CuGenDBv2

Gene ID	Clc08G16230
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	succinate dehydrogenase subunit 5, mitochondrial-like
Genome location	ClcChr08:26810780..26813331
RNA-Seq Expression	Clc08G16230
Synteny	Clc08G16230
Gene Ontology terms	GO:0006099 - tricarboxylic acid cycle (biological process) GO:0045273 - respiratory chain complex II (cellular component)
InterPro domains	IPR025397 - Succinate dehydrogenase subunit 5, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6598386.1 Succinate dehydrogenase subunit 5, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-103

71.67

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Query:  MVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASWDQL
        MVILRSLLRSVRARSY IAGVTHRNLLQS+HQAARS F LSSHRSSFSD P RVSSDCGYLSGV HARFFSVDVV+MPTIGD+KLQN FK+LMAASWD L
Subjt:  MVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASWDQL

Query:  PEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVETEL
        PE+VVYDVKAALSGST+DKAGKEIVENV RAAEA E+FGDIL+NLKME+DDSIG+SGEDVKPLSDELK AL T +DRYTAYLD+FGPEE YLRKKVETEL
Subjt:  PEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVETEL

Query:  GRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS
        G KMIYLKMRCSGLGSEWGK                                                       VSVLGTSGLSGSYVEQR+
Subjt:  GRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS

XP_004152731.1 succinate dehydrogenase subunit 5, mitochondrial [Cucumis sativus]

9.5e-105

71.62

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Query:  MEKMVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASW
        MEK VILRSLLRSVRARSY IAGVTHRNLLQSNHQ ARS FYLSSHR SFSDSPQRVSSDC Y SGVGHAR+FS DVVSMPTI D KLQNVFK+LMAASW
Subjt:  MEKMVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASW

Query:  DQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVE
        D+LPEAV+YDVK ALSGSTDDKAGKEIVENV RAAEA EEFGD+L+NLKME+DDSIGLSGE+VKPLSDELK AL+T H+RY AYLDSFGPEE YLRKKVE
Subjt:  DQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVE

Query:  TELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS
        TELG KMIYLKMRCSGLGSEWGK                                                       VSVLGTSGLSGSYVEQR+
Subjt:  TELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS

XP_022962336.1 succinate dehydrogenase subunit 5, mitochondrial-like [Cucurbita moschata]

5.8e-102

71.43

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Query:  MVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSS-DCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASWDQ
        MVILRSLLRSVRARSY IAGVTHRNLLQS+HQAARS F LSSHRSSFSD P RVSS DCGYLSGV HARFFSVDVV+MPTIGD+KLQN FK+LMAASWD 
Subjt:  MVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSS-DCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASWDQ

Query:  LPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVETE
        LPE+VVYDVKAALSGST+DKAGKEIVENV RAAEA E+FGDIL+NLKME+DDSIG+SGEDVKPLSDELK AL T +DRYTAYLD+FGPEE YLRKKVETE
Subjt:  LPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVETE

Query:  LGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS
        LG KMIYLKMRCSGLGSEWGK                                                       VSVLGTSGLSGSYVEQR+
Subjt:  LGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS

XP_023546793.1 succinate dehydrogenase subunit 5, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo]

2.6e-102

71.33

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Query:  MVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASWDQL
        MVILRSLLRSVRARSY IAGVTHRNLLQS+ QAARS F LSSHRSSFSD P RVSSDCGYLSGV HARFFSVDVV+MPTIGD+KLQN FK+LMAASWD L
Subjt:  MVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASWDQL

Query:  PEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVETEL
        PE+VVYDVKAALSGST+DKAGKEIVENV RAAEA E+FGDIL+NLKME+DDSIG+SGEDVKPLSDELK AL T +DRYTAYLD+FGPEE YLRKKVETEL
Subjt:  PEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVETEL

Query:  GRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS
        G KMIYLKMRCSGLGSEWGK                                                       VSVLGTSGLSGSYVEQR+
Subjt:  GRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS

XP_038884886.1 succinate dehydrogenase subunit 5, mitochondrial [Benincasa hispida]

4.6e-107

72.64

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Query:  MEKMVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASW
        MEKMVILRSLLRSVRARSYAIAGVT+RNLLQSNHQAARS FYLSSHRSSFSDSPQ+VSSDCGYLSGVGHARFFSVDVVSMPTIGDS L+N FK+LMAASW
Subjt:  MEKMVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASW

Query:  DQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVE
        D+LPE++VYDVKAAL+GSTDDKAGKEIVENV RAAEA EEFG IL+++KME+DDSIGLSGEDVKP+SDELKNAL T HDRY  YLDSFGPEE YLRKKVE
Subjt:  DQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVE

Query:  TELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS
        TELG KMIYLKMRCSGLGSEWGK                                                       VSVLGTSGLSGSYVEQR+
Subjt:  TELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LP60 Uncharacterized protein

4.6e-105

71.62

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Query:  MEKMVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASW
        MEK VILRSLLRSVRARSY IAGVTHRNLLQSNHQ ARS FYLSSHR SFSDSPQRVSSDC Y SGVGHAR+FS DVVSMPTI D KLQNVFK+LMAASW
Subjt:  MEKMVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASW

Query:  DQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVE
        D+LPEAV+YDVK ALSGSTDDKAGKEIVENV RAAEA EEFGD+L+NLKME+DDSIGLSGE+VKPLSDELK AL+T H+RY AYLDSFGPEE YLRKKVE
Subjt:  DQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVE

Query:  TELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS
        TELG KMIYLKMRCSGLGSEWGK                                                       VSVLGTSGLSGSYVEQR+
Subjt:  TELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS

A0A1S3BAR6 succinate dehydrogenase subunit 5, mitochondrial

2.4e-101

69.93

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Query:  MEKMVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASW
        MEK VILRSLLRSVRARSY IAGVTHRNLLQSNHQ ARS+FYLSSHRSSFSDSPQRVS DC Y SGVGHAR+FS DVVSMP I D KL  VFK+LMAASW
Subjt:  MEKMVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASW

Query:  DQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVE
        D+LPE V+Y+ K ALSGSTDDKAGKEIVENV RAA A EEFGDIL+NLKME+DDSIGLSGE+VKPLSDELK AL+T HDRY AYLDSFGPEE YLRKKVE
Subjt:  DQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVE

Query:  TELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS
        TELG KMIYLKMRCSGLGSEWGK                                                       VSVLGTSGLSGSYVEQR+
Subjt:  TELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS

A0A6J1C282 succinate dehydrogenase subunit 5, mitochondrial-like isoform X1

2.0e-100

69.26

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Query:  MEKMVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASW
        MEKMVILRSLLRSVR  SY +AGV HRNLLQS+HQAARS FYLSSHRSS SD PQRVSSDC YLSGVG AR FSVDVV M TI DSKLQNVFK+LMA SW
Subjt:  MEKMVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASW

Query:  DQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVE
        D+LP +VVYDVKAALSGSTDDKAGKE+VENV RAAEAVEEFG IL++LKM++DDSIGLSGEDVKPLSDELKNAL+T HDRYT YLD+FGPEE YLRKKVE
Subjt:  DQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVE

Query:  TELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS
        T+LG KMIYLK+RCSGLGSEWGK                                                       VSVLGTSGLSGSYVEQR+
Subjt:  TELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS

A0A6J1CS25 succinate dehydrogenase subunit 5, mitochondrial-like isoform X1

4.8e-102

69.93

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Query:  MEKMVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASW
        MEKM+ILRSLLRSVR  SY +AGV HRNLLQS+HQAARSLF+LSSHRSS SDS QRVSSDCGY SGVG  RFFSVDVV MPTI DSKLQNVFK+LMA SW
Subjt:  MEKMVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASW

Query:  DQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVE
        D+LP ++VYDVKAALSGSTDDKAGKE+VENV RAAEAVEEFG IL+NLKM++DDSIGLSGEDVKPLSDELKNAL+T HDRYT YLD+FGPEE YLRKKVE
Subjt:  DQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVE

Query:  TELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS
        TELG KMIYLKMRCSGLGSEWGK                                                       VSVLGTSGLSGSYVEQR+
Subjt:  TELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS

A0A6J1HCU3 succinate dehydrogenase subunit 5, mitochondrial-like

2.8e-102

71.43

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Query:  MVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSS-DCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASWDQ
        MVILRSLLRSVRARSY IAGVTHRNLLQS+HQAARS F LSSHRSSFSD P RVSS DCGYLSGV HARFFSVDVV+MPTIGD+KLQN FK+LMAASWD 
Subjt:  MVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSS-DCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASWDQ

Query:  LPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVETE
        LPE+VVYDVKAALSGST+DKAGKEIVENV RAAEA E+FGDIL+NLKME+DDSIG+SGEDVKPLSDELK AL T +DRYTAYLD+FGPEE YLRKKVETE
Subjt:  LPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVETE

Query:  LGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS
        LG KMIYLKMRCSGLGSEWGK                                                       VSVLGTSGLSGSYVEQR+
Subjt:  LGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS

SwissProt top hits

e value

%identity

Alignment

Q0JDA2 Succinate dehydrogenase subunit 5, mitochondrial

3.3e-44

48.77

Show/hide

Query:  RNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHA------RFFSVDVVSMPTIGDSKLQNVFKELMAASWDQLPEAVVYDVKAALSGSTD
        R LL+ +  A  +L   SS  ++ +   + +++    +SG  +A      R FS +   +P I D ++++ FK+LMAASW  LP+++V + K A S +TD
Subjt:  RNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHA------RFFSVDVVSMPTIGDSKLQNVFKELMAASWDQLPEAVVYDVKAALSGSTD

Query:  DKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVETELGRKMIYLKMRCSGLGSE
        DKAGKE + NV RAAEA EEFG +L+ L+M LDD  G++GE+V PL   +++A+ +A+ RY  YL+SFGPEE YLRKKVE ELG KMI+LKMRCSG+GSE
Subjt:  DKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVETELGRKMIYLKMRCSGLGSE

Query:  WGK
        WGK
Subjt:  WGK

Q9SX77 Succinate dehydrogenase subunit 5, mitochondrial

6.5e-56

45.7

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Query:  RARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQ------------------RVSSDCGY--LSGVGHARFFSVDVVSMPTIGDSKLQNVFKE
        R R  A A     +LLQ +H   +   +LS HR+  + +P                    VS D  Y    G+G  R FS DV  MP + DS + N FK+
Subjt:  RARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQ------------------RVSSDCGY--LSGVGHARFFSVDVVSMPTIGDSKLQNVFKE

Query:  LMAASWDQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVY
        LMAA W +LP AVV D K A+S +TDDKAG+E ++NV RAAEAVEEFG IL ++KME+DDSIG+SGE VKPL +++ +AL TA+ RY  YLDSF PEEVY
Subjt:  LMAASWDQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVY

Query:  LRKKVETELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQ
        L+KKVE ELG KMI+LKMRCSGLGSEWGK                                                       V+VLGTSGLSGSYVEQ
Subjt:  LRKKVETELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQ

Query:  RS
        R+
Subjt:  RS

Arabidopsis top hits

e value

%identity

Alignment

AT1G47420.1 succinate dehydrogenase 5

4.6e-57

45.7

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Query:  RARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQ------------------RVSSDCGY--LSGVGHARFFSVDVVSMPTIGDSKLQNVFKE
        R R  A A     +LLQ +H   +   +LS HR+  + +P                    VS D  Y    G+G  R FS DV  MP + DS + N FK+
Subjt:  RARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQ------------------RVSSDCGY--LSGVGHARFFSVDVVSMPTIGDSKLQNVFKE

Query:  LMAASWDQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVY
        LMAA W +LP AVV D K A+S +TDDKAG+E ++NV RAAEAVEEFG IL ++KME+DDSIG+SGE VKPL +++ +AL TA+ RY  YLDSF PEEVY
Subjt:  LMAASWDQLPEAVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVY

Query:  LRKKVETELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQ
        L+KKVE ELG KMI+LKMRCSGLGSEWGK                                                       V+VLGTSGLSGSYVEQ
Subjt:  LRKKVETELGRKMIYLKMRCSGLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQ

Query:  RS
        R+
Subjt:  RS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGGGGGAAAGTCATGGAGAAAATGGTGATTCTTAGATCACTATTGCGTTCTGTTCGCGCCAGATCTTACGCCATCGCCGGAGTCACTCACCGGAATTTACTGCAAAG
TAATCATCAGGCTGCCCGAAGTCTCTTCTATCTGTCTTCCCATCGTTCTTCTTTCTCAGATTCTCCACAGAGAGTTTCTTCTGATTGTGGGTATCTATCTGGTGTAGGGC
ACGCTAGATTTTTTAGTGTTGATGTAGTTAGTATGCCTACAATTGGAGATTCCAAGCTTCAGAATGTTTTCAAGGAATTGATGGCTGCAAGTTGGGATCAGCTTCCTGAG
GCGGTTGTCTATGATGTAAAGGCTGCGTTATCTGGAAGCACTGATGACAAGGCTGGAAAGGAGATTGTGGAAAATGTTCTCCGAGCGGCTGAAGCAGTTGAGGAGTTTGG
TGATATACTTATGAACTTGAAAATGGAATTGGATGATAGCATTGGTCTCAGTGGCGAGGATGTTAAGCCTTTGTCCGATGAGCTTAAGAATGCCCTGTATACAGCTCATG
ATCGCTATACAGCCTACTTGGATTCATTTGGTCCTGAGGAAGTGTATCTGCGGAAGAAAGTGGAAACAGAGTTAGGAAGAAAGATGATATACTTAAAAATGAGATGCAGT
GGTCTTGGGTCTGAGTGGGGGAAGAATTACCGTCTAAGAATTCTTACATCATTGCATTATAAAAGGGTGGAGTCTTTTGATCACCATGTGTTAAACTTAAACCGGAAAGG
AAGCTTATATGGGAATACTGGGCTAGGACTTCGGTGCCTCATCTTTGTTCACTTTTCTAAGCCGTGCAGATTAATACATGTTTCTGTGCTGGGAACCTCTGGTCTGTCAG
GGTCATATGTTGAGCAAAGATCATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRGKVMEKMVILRSLLRSVRARSYAIAGVTHRNLLQSNHQAARSLFYLSSHRSSFSDSPQRVSSDCGYLSGVGHARFFSVDVVSMPTIGDSKLQNVFKELMAASWDQLPE
AVVYDVKAALSGSTDDKAGKEIVENVLRAAEAVEEFGDILMNLKMELDDSIGLSGEDVKPLSDELKNALYTAHDRYTAYLDSFGPEEVYLRKKVETELGRKMIYLKMRCS
GLGSEWGKNYRLRILTSLHYKRVESFDHHVLNLNRKGSLYGNTGLGLRCLIFVHFSKPCRLIHVSVLGTSGLSGSYVEQRS

Clc08G16230 (gene) of Watermelon (cordophanus) v2 genome