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Clc08G17100 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G17100
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:27435333..27436092
RNA-Seq ExpressionClc08G17100
SyntenyClc08G17100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN62446.1 hypothetical protein Csa_018581 [Cucumis sativus]1.4e-4685Show/hide
Query:  MGDTSKKTSAYFWTFPSKEYKNSGSKRDFEMESHQRENSHSFPSLFLSILSLKQLILLHSSTSSAKHLRWFSSLRSESYATLTWAFPILFSLFVYDDIIS
        MG+ +KKTSAYFWTFPSKEYKNSGSKRDFEM++HQ ENSH +PSL LSI SLK+LILLHSS SSAKHLR FSSLRSES ATLTWAFP+LFS FVYDDIIS
Subjt:  MGDTSKKTSAYFWTFPSKEYKNSGSKRDFEMESHQRENSHSFPSLFLSILSLKQLILLHSSTSSAKHLRWFSSLRSESYATLTWAFPILFSLFVYDDIIS

Query:  AERSLVYVGMGFVPLPVGAE
        AERS VYVGM FVPLPVGAE
Subjt:  AERSLVYVGMGFVPLPVGAE
TrEMBL top hitse value%identityAlignment
A0A0A0LR42 Uncharacterized protein6.6e-4785Show/hide
Query:  MGDTSKKTSAYFWTFPSKEYKNSGSKRDFEMESHQRENSHSFPSLFLSILSLKQLILLHSSTSSAKHLRWFSSLRSESYATLTWAFPILFSLFVYDDIIS
        MG+ +KKTSAYFWTFPSKEYKNSGSKRDFEM++HQ ENSH +PSL LSI SLK+LILLHSS SSAKHLR FSSLRSES ATLTWAFP+LFS FVYDDIIS
Subjt:  MGDTSKKTSAYFWTFPSKEYKNSGSKRDFEMESHQRENSHSFPSLFLSILSLKQLILLHSSTSSAKHLRWFSSLRSESYATLTWAFPILFSLFVYDDIIS

Query:  AERSLVYVGMGFVPLPVGAE
        AERS VYVGM FVPLPVGAE
Subjt:  AERSLVYVGMGFVPLPVGAE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCACAGAATGATATCTATGAATGGTTCGAGTTCATTCATGAACGAACTCAAGCGATTCTGCAGAGTAATGGACTCAGAAACACAAATGTTGGGCAAAAAGGATA
CTGTAGTGTGGTATTTGAACTCTGGGATTCGATTTTCGAGTTAAAAGAACAAGACAATAAATGGAGGAAACAAGAAGATGAAATGGGCGACACGAGCAAGAAGACCAGTG
CATATTTTTGGACTTTTCCTTCAAAAGAATACAAAAACTCAGGATCCAAACGTGATTTTGAAATGGAAAGCCACCAACGTGAAAACTCCCACTCTTTCCCCAGTCTATTT
CTTTCGATTCTGAGCCTGAAGCAATTGATCCTTCTTCATTCAAGCACATCAAGTGCAAAGCATTTGAGATGGTTTTCGAGTTTGAGATCTGAATCATATGCTACCTTGAC
ATGGGCTTTTCCTATTCTTTTCTCTCTTTTTGTGTATGATGACATTATTAGTGCAGAAAGGTCCCTTGTCTATGTTGGAATGGGGTTTGTACCTCTACCTGTAGGCGCAG
AGTCGCAGATGCCTATGGATTCCCTCAGTTTACTCTCTCTCCATCCGTTTGAGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCACAGAATGATATCTATGAATGGTTCGAGTTCATTCATGAACGAACTCAAGCGATTCTGCAGAGTAATGGACTCAGAAACACAAATGTTGGGCAAAAAGGATA
CTGTAGTGTGGTATTTGAACTCTGGGATTCGATTTTCGAGTTAAAAGAACAAGACAATAAATGGAGGAAACAAGAAGATGAAATGGGCGACACGAGCAAGAAGACCAGTG
CATATTTTTGGACTTTTCCTTCAAAAGAATACAAAAACTCAGGATCCAAACGTGATTTTGAAATGGAAAGCCACCAACGTGAAAACTCCCACTCTTTCCCCAGTCTATTT
CTTTCGATTCTGAGCCTGAAGCAATTGATCCTTCTTCATTCAAGCACATCAAGTGCAAAGCATTTGAGATGGTTTTCGAGTTTGAGATCTGAATCATATGCTACCTTGAC
ATGGGCTTTTCCTATTCTTTTCTCTCTTTTTGTGTATGATGACATTATTAGTGCAGAAAGGTCCCTTGTCTATGTTGGAATGGGGTTTGTACCTCTACCTGTAGGCGCAG
AGTCGCAGATGCCTATGGATTCCCTCAGTTTACTCTCTCTCCATCCGTTTGAGGTTTGA
Protein sequenceShow/hide protein sequence
MKSQNDIYEWFEFIHERTQAILQSNGLRNTNVGQKGYCSVVFELWDSIFELKEQDNKWRKQEDEMGDTSKKTSAYFWTFPSKEYKNSGSKRDFEMESHQRENSHSFPSLF
LSILSLKQLILLHSSTSSAKHLRWFSSLRSESYATLTWAFPILFSLFVYDDIISAERSLVYVGMGFVPLPVGAESQMPMDSLSLLSLHPFEV