; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G16163 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G16163
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description60S ribosomal protein L16, putative
Genome locationClcChr08:26746510..26748386
RNA-Seq ExpressionClc08G16163
SyntenyClc08G16163
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000114 - Ribosomal protein L16
IPR016180 - Ribosomal protein L10e/L16
IPR020798 - Ribosomal protein L16, conserved site
IPR036419 - Ribosomal protein S3, C-terminal domain superfamily
IPR036920 - Ribosomal protein L10e/L16 superfamily
IPR044954 - Ribosomal protein S3, mitochondrial, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF27073.1 60S ribosomal protein L16, putative [Ricinus communis]6.3e-15577.61Show/hide
Query:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC
        M G N QGRSLDKR+        +SSTSEK CL+EAKKRLTHFIRQANDLRFAGTTKTTISLF FFGATFFF RDG   +   FF+D REQLLGQ RIKC
Subjt:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC

Query:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF
        WNLMGKDKV+ELIEKFI+LGGIGELIKGIEMMIEIILRNRRIPYGYN YLNE+KKMRS LSNRT TN LIES+K+KSVY+SASPIAQDISF+LRNKTRSF
Subjt:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF

Query:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSY
        RSIFSKI KDIPLVMKKGVE IRICCSG+ EGAEIART+C KYGKTSRN          A+V             CK + TQLGFGRYGTKSC+AG LSY
Subjt:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSY

Query:  RAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST
        RAIEAA RAII         QF+RNG IWVRVLA+LPITGKPTEVRMGRGKGNPTGWIA VSTGQIPFEMDGVSLSNARQAATL AHKPCSST
Subjt:  RAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST

KAB8477473.1 hypothetical protein FH972_025339 [Carpinus fangiana]2.3e-15779.13Show/hide
Query:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC
        M G N QGRSLDKR+        +SSTSEKKCL EAKKRLTHFIRQANDLRFAGTTKTTISLF FFGATFFF RDG   +   FF+D REQLLGQ RIKC
Subjt:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC

Query:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF
        WNLMGKD+VIELIEKFIDLGGIGELIKGIEMMIEIILRNR IPYGYN YLNEVKKMRS LSNRTKTN LIESVKIKSVY+SASPIAQDISF+LRNKTRSF
Subjt:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF

Query:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSY
        RSIFSKI KDIPLVMKKGVE IRICCSG+SEGAEIART+C KYGKTSRN          A+V             CKP+ TQLGFGRYG KSCRAG LSY
Subjt:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSY

Query:  RAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST
        RAIEAA RAII         QF+RNG IWVRVLA+LPITGKPTEVRMGRGKGNPTGWIA VS GQIPFEMDGVSLSNARQAATL AHKPCSST
Subjt:  RAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST

KAF3452254.1 hypothetical protein FNV43_RR08352 [Rhamnella rubrinervis]1.7e-15575.43Show/hide
Query:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC
        M G N +GRSLDKR+        +SSTSEKKCL EAKKRLTHFIR+AN LRFAGTTKTTISLF FFGATFFF RDG   ++  FF+D REQLLGQ RIKC
Subjt:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC

Query:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF
        WNLMGKDKV+ELIEKFIDLGGIGEL+KGIEMMIEIILRNRRIPYGYN YLNEVKKMRS LSNRT TN LIESVKIKSVY+SASPIAQDISF+LRNKTRSF
Subjt:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF

Query:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSY
        RSIFSKI KDIPL+MKKGVE IRICCSG+ EGAEIART+C KYGKTSRN          A+V             CKP+ TQLGFGRYGT+SCRAG LSY
Subjt:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSY

Query:  RAIEAA--------HRAIIEQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSSTNGDKPSQ
        RAIEAA        HRA+  QF+RNG IWVRVLA+LPITGKPTEVRMGRGKGNPTGWIA VSTGQIPFEMDGVSLSNARQAATL AHKPC +  G   + 
Subjt:  RAIEAA--------HRAIIEQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSSTNGDKPSQ

Query:  DSN
        D++
Subjt:  DSN

XP_030965048.1 uncharacterized protein LOC115986320 [Quercus lobata]3.3e-15678.77Show/hide
Query:  GENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKCWN
        G N QGRSLDKR+        +SSTSEKKCL EAKKRLTHFIRQANDLRFAGTTKTTISLF FFGATF F RDG   ++  FF+D REQLLGQ RIKCWN
Subjt:  GENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKCWN

Query:  LMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSFRS
        LMGKD+V+ELIEKFIDLGGIGE IKGIEMMIEIILRNRRIPYGYN YLNEVKKMRS LSNRTKTN LIESVKIKSVY+SAS IAQDISF+LRNKTRSFRS
Subjt:  LMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSFRS

Query:  IFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSYRA
        IFSKI KDIPLVMKKGVE IRICCSG+SEGAEIART+C KYGKTSRN          A+V             CKP+ TQLGFGRYGTKSCRAG LSYRA
Subjt:  IFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSYRA

Query:  IEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST
        IEAA RAII         QF+RNG IWVRVLA+LPITGKPTEVRMGRGKGNPTGWIA VS GQIPFEMDGVSLSNARQAATL AHKPCSST
Subjt:  IEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST

YP_009526555.1 ribosomal protein S3 [Ammopiptanthus mongolicus]2.7e-15075.83Show/hide
Query:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC
        M G N QGRSLDKR+        +SSTSEKKCL EAKKRLTHFIR ANDLRFAGTTKTTISLF FFGATFFF RD    +   FF+D RE LLGQ RIKC
Subjt:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC

Query:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF
        WNLMGKDKV+ELI+KFIDLG IGE IKGIEMMIEIILRNRRIPYGYN YLNEVKKMRS LSNRT TN LIESVKIKSVY+SASPIAQDISF+LR KTRSF
Subjt:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF

Query:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSY
        RSIFS+I KDIPLVMKKGVE IRICCSG+SEGAEIART+C KYGKTSRN          A+V             CKP+ T+LGFGRYGT+SCRAG LSY
Subjt:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSY

Query:  RAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST
        RAIEAA RAII         QF++NG IWVRV A++PITGKPTEVRMGRGKGNPTGWIA VSTGQ+ FEMDGVSLSNARQAATL AHKPCSST
Subjt:  RAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST

TrEMBL top hitse value%identityAlignment
A0A385G296 Ribosomal protein S31.3e-15075.83Show/hide
Query:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC
        M G N QGRSLDKR+        +SSTSEKKCL EAKKRLTHFIR ANDLRFAGTTKTTISLF FFGATFFF RD    +   FF+D RE LLGQ RIKC
Subjt:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC

Query:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF
        WNLMGKDKV+ELI+KFIDLG IGE IKGIEMMIEIILRNRRIPYGYN YLNEVKKMRS LSNRT TN LIESVKIKSVY+SASPIAQDISF+LR KTRSF
Subjt:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF

Query:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSY
        RSIFS+I KDIPLVMKKGVE IRICCSG+SEGAEIART+C KYGKTSRN          A+V             CKP+ T+LGFGRYGT+SCRAG LSY
Subjt:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSY

Query:  RAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST
        RAIEAA RAII         QF++NG IWVRV A++PITGKPTEVRMGRGKGNPTGWIA VSTGQ+ FEMDGVSLSNARQAATL AHKPCSST
Subjt:  RAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST

A0A5C7GR71 Uncharacterized protein3.9e-15075.44Show/hide
Query:  MWGENTQGRSLDKRLQS----------STSEKKCLTEA----KKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLG
        M G N QGRSLDKR++S          S SEKKCL E+    KKRLTHFIRQANDLRFAGTTKTTISLF FFGATFFF RDG   +   FF++ REQLLG
Subjt:  MWGENTQGRSLDKRLQS----------STSEKKCLTEA----KKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLG

Query:  QSRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLR
        + RIKCWNLMGKDKV+ELIEKFI+LGGIGELIKGIEMMIEIILRNRRIPYGYN YLNEVKKMRS LSNRT TN LIESVKIKSVY+SASPIAQDISF+LR
Subjt:  QSRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLR

Query:  NKTRSFRSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCR
        NK RSFRSIFSKI K+IPLVM KGVE IRICCSG+ EGAEIART+C KYGKTSRN          A+V             CKP+ TQLGFGRYGTKS +
Subjt:  NKTRSFRSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCR

Query:  AGHLSYRAIEAA--------HRAIIEQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST
        AG LSYRAIEAA        HRA+  QF+RNG IWVRVLA+LPITGKPTEVRMGRGKGNPTGWIA VSTGQIPFEMDGVSLSNARQAATL AHKPCSST
Subjt:  AGHLSYRAIEAA--------HRAIIEQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST

A0A5N6L0R0 Uncharacterized protein1.1e-15779.13Show/hide
Query:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC
        M G N QGRSLDKR+        +SSTSEKKCL EAKKRLTHFIRQANDLRFAGTTKTTISLF FFGATFFF RDG   +   FF+D REQLLGQ RIKC
Subjt:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC

Query:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF
        WNLMGKD+VIELIEKFIDLGGIGELIKGIEMMIEIILRNR IPYGYN YLNEVKKMRS LSNRTKTN LIESVKIKSVY+SASPIAQDISF+LRNKTRSF
Subjt:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF

Query:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSY
        RSIFSKI KDIPLVMKKGVE IRICCSG+SEGAEIART+C KYGKTSRN          A+V             CKP+ TQLGFGRYG KSCRAG LSY
Subjt:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSY

Query:  RAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST
        RAIEAA RAII         QF+RNG IWVRVLA+LPITGKPTEVRMGRGKGNPTGWIA VS GQIPFEMDGVSLSNARQAATL AHKPCSST
Subjt:  RAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST

A0A6A5LBS7 Uncharacterized protein6.8e-14774.19Show/hide
Query:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAK------KRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLG
        M G N QGRSLDKR+        +SSTSEKK L EAK      KRLTHFIR ANDLRFAGTTKTTISLF FFGATFFF RD    +   FF+D RE LLG
Subjt:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAK------KRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLG

Query:  QSRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLR
        Q RIKCWNLMGKDKV+E I+KFIDLG IGE IKGIEMMIEIILRNRRIPYGYN YLNEVKKMRS LSNRTKTN LIESVKIKSVY+SASPIAQDISF+LR
Subjt:  QSRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLR

Query:  NKTRSFRSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCR
         KTRSFRSI S+I KDIPLVMKKGVE IRICCSG+SEGAEIART+C KYGKTSRN          A+V             CKP+ T+LGFGRYGT+SCR
Subjt:  NKTRSFRSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCR

Query:  AGHLSYRAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST
        AG LSYRAIEAA RAII         QF++NG IWVRV A++PITGKPTEVRMGRGKGNPTGWIA VSTGQ+ FEMDGVSLSNARQAATL AHKPCSST
Subjt:  AGHLSYRAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST

B9TAP3 60S ribosomal protein L16, putative3.0e-15577.61Show/hide
Query:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC
        M G N QGRSLDKR+        +SSTSEK CL+EAKKRLTHFIRQANDLRFAGTTKTTISLF FFGATFFF RDG   +   FF+D REQLLGQ RIKC
Subjt:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC

Query:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF
        WNLMGKDKV+ELIEKFI+LGGIGELIKGIEMMIEIILRNRRIPYGYN YLNE+KKMRS LSNRT TN LIES+K+KSVY+SASPIAQDISF+LRNKTRSF
Subjt:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF

Query:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSY
        RSIFSKI KDIPLVMKKGVE IRICCSG+ EGAEIART+C KYGKTSRN          A+V             CK + TQLGFGRYGTKSC+AG LSY
Subjt:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN----------ADV-------------CKPNDTQLGFGRYGTKSCRAGHLSY

Query:  RAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST
        RAIEAA RAII         QF+RNG IWVRVLA+LPITGKPTEVRMGRGKGNPTGWIA VSTGQIPFEMDGVSLSNARQAATL AHKPCSST
Subjt:  RAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST

SwissProt top hitse value%identityAlignment
P27754 Ribosomal protein S3, mitochondrial8.7e-9973.9Show/hide
Query:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC
        M G N QGRS + R+        +SSTSEKK L E KK L HFIRQ NDLRFAG TKTTISLF FFGATFFF RDG   ++  FF+D REQLLGQ RIKC
Subjt:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC

Query:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF
        W LMGKDKV+ELIEKFIDLGGIGELIKGIE+MIEIILRNRRIPYGYN YLNEVKKMRS LSNRTKTN +IESVKIKSVY+SASPIAQDISF+ RNK RSF
Subjt:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF

Query:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRNADVCK----PNDTQLGFGRYGTK
        RSIFS+I KDIPLVMKKGVE IRICCSG+S+GAEIART+C KYGKTSRN    K    P +    +G  G K
Subjt:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRNADVCK----PNDTQLGFGRYGTK

P27928 Ribosomal protein S3, mitochondrial4.2e-9377.37Show/hide
Query:  QGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKCWNLMGK
        +G SLDKR+        +SSTS+KKCL  AKKRL HFIRQANDLRFAGTTKTTISLF FFGATFFF RDG   +  PF++  REQLLGQ RIKC NLMGK
Subjt:  QGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKCWNLMGK

Query:  DKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSFRSIFSK
        DKV+ELIEKFIDLG IG+LIKGIEMMIEIILR RRIPYGYN YLNEV+KMRS LSNRT TN LIESVKIKSVY+SAS IAQDISF+LRN   SFRSIFSK
Subjt:  DKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSFRSIFSK

Query:  IEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN
        I KDIPL+M KGVE IRICCSG+  GAEIART+C KYGKTS N
Subjt:  IEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN

P46773 Ribosomal protein S3, mitochondrial1.9e-9076.54Show/hide
Query:  QGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKCWNLMGK
        +G SLDKR+        +SSTSEKKCL  AKKRL HFIRQANDLRFAGTTKTTISLF FFGATFFF RDG   +  PFF+  REQLLGQ RIKC NLMGK
Subjt:  QGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKCWNLMGK

Query:  DKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSFRSIFSK
        DKV+ELIEKFI LG IG+LIKGIEMMIEIILR R IPYGYN YLNEV+KMRS LSNRT TN LIESVKIKSVY+SAS IAQDISF+L N   SFRSIFS+
Subjt:  DKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSFRSIFSK

Query:  IEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN
        I KDIPL+M KGVE IRICCSG+  GAEIART+C KYGKTS N
Subjt:  IEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN

Q04716 Ribosomal protein S3, mitochondrial2.6e-10381.12Show/hide
Query:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC
        M G N QGRSLDKR+        ++STSEKKCL EAKKR+THFIRQANDLRFAGTTKTTISLF FFGATFFF RDG   +   FF+D REQLLGQ R KC
Subjt:  MWGENTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDG---FRIPFFKDTREQLLGQSRIKC

Query:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF
        WNLMGKDKV+ELIEKFIDL  IGELI+GIEMMIEIILRNRRIPYGYN+YLNEVKKMRS L NRT TN LIESVKIKSVY+SASPIAQDISF+ RNKTRSF
Subjt:  WNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSF

Query:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN
        RSIFSKI KDIPLVMKKGVE IRICCSG+ EGAEIART+C KYGKTSRN
Subjt:  RSIFSKIEKDIPLVMKKGVERIRICCSGQSEGAEIARTKCRKYGKTSRN

Q95749 Ribosomal protein S3, mitochondrial4.5e-7962.72Show/hide
Query:  NTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDGFRIPFFKDTREQLLGQSRIKCWNLMGKD
        N QGRSL KR+        +S TSEKKCL EAK RLTHFIR ANDLRFAGTTKTTISLF FFGATFFF RDG  +    D REQLL Q R+KCWNL+GKD
Subjt:  NTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDGFRIPFFKDTREQLLGQSRIKCWNLMGKD

Query:  KVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSFRSIFSKI
        K++ELIEK  +LGGI ELIK I+MMIEIILR R IPY YN Y  EVKKMRS LSNRT T  LIESVKIKSVY+SAS IAQDISF+L+NK RSF SIF+KI
Subjt:  KVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSFRSIFSKI

Query:  EKDIPLVMKKGVERIRICCSGQ-SEGAEIARTKCRKYGKTSRNADVCKPNDTQLG-FGRYGTKSCRAGHLSYRAIEAAHRAIIEQFQ
         K+IP    KGVE IRIC SG+  + AE A+TKC K+ KTS N    K +   +  F RYG    +   +SY + +   RAI E ++
Subjt:  EKDIPLVMKKGVERIRICCSGQ-SEGAEIARTKCRKYGKTSRNADVCKPNDTQLG-FGRYGTKSCRAGHLSYRAIEAAHRAIIEQFQ

Arabidopsis top hitse value%identityAlignment
AT2G28830.1 PLANT U-BOX 123.0e-1437.5Show/hide
Query:  RTKCRKYGKTSRNADVCKPNDTQLGF--GRYGTKSCRAGHLSYRAIEAAHRAIIEQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQ
        RTK +K+ +   N  V     +  G+   RY  ++     ++ R IEA  RA+     R  T+ V + A+ P+T +P E RMGRGKG P  W+A V  G+
Subjt:  RTKCRKYGKTSRNADVCKPNDTQLGF--GRYGTKSCRAGHLSYRAIEAAHRAIIEQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQ

Query:  IPFEMDGVSLSNARQAATLA
        I +EM GVS   AR+A ++A
Subjt:  IPFEMDGVSLSNARQAATLA

ATCG00790.1 ribosomal protein L162.2e-1738.71Show/hide
Query:  RTKCRKY------GKTSRNADVCKPNDTQLGFGRYGTKSCRAGHLSYRAIEAAHRAIIEQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACV
        RT+ RK       G +SR   +C        FGRY  ++     ++ R IEA  RA+    +R G IWVR+  + P+T +P E RMG GKG+P  W+A V
Subjt:  RTKCRKY------GKTSRNADVCKPNDTQLGFGRYGTKSCRAGHLSYRAIEAAHRAIIEQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACV

Query:  STGQIPFEMDGVSLSNARQAATLA
          G+I +EM GV  + AR+A ++A
Subjt:  STGQIPFEMDGVSLSNARQAATLA

ATMG00080.1 ribosomal protein L162.2e-4976.87Show/hide
Query:  RTKCRKYGKTSRNADVCKPNDTQLGFGRYGTKSCRAGHLSYRAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIA
        RTK  KY K  R +  CKP+ T+LGFGRYGTKSC+AG LSYRAIEAA RAII         QF+RNG IWVRV A+LPITGKPTEVRMGRGKGNPTGWIA
Subjt:  RTKCRKYGKTSRNADVCKPNDTQLGFGRYGTKSCRAGHLSYRAIEAAHRAII--------EQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIA

Query:  CVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST
         VSTGQIPFEMDGVSL+NARQAATL AHKPCSST
Subjt:  CVSTGQIPFEMDGVSLSNARQAATL-AHKPCSST

ATMG00090.1 structural constituent of ribosome;protein binding1.5e-8270.78Show/hide
Query:  NTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDGFRIPFFKDTREQLLGQSRIKCWNLMGKD
        N QGRSL KR+        +SSTSEKKCL EAK RLTHFIR ANDLRFAGTTKTTISLF FFGATFFF RDG  +    D REQLL Q R+KCWNL+GKD
Subjt:  NTQGRSLDKRL--------QSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDGFRIPFFKDTREQLLGQSRIKCWNLMGKD

Query:  KVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSFRSIFSKI
        K++ELIEK  +LGGI ELIK I+MMIEIILR R IPY YN Y  EVKKMRS LSNRT T  LIESVKIKSVY+SASPIAQDISF+L+NK RSF SIF+KI
Subjt:  KVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSFRSIFSKI

Query:  EKDIPLVMKKGVERIRICCSGQ-SEGAEIARTKCRKYGKTSRN
         K+IP    KGVE IRIC SG+  + AE A+TKC K+ KTSRN
Subjt:  EKDIPLVMKKGVERIRICCSGQ-SEGAEIARTKCRKYGKTSRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGAGAGAATACACAGGGAAGAAGCTTAGATAAGAGATTACAAAGCTCGACCAGCGAGAAAAAGTGTTTGACCGAAGCCAAAAAGAGGTTGACCCACTTCATTCG
CCAAGCGAATGATCTTCGGTTCGCGGGAACAACAAAAACAACCATCTCGCTCTTTCATTTCTTCGGTGCTACCTTTTTCTTTCAAAGGGATGGGTTTCGAATACCGTTTT
TTAAGGATACCCGGGAACAACTCCTAGGTCAATCAAGGATCAAATGTTGGAACCTCATGGGTAAGGATAAGGTAATAGAATTGATAGAGAAATTCATAGACCTAGGTGGG
ATAGGAGAATTGATAAAGGGAATAGAGATGATGATAGAGATCATACTGAGAAACAGAAGAATTCCGTATGGGTACAATTTTTATTTGAACGAAGTGAAAAAAATGCGATC
TTCGTTGTCTAATAGAACAAAGACTAATATTTTAATTGAGTCGGTCAAGATCAAATCTGTTTATCGAAGTGCTTCTCCGATTGCTCAAGACATCTCTTTTAAACTAAGAA
ACAAAACAAGATCATTTCGTTCCATTTTTAGTAAAATAGAAAAGGATATTCCATTAGTAATGAAAAAAGGGGTTGAGAGGATTCGTATATGTTGTTCAGGTCAATCAGAA
GGCGCGGAAATAGCTAGAACTAAATGCAGAAAGTATGGAAAAACATCTCGTAATGCAGATGTTTGCAAACCGAACGATACACAACTTGGTTTTGGAAGATATGGCACTAA
AAGTTGTAGAGCTGGTCATCTTTCATATCGAGCCATTGAAGCTGCGCATCGGGCTATAATCGAACAATTCCAAAGAAATGGTACAATATGGGTAAGAGTTCTGGCAAATC
TCCCTATTACCGGGAAACCTACAGAAGTCAGAATGGGAAGAGGAAAAGGAAATCCTACGGGTTGGATTGCTTGTGTGTCCACGGGACAAATCCCATTTGAAATGGATGGT
GTGAGTTTGTCAAATGCTCGACAAGCTGCTACATTAGCACATAAACCATGTTCGTCAACCAATGGGGATAAACCAAGTCAGGATTCAAATGAATTGGGCGAATCACACTT
CGGTCTCAACATGCTGGGCCAAGGAAGTGTCCGGTTTCCAACATCCCCTACCATCACTACAATTAATGCTATTAAGACTTTTTGGCTTTGTGAGGAAGAACCTAGAGAGG
AAGCTCCATTGAAAGAAGAAGAGGAAATAAGACTCGAGTTTCTGGAAATATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGAGAGAATACACAGGGAAGAAGCTTAGATAAGAGATTACAAAGCTCGACCAGCGAGAAAAAGTGTTTGACCGAAGCCAAAAAGAGGTTGACCCACTTCATTCG
CCAAGCGAATGATCTTCGGTTCGCGGGAACAACAAAAACAACCATCTCGCTCTTTCATTTCTTCGGTGCTACCTTTTTCTTTCAAAGGGATGGGTTTCGAATACCGTTTT
TTAAGGATACCCGGGAACAACTCCTAGGTCAATCAAGGATCAAATGTTGGAACCTCATGGGTAAGGATAAGGTAATAGAATTGATAGAGAAATTCATAGACCTAGGTGGG
ATAGGAGAATTGATAAAGGGAATAGAGATGATGATAGAGATCATACTGAGAAACAGAAGAATTCCGTATGGGTACAATTTTTATTTGAACGAAGTGAAAAAAATGCGATC
TTCGTTGTCTAATAGAACAAAGACTAATATTTTAATTGAGTCGGTCAAGATCAAATCTGTTTATCGAAGTGCTTCTCCGATTGCTCAAGACATCTCTTTTAAACTAAGAA
ACAAAACAAGATCATTTCGTTCCATTTTTAGTAAAATAGAAAAGGATATTCCATTAGTAATGAAAAAAGGGGTTGAGAGGATTCGTATATGTTGTTCAGGTCAATCAGAA
GGCGCGGAAATAGCTAGAACTAAATGCAGAAAGTATGGAAAAACATCTCGTAATGCAGATGTTTGCAAACCGAACGATACACAACTTGGTTTTGGAAGATATGGCACTAA
AAGTTGTAGAGCTGGTCATCTTTCATATCGAGCCATTGAAGCTGCGCATCGGGCTATAATCGAACAATTCCAAAGAAATGGTACAATATGGGTAAGAGTTCTGGCAAATC
TCCCTATTACCGGGAAACCTACAGAAGTCAGAATGGGAAGAGGAAAAGGAAATCCTACGGGTTGGATTGCTTGTGTGTCCACGGGACAAATCCCATTTGAAATGGATGGT
GTGAGTTTGTCAAATGCTCGACAAGCTGCTACATTAGCACATAAACCATGTTCGTCAACCAATGGGGATAAACCAAGTCAGGATTCAAATGAATTGGGCGAATCACACTT
CGGTCTCAACATGCTGGGCCAAGGAAGTGTCCGGTTTCCAACATCCCCTACCATCACTACAATTAATGCTATTAAGACTTTTTGGCTTTGTGAGGAAGAACCTAGAGAGG
AAGCTCCATTGAAAGAAGAAGAGGAAATAAGACTCGAGTTTCTGGAAATATTTTGA
Protein sequenceShow/hide protein sequence
MWGENTQGRSLDKRLQSSTSEKKCLTEAKKRLTHFIRQANDLRFAGTTKTTISLFHFFGATFFFQRDGFRIPFFKDTREQLLGQSRIKCWNLMGKDKVIELIEKFIDLGG
IGELIKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSSLSNRTKTNILIESVKIKSVYRSASPIAQDISFKLRNKTRSFRSIFSKIEKDIPLVMKKGVERIRICCSGQSE
GAEIARTKCRKYGKTSRNADVCKPNDTQLGFGRYGTKSCRAGHLSYRAIEAAHRAIIEQFQRNGTIWVRVLANLPITGKPTEVRMGRGKGNPTGWIACVSTGQIPFEMDG
VSLSNARQAATLAHKPCSSTNGDKPSQDSNELGESHFGLNMLGQGSVRFPTSPTITTINAIKTFWLCEEEPREEAPLKEEEEIRLEFLEIF