; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G15530 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G15530
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:26324777..26325853
RNA-Seq ExpressionClc08G15530
SyntenyClc08G15530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023545904.1 uncharacterized protein LOC111805196 [Cucurbita pepo subsp. pepo]6.9e-0644.44Show/hide
Query:  LNSHLVFTIYR---EVTHLP----------LSGFTFGNLVYRILKWFDGHLLASVLLKKLLIRSQFYINNYKEVRNDRSTQKQRNRKGQT
        L+S  VFT+YR    ++HL           LSG T GNLVYRILKWFDGHLLA +L+KKL        N Y+EV   + T+ +   K  +
Subjt:  LNSHLVFTIYR---EVTHLP----------LSGFTFGNLVYRILKWFDGHLLASVLLKKLLIRSQFYINNYKEVRNDRSTQKQRNRKGQT
XP_038884879.1 uncharacterized protein LOC120075501 [Benincasa hispida]5.2e-0656.45Show/hide
Query:  RILKWFDGHLLASVLLKKLLIRSQFYINNYKEVRNDRSTQKQRNRKGQTERESRETLTPSYI
        RILKWFDGHLLAS+LLKK LIRSQFYINNY+EV      Q+  + +GQ    +  + + S+I
Subjt:  RILKWFDGHLLASVLLKKLLIRSQFYINNYKEVRNDRSTQKQRNRKGQTERESRETLTPSYI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATCCTCGTCTCTTCTTCTATCTCCACCTTCTGGTTCAATCTTACTGTGCCTTTCAATGCCTTCTTCCTCCAATCTCTCATTGTTATCGTGTCCACTACTCGTTC
AACGTTGTTCATTCGATTTGATTTCAGGCATACATACTTGAATTCTCATCTTGTTTTCACCATCTACAGAGAAGTTACTCATCTTCCGTTATCTGGATTTACATTCGGCA
ATCTCGTCTACAGAATTTTGAAGTGGTTTGACGGTCATCTTCTTGCATCGGTTTTACTAAAGAAGTTACTCATTCGGTCTCAATTTTACATTAACAATTATAAAGAAGTG
CGTAATGATAGAAGTACACAAAAGCAGAGAAATCGGAAGGGACAAACAGAGCGGGAAAGTAGAGAAACACTGACACCAAGCTATATTCTTGAAATTATCGAGAACAACGC
TTCTACAGCTCTTATTATATCGTTGGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAATCCTCGTCTCTTCTTCTATCTCCACCTTCTGGTTCAATCTTACTGTGCCTTTCAATGCCTTCTTCCTCCAATCTCTCATTGTTATCGTGTCCACTACTCGTTC
AACGTTGTTCATTCGATTTGATTTCAGGCATACATACTTGAATTCTCATCTTGTTTTCACCATCTACAGAGAAGTTACTCATCTTCCGTTATCTGGATTTACATTCGGCA
ATCTCGTCTACAGAATTTTGAAGTGGTTTGACGGTCATCTTCTTGCATCGGTTTTACTAAAGAAGTTACTCATTCGGTCTCAATTTTACATTAACAATTATAAAGAAGTG
CGTAATGATAGAAGTACACAAAAGCAGAGAAATCGGAAGGGACAAACAGAGCGGGAAAGTAGAGAAACACTGACACCAAGCTATATTCTTGAAATTATCGAGAACAACGC
TTCTACAGCTCTTATTATATCGTTGGTATAA
Protein sequenceShow/hide protein sequence
MPILVSSSISTFWFNLTVPFNAFFLQSLIVIVSTTRSTLFIRFDFRHTYLNSHLVFTIYREVTHLPLSGFTFGNLVYRILKWFDGHLLASVLLKKLLIRSQFYINNYKEV
RNDRSTQKQRNRKGQTERESRETLTPSYILEIIENNASTALIISLV