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Clc08G16840 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G16840
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:27251210..27251755
RNA-Seq ExpressionClc08G16840
SyntenyClc08G16840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060932.1 hypothetical protein E6C27_scaffold501G00650 [Cucumis melo var. makuwa]1.4e-1162Show/hide
Query:  MRFF-KSPPAGAG----GTII-ILTAVAFVALLLISSAEINNINGEDNDNINVVKLNKE---ATP--YQKL-HRTMR-PFHVLQSSKRKVPNASDPLHNR
        MRF  KSP AGAG    G II ILTAV F+ LLL+ S+    ++     N+NVVKL KE   ATP   QKL HR MR PF+VLQSSKRKVPNASDPLHNR
Subjt:  MRFF-KSPPAGAG----GTII-ILTAVAFVALLLISSAEINNINGEDNDNINVVKLNKE---ATP--YQKL-HRTMR-PFHVLQSSKRKVPNASDPLHNR
KGN62473.1 hypothetical protein Csa_018580 [Cucumis sativus]9.7e-1056.57Show/hide
Query:  MRFF-KSPPAGAG----GTII-ILTAVAFVALLLISSAEINNINGEDNDNINVVKLNKE---ATP-YQKLH--RTMRPFHVLQSSKRKVPNASDPLHNR
        MRF  KSP AGAG    G +I +LT V F+ LLL+ S+     +     N+N VKL KE   ATP  QKLH  R  RP +VLQSSKRKVPNASDPLHNR
Subjt:  MRFF-KSPPAGAG----GTII-ILTAVAFVALLLISSAEINNINGEDNDNINVVKLNKE---ATP-YQKLH--RTMRPFHVLQSSKRKVPNASDPLHNR
TrEMBL top hitse value%identityAlignment
A0A0A0LL43 Uncharacterized protein4.7e-1056.57Show/hide
Query:  MRFF-KSPPAGAG----GTII-ILTAVAFVALLLISSAEINNINGEDNDNINVVKLNKE---ATP-YQKLH--RTMRPFHVLQSSKRKVPNASDPLHNR
        MRF  KSP AGAG    G +I +LT V F+ LLL+ S+     +     N+N VKL KE   ATP  QKLH  R  RP +VLQSSKRKVPNASDPLHNR
Subjt:  MRFF-KSPPAGAG----GTII-ILTAVAFVALLLISSAEINNINGEDNDNINVVKLNKE---ATP-YQKLH--RTMRPFHVLQSSKRKVPNASDPLHNR
A0A5A7UYF8 Uncharacterized protein6.6e-1262Show/hide
Query:  MRFF-KSPPAGAG----GTII-ILTAVAFVALLLISSAEINNINGEDNDNINVVKLNKE---ATP--YQKL-HRTMR-PFHVLQSSKRKVPNASDPLHNR
        MRF  KSP AGAG    G II ILTAV F+ LLL+ S+    ++     N+NVVKL KE   ATP   QKL HR MR PF+VLQSSKRKVPNASDPLHNR
Subjt:  MRFF-KSPPAGAG----GTII-ILTAVAFVALLLISSAEINNINGEDNDNINVVKLNKE---ATP--YQKL-HRTMR-PFHVLQSSKRKVPNASDPLHNR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTCTTCAAATCTCCTCCTGCAGGCGCCGGTGGTACAATAATAATATTAACGGCGGTGGCTTTTGTGGCGTTGCTGCTAATTTCTTCAGCTGAGATCAAT
AACATCAATGGAGAAGACAATGATAATATTAATGTTGTCAAGTTAAACAAAGAAGCAACCCCATATCAGAAACTCCACCGTACAATGAGGCCATTCCATGTTCTA
CAGTCAAGTAAGAGGAAGGTTCCAAATGCTTCAGATCCACTCCACAATCGTTGA
mRNA sequenceShow/hide mRNA sequence
CTTGAGTTGAGGTGAGGTAAGGTGACAGTAACTTAAAATCCGTCCAAATATTTTTATATATTATATATATAACCCCTTAGCCTTCACTCCTCTTCAATTTGTGGC
TTGATCTTCCTTAGGCCATCATTATCAAATTCCACTCTCTTCTTCCCTCGATGCGGTTCTTCAAATCTCCTCCTGCAGGCGCCGGTGGTACAATAATAATATTAA
CGGCGGTGGCTTTTGTGGCGTTGCTGCTAATTTCTTCAGCTGAGATCAATAACATCAATGGAGAAGACAATGATAATATTAATGTTGTCAAGTTAAACAAAGAAG
CAACCCCATATCAGAAACTCCACCGTACAATGAGGCCATTCCATGTTCTACAGTCAAGTAAGAGGAAGGTTCCAAATGCTTCAGATCCACTCCACAATCGTTGAG
TTCATTTCTTTCCCTTTTTCCCCTTTCTTTCTACTACATTATATGGTCATCGGTATATAAACAGATTTTATAAATATCAGATTAATTTTTCATACTTTTATTATG
TAACAGATTTTGCTTTTTTTT
Protein sequenceShow/hide protein sequence
MRFFKSPPAGAGGTIIILTAVAFVALLLISSAEINNINGEDNDNINVVKLNKEATPYQKLHRTMRPFHVLQSSKRKVPNASDPLHNR