GLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLK-SEGEHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSD
        G E+ T+ +++  KG  S   SWL C  +DT  DAV++M ++N+G+LVV+K  E + +AGI+TER DYL+KII  GRS   T+VG+IMT E+KL+TVT +
Subjt:  GLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLK-SEGEHIAGIVTERADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSD

Query:  TKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGK-LVGMISIVDVVRAVVEQQNGELERLNDYIKGEY
        TK+L+AMQLMT                    +NRIR++PVI  K ++GM+SI DVVRAVV +   EL+RLN YI+G Y
Subjt:  TKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGK-LVGMISIVDVVRAVVEQQNGELERLNDYIKGEY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAAGCAGTACGATCGTGGCAAGAGACGTTAAAGAAGATAACGGTGACACAACACTCGTATAGAAGAGAAACAAATAAACTGGAAAAGATTTTGGAAAGATCGGAATT
AGGAGGTGATCTGTCTTCTCCGCTGAAAGGTTTGGAGAATATTACTGTAGGGGAGATTGTTTCGAGAAAGGGAGATGGAAGCATTGCCTCCTCTTGGTTATCCTGTAAGG
CAGAGGATACCGCCATTGATGCCGTGCAAAATATGGCTAGAAATAACATGGGATCTTTGGTGGTGTTGAAGTCGGAAGGAGAACACATTGCTGGAATTGTCACAGAACGA
GCAGACTACCTGAAGAAAATAATAGCAGATGGGAGATCTCCCATATACACAAGAGTTGGAGAAATAATGACTTGTGAGGACAAACTAGTAACCGTAACGTCCGACACAAA
GATCCTTAAAGCAATGCAGCTTATGACAGCTGCATCAACACGATCATCGAAGAGGAGAATAATCCAGTTCAATATTTTGGCATTTGCAGAGAATCGCATAAGAAATGTTC
CTGTGATAGATGGCAAACTAGTTGGCATGATTTCTATAGTAGATGTTGTCAGAGCAGTTGTAGAGCAGCAAAATGGGGAACTCGAGCGACTAAACGACTACATAAAAGGA
GAATATTATTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MKAVRSWQETLKKITVTQHSYRRETNKLEKILERSELGGDLSSPLKGLENITVGEIVSRKGDGSIASSWLSCKAEDTAIDAVQNMARNNMGSLVVLKSEGEHIAGIVTER
ADYLKKIIADGRSPIYTRVGEIMTCEDKLVTVTSDTKILKAMQLMTAASTRSSKRRIIQFNILAFAENRIRNVPVIDGKLVGMISIVDVVRAVVEQQNGELERLNDYIKG
EYY

Clc08G15450 (gene) of Watermelon (cordophanus) v2 genome