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Clc08G16430 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G16430
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:26926868..26927232
RNA-Seq ExpressionClc08G16430
SyntenyClc08G16430
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060897.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]1.9e-0766Show/hide
Query:  KLTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVYV
        KLTKE+L R F+YLGS  +  RV  ALRAVD N DG+IS+++MSKLIVYV
Subjt:  KLTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVYV
KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]1.4e-0766.67Show/hide
Query:  LTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVY
        LTKE+LK+ FEYLGS  S FRV  ALRA DTN DG+IS+++M KLI Y
Subjt:  LTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVY
KAE8652092.1 hypothetical protein Csa_021918 [Cucumis sativus]1.0e-0868Show/hide
Query:  KLTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVYV
        KLTKE+L R F YLGS  +  RV  A+RAVD NHDG+ISL++MSKLIVYV
Subjt:  KLTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVYV
KAG7020566.1 hypothetical protein SDJN02_17252, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-0850Show/hide
Query:  KLLQYTK-IAKTTLEQDIKS------WKLTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVY
        KL+QYTK +++  L    KS       KL+KE+LK+ F YLGS  S FR   ALR VD NHDG++S+++M+KLI Y
Subjt:  KLLQYTK-IAKTTLEQDIKS------WKLTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVY
XP_023538265.1 probable calcium-binding protein CML15 [Cucurbita pepo subsp. pepo]4.2e-0759.18Show/hide
Query:  KLTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVY
        KL+KE+LK+ F YLGS  S FR   ALR VD NHDG++S+++M+KLI Y
Subjt:  KLTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVY
TrEMBL top hitse value%identityAlignment
A0A0A0LL93 Uncharacterized protein4.8e-0968Show/hide
Query:  KLTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVYV
        KLTKE+L R F YLGS  +  RV  A+RAVD NHDG+ISL++MSKLIVYV
Subjt:  KLTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVYV
A0A0A0LP43 Uncharacterized protein6.5e-0659.18Show/hide
Query:  KLTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVY
        +LTKE+LK  F+YLG   +TFRV+ AL A D N D +IS E+MSKLI+Y
Subjt:  KLTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVY
A0A0A0LRB6 Uncharacterized protein2.7e-0764.58Show/hide
Query:  LTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVY
        LTKE+LK+ FEYLGS    FRV  ALRA DTN DG+IS+++M KLI Y
Subjt:  LTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVY
A0A5A7V219 Putative calcium-binding protein CML109.1e-0866Show/hide
Query:  KLTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVYV
        KLTKE+L R F+YLGS  +  RV  ALRAVD N DG+IS+++MSKLIVYV
Subjt:  KLTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVYV
A0A5A7V5B0 Putative Calcium-binding EF-hand family protein7.0e-0866.67Show/hide
Query:  LTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVY
        LTKE+LK+ FEYLGS  S FRV  ALRA DTN DG+IS+++M KLI Y
Subjt:  LTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCTTCCATATGGAAATTATTACAATATACGAAGATTGCAAAAACAACCTTAGAACAAGACATAAAATCATGGAAGCTGACCAAAGAAGATTTGAAGAGAGGCTT
TGAGTATTTGGGTTCGAGTTCCAGCACCTTCAGAGTCAACAGCGCCCTTCGTGCCGTCGACACTAACCATGACGGCATCATCAGTTTGGAGAAGATGAGTAAGCTCATTG
TGTACGTCACACTTGGCCATACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCTTCCATATGGAAATTATTACAATATACGAAGATTGCAAAAACAACCTTAGAACAAGACATAAAATCATGGAAGCTGACCAAAGAAGATTTGAAGAGAGGCTT
TGAGTATTTGGGTTCGAGTTCCAGCACCTTCAGAGTCAACAGCGCCCTTCGTGCCGTCGACACTAACCATGACGGCATCATCAGTTTGGAGAAGATGAGTAAGCTCATTG
TGTACGTCACACTTGGCCATACTTAA
Protein sequenceShow/hide protein sequence
MISSIWKLLQYTKIAKTTLEQDIKSWKLTKEDLKRGFEYLGSSSSTFRVNSALRAVDTNHDGIISLEKMSKLIVYVTLGHT