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Clc08G16370 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G16370
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptioncalmodulin-like
Genome locationClcChr08:26884638..26885407
RNA-Seq ExpressionClc08G16370
SyntenyClc08G16370
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060886.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]1.5e-3491.36Show/hide
Query:  MACHGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEK
        MA HGVSK +FSREEMKEIFREHDIDGDGYLSI ELIKAMGFLGHSIPFYKAHYGMAYSDENGDG ISEDELDKLIDY E+
Subjt:  MACHGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEK

KAA0060892.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]5.1e-2770.37Show/hide
Query:  SKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEKFQYNKR
        SKL  SRE++KEIFREHDIDGDG LS+SE++KA GF G  +PFYKAHYGMA++DENGDG+I E+ELDKL+DY EKFQ+ ++
Subjt:  SKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEKFQYNKR

KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]6.3e-2565.43Show/hide
Query:  SKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEKFQYNKR
        ++L  SRE++KEIFREHDIDGDG LS++E++KA G  G  +PFYKAHYGMA++DENGDGFI E+ELDKL+DY +KFQ+ ++
Subjt:  SKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEKFQYNKR

KGN62525.1 hypothetical protein Csa_022453 [Cucumis sativus]2.3e-3587.36Show/hide
Query:  MACHGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEKFQYNKR
        MA  GVSK +FSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAY DENGDG ISEDELDKLIDY E+FQ  +R
Subjt:  MACHGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEKFQYNKR

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]6.3e-2565.43Show/hide
Query:  SKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEKFQYNKR
        ++L  SRE++KEIFREHDIDGDG LS++E++KA G  G  +PFYKAHYGMA++DENGDGFI E+ELDKL+DY +KFQ+ ++
Subjt:  SKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEKFQYNKR

TrEMBL top hitse value%identityAlignment
A0A0A0LKX1 Uncharacterized protein1.1e-3587.36Show/hide
Query:  MACHGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEKFQYNKR
        MA  GVSK +FSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAY DENGDG ISEDELDKLIDY E+FQ  +R
Subjt:  MACHGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEKFQYNKR

A0A0A0LRC1 Uncharacterized protein3.0e-2565.43Show/hide
Query:  SKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEKFQYNKR
        ++L  SRE++KEIFREHDIDGDG LS++E++KA G  G  +PFYKAHYGMA++DENGDGFI E+ELDKL+DY +KFQ+ ++
Subjt:  SKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEKFQYNKR

A0A5A7UYC0 Putative calcium-binding protein CML102.5e-2770.37Show/hide
Query:  SKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEKFQYNKR
        SKL  SRE++KEIFREHDIDGDG LS+SE++KA GF G  +PFYKAHYGMA++DENGDG+I E+ELDKL+DY EKFQ+ ++
Subjt:  SKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEKFQYNKR

A0A5A7V2Z9 Putative calcium-binding protein CML107.2e-3591.36Show/hide
Query:  MACHGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEK
        MA HGVSK +FSREEMKEIFREHDIDGDGYLSI ELIKAMGFLGHSIPFYKAHYGMAYSDENGDG ISEDELDKLIDY E+
Subjt:  MACHGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEK

A0A6J1CSH1 probable calcium-binding protein CML151.1e-2270.27Show/hide
Query:  KLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEK
        K+ FSR ++KEIF EHDIDGDG LS+SELIKA  FLG  IP YKAHYG+A++D++GDG ISE+ELDKL+DY EK
Subjt:  KLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEK

SwissProt top hitse value%identityAlignment
O64943 Polcalcin Jun o 22.2e-0434.29Show/hide
Query:  ACHGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDE
        AC G   +  S  E++E+F++ D +GDG +S SEL   +  LG  +   +    M  +D +GDG++S  E
Subjt:  ACHGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDE

Q5ZD81 Probable calcium-binding protein CML125.7e-0537.1Show/hide
Query:  EMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLI
        E+ E FR  D DG+G++S +EL ++M  +GH I + +    M  +D +GDG IS +E   ++
Subjt:  EMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLI

Q8RZB5 Probable calcium-binding protein CML108.8e-0641.89Show/hide
Query:  ACHGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKL
        A  G S      EEM+ +FR+ D +GDG +S SEL      LGH+    +    MA +D +GDGFIS DE   L
Subjt:  ACHGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKL

Q8X187 Calmodulin1.7e-0438.46Show/hide
Query:  SREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLI
        S EE+KE F+  D DG+GY+S +EL   M  LG  +   +    +  +D +GDG I+ DE  K++
Subjt:  SREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLI

Q9FYK2 Probable calcium-binding protein CML252.2e-0434.43Show/hide
Query:  EMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKL
        E++ +F++ D++GDG +S  EL   M  LGH +P  +    +   D  GDG+I+ +E  +L
Subjt:  EMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKL

Arabidopsis top hitse value%identityAlignment
AT1G18530.1 EF hand calcium-binding protein family3.4e-0534.92Show/hide
Query:  EEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLI
        E++ EIF+  D DG+G++S +EL  AM  +G  + + +    +  +D NGDG IS  E   ++
Subjt:  EEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLI

AT1G24620.1 EF hand calcium-binding protein family1.5e-0534.43Show/hide
Query:  EMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKL
        E++ +F++ D++GDG +S  EL   M  LGH +P  +    +   D  GDG+I+ +E  +L
Subjt:  EMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKL

AT1G32250.1 Calcium-binding EF-hand family protein4.5e-0531.34Show/hide
Query:  FSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLID
        ++ E++  +FR  D DG+G+++ +EL  +M  LGH++   +    +  +D +GDG I+  E  K I+
Subjt:  FSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLID

AT3G03000.1 EF hand calcium-binding protein family2.6e-0533.33Show/hide
Query:  KLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLI
        K  ++ +++K IFR  D DG+GY++ +EL  +M  LGH++   +    +  +D +GDG I   E  + I
Subjt:  KLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLI

AT3G51920.1 calmodulin 92.6e-0538.1Show/hide
Query:  EEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLI
        +E+ E+FR  D DGDG +S  EL + M  +G  I   +A + +  +D +GDGF+S  E  K++
Subjt:  EEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTCATGGTGTAAGCAAGCTCCATTTCTCCAGGGAAGAGATGAAGGAAATCTTCCGAGAGCACGACATCGACGGAGACGGTTACCTCAGCATCAGTGAGCTCAT
CAAAGCCATGGGGTTTTTGGGTCACTCTATACCATTCTACAAAGCTCATTACGGTATGGCTTATTCTGATGAGAATGGTGACGGCTTCATCTCTGAAGATGAGCTTGACA
AACTCATTGATTATGTCGAAAAGTTTCAGTACAATAAGCGTTAA
mRNA sequenceShow/hide mRNA sequence
AAATACCCCAAAACACATACTCAAACTCACAATCCCAAACGCAGTAAACAAAACAAAGCTCCTTCACAAAAAAAATGGCTTGTCATGGTGTAAGCAAGCTCCATTTCTCC
AGGGAAGAGATGAAGGAAATCTTCCGAGAGCACGACATCGACGGAGACGGTTACCTCAGCATCAGTGAGCTCATCAAAGCCATGGGGTTTTTGGGTCACTCTATACCATT
CTACAAAGCTCATTACGGTATGGCTTATTCTGATGAGAATGGTGACGGCTTCATCTCTGAAGATGAGCTTGACAAACTCATTGATTATGTCGAAAAGTTTCAGTACAATA
AGCGTTAAGAAAATTGGCAACACCACCCTATGTTTTTGTACTACTCTATTGTTCTTAAGTTTTTGAATTTCAGTAATAAAGGAAAGAAGGGCTGGCTTGGGCAAGCTACT
CCTTTTGTTTGTGAAATCTTGATAAGAAATGGAAAAGGGCTTGTAATATCTTTTGGCTCATATATAGTATATATTAGTGATTGAGAGACCTATGATTTAAAATTTACCTA
TGGTACTAGAAAAAAATGATTCTAAAAGTTCTAAAAGTATTATAAAAAAATGGTTAATGAATAAAAAGTATTAGTATATTTTGAAACCTAACAAAATTTGTTACCAAAAC
TTCAAATACTAAGCATATTTTTGTGGAAAGTAATTTTATGAGAAGTGTTTAAATGAGAAGGTATTCTAAAATTACGTAATTTTTAATGGCTAGTCCACACATTTTTTCAG
Protein sequenceShow/hide protein sequence
MACHGVSKLHFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYSDENGDGFISEDELDKLIDYVEKFQYNKR