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Clc08G16760 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G16760
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEarly dehydration inducible protein
Genome locationClcChr08:27198347..27199186
RNA-Seq ExpressionClc08G16760
SyntenyClc08G16760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060924.1 hypothetical protein E6C27_scaffold501G00570 [Cucumis melo var. makuwa]7.1e-1368.24Show/hide
Query:  MHQSQ--GSEKLN-EEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQA--HGSGVTGSAAAAVGNALGSARDAVFGKGK
        MHQSQ   SEK+N EEGAI TKV            Q+EPTNE TTVVHLTRKQ    GSGV GSAAAAVGNAL SA+DAVFGKGK
Subjt:  MHQSQ--GSEKLN-EEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQA--HGSGVTGSAAAAVGNALGSARDAVFGKGK

KAB1220313.1 hypothetical protein CJ030_MR3G019059 [Morella rubra]1.9e-1052.94Show/hide
Query:  MHQSQGSEKLNEEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQAH----GSGVTGSAAAAVGNALGSARDAVFGKGKD
        M++S+G+E++NE+GAIETKV+T D RSP GQ++ EP  E  TVVHLTR +      GS + G+A AA  N + SA++A+FG GKD
Subjt:  MHQSQGSEKLNEEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQAH----GSGVTGSAAAAVGNALGSARDAVFGKGKD

KAE8652073.1 hypothetical protein Csa_018632 [Cucumis sativus]3.5e-1265.88Show/hide
Query:  MHQSQ--GSEKLN-EEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQA--HGSGVTGSAAAAVGNALGSARDAVFGKGK
        MHQSQ   S+K+N EEGAIETKV          + Q+EP NE TTVVHLTRKQ    GSGV GSAA AVGNAL SA+DAVFGKGK
Subjt:  MHQSQ--GSEKLN-EEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQA--HGSGVTGSAAAAVGNALGSARDAVFGKGK

KAG6585682.1 hypothetical protein SDJN03_18415, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2273.81Show/hide
Query:  MHQSQGSEKLNEEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQ---AHGSGVTGSAAAAVGNALGSARDAVFGKGKD
        MHQSQGSEK+NEEGAIETKV+T+D+RSPPGQ++ EP NE+TTVVHLTRKQ   + G GV GSAAAAV N L SA+DA+FGKGK+
Subjt:  MHQSQGSEKLNEEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQ---AHGSGVTGSAAAAVGNALGSARDAVFGKGKD

KDP41684.1 hypothetical protein JCGZ_16091 [Jatropha curcas]6.7e-1156.79Show/hide
Query:  SQGSEKLNEEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQ---AHGSGVTGSAAAAVGNALGSARDAVFGKGKD
        SQG+E++NEEGAIETKVDT+D RS   Q   EP  E+  VVHLTR++     G G+    AAAV N L SA+DAV G+GKD
Subjt:  SQGSEKLNEEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQ---AHGSGVTGSAAAAVGNALGSARDAVFGKGKD

TrEMBL top hitse value%identityAlignment
A0A067LC75 Uncharacterized protein3.2e-1156.79Show/hide
Query:  SQGSEKLNEEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQ---AHGSGVTGSAAAAVGNALGSARDAVFGKGKD
        SQG+E++NEEGAIETKVDT+D RS   Q   EP  E+  VVHLTR++     G G+    AAAV N L SA+DAV G+GKD
Subjt:  SQGSEKLNEEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQ---AHGSGVTGSAAAAVGNALGSARDAVFGKGKD

A0A0A0LR80 Uncharacterized protein8.5e-1263.41Show/hide
Query:  HQSQGSEKLN-EEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQA--HGSGVTGSAAAAVGNALGSARDAVFGKGK
        H++  S+K+N EEGAIETKV          + Q+EP NE TTVVHLTRKQ    GSGV GSAA AVGNAL SA+DAVFGKGK
Subjt:  HQSQGSEKLN-EEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQA--HGSGVTGSAAAAVGNALGSARDAVFGKGK

A0A2P5EGM5 Uncharacterized protein1.2e-1050.59Show/hide
Query:  MHQSQGSEKLNEEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQA----HGSGVTGSAAAAVGNALGSARDAVFGKGKD
        M+ S+G E++NE  A+E+KV+T+D R+PPG+   EP  E   VVHLTRK A     G GV   AAAAV N L SA+DA+   G+D
Subjt:  MHQSQGSEKLNEEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQA----HGSGVTGSAAAAVGNALGSARDAVFGKGKD

A0A5A7V0S3 Uncharacterized protein3.4e-1368.24Show/hide
Query:  MHQSQ--GSEKLN-EEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQA--HGSGVTGSAAAAVGNALGSARDAVFGKGK
        MHQSQ   SEK+N EEGAI TKV            Q+EPTNE TTVVHLTRKQ    GSGV GSAAAAVGNAL SA+DAVFGKGK
Subjt:  MHQSQ--GSEKLN-EEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQA--HGSGVTGSAAAAVGNALGSARDAVFGKGK

A0A6A1W5Z9 Uncharacterized protein9.4e-1152.94Show/hide
Query:  MHQSQGSEKLNEEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQAH----GSGVTGSAAAAVGNALGSARDAVFGKGKD
        M++S+G+E++NE+GAIETKV+T D RSP GQ++ EP  E  TVVHLTR +      GS + G+A AA  N + SA++A+FG GKD
Subjt:  MHQSQGSEKLNEEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQAH----GSGVTGSAAAAVGNALGSARDAVFGKGKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCAATCCCAGGGGTCGGAGAAGCTAAATGAAGAAGGAGCCATTGAGACGAAGGTTGACACAATCGATCAGCGTTCACCGCCGGGGCAGAACCAGCTGGAGCCCAC
AAACGAACGCACCACGGTGGTTCATCTAACCAGAAAACAAGCCCATGGCAGCGGAGTTACGGGGAGTGCAGCCGCGGCTGTGGGTAACGCCCTTGGTTCGGCCAGGGATG
CCGTTTTTGGGAAGGGGAAAGACAGCCAACCACGGCGCTGA
mRNA sequenceShow/hide mRNA sequence
GTTTCTTCAGGATTTCGATCGAAATTTTGGTAAACCGCCGTTTGAATCTCGTGGGAAGAACCTACAGCCATGCACCAATCCCAGGGGTCGGAGAAGCTAAATGAAGAAGG
AGCCATTGAGACGAAGGTTGACACAATCGATCAGCGTTCACCGCCGGGGCAGAACCAGCTGGAGCCCACAAACGAACGCACCACGGTGGTTCATCTAACCAGAAAACAAG
CCCATGGCAGCGGAGTTACGGGGAGTGCAGCCGCGGCTGTGGGTAACGCCCTTGGTTCGGCCAGGGATGCCGTTTTTGGGAAGGGGAAAGACAGCCAACCACGGCGCTGA
GTGAAATTGAAGCTCTATAAATTATGTGACATGGAACCTTGGGGTTGGGGGGATATATTCATTGTCTATCTTCTCGTTTTGCCACTGCTCTGCTGCCGTTTTAGAATCCT
GTTGAATTTCCCTCTCCCACCAAAGTTGCCTTGGTTGTATTTGTTTGTTGCCTAATGAAGTTCTATTTCAAAAAATAAATAAATAAAATAAAATAAAATTCCACCACAAA
GTATATTAGTGAAAGATGTAGATCTCAATTTGTAAGACTAAATTTATGTTAAATGGCGACATAATCATAATAAATGCTCCGTCTCTGAAGTTCGTTCT
Protein sequenceShow/hide protein sequence
MHQSQGSEKLNEEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQAHGSGVTGSAAAAVGNALGSARDAVFGKGKDSQPRR