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Clc08G17190 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G17190
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein SOB FIVE-LIKE 6-like
Genome locationClcChr08:27480987..27482960
RNA-Seq ExpressionClc08G17190
SyntenyClc08G17190
Gene Ontology termsGO:0009691 - cytokinin biosynthetic process (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
InterPro domainsIPR044670 - SOB-five-Like (SOFL) family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142900.1 uncharacterized protein LOC101210927 [Cucumis sativus]2.9e-5978.66Show/hide
Query:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGGGEK-EEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRNQHS
        MSNF+GS C+NSG ESGWTMYFE+SIETE RFRG  VDYGGGEK EEEE DLSMISDASSGPRNGYYEE NCQSV RSGGK  AGKSKR++EMG RNQHS
Subjt:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGGGEK-EEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRNQHS

Query:  CLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSKNWAR
        CLDDTASSPVFGLSKIRETNPYRNEGL +NVKEFSQTHSRK HGK    + +FF     K  A+
Subjt:  CLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSKNWAR

XP_022997597.1 uncharacterized protein LOC111492483 [Cucurbita maxima]2.7e-5775.45Show/hide
Query:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGG----GEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRN
        MS+FSGS CNN+  ESGWTMY E+S ETEGRFR   VDYGG     E+EEEEGDLSMISDASSGPR+GY EE NCQSVRR+GGK+AA KSKRK++MGRRN
Subjt:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGG----GEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRN

Query:  QHSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSKNWAR
        +HSCLDDTASSPVFGLSK RETNPYRNEGLVENVKEFSQTHSRKQHGK KP    FF    +K   +
Subjt:  QHSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSKNWAR

XP_023546846.1 uncharacterized protein LOC111805836 [Cucurbita pepo subsp. pepo]3.6e-5777.99Show/hide
Query:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGGGEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRNQHSC
        MS+FSGS CNN+  ESGWTMY E+S +TEGRFR   VDYGG  KEEEEGDLSMISDASSGPR+GY EE NCQSV R+ GK+AA KSKRK+EMGRRN+HSC
Subjt:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGGGEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRNQHSC

Query:  LDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSK
        LDDTASSPVFGLSK RETNPYRNEGLVENVKEFSQTHSRKQHGK KP   +FF    +K
Subjt:  LDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSK

XP_038886133.1 uncharacterized protein LOC120076391 isoform X1 [Benincasa hispida]2.4e-6187.59Show/hide
Query:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGGGEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRNQHSC
        MSNFSGS CNNSG ESGWTMYFE+SIETEG FR   VDYGGG KEEEEGDLSMISDASSGP NGYYEENN Q VRR+GGKSAAGKSKRK+EMGRRNQHSC
Subjt:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGGGEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRNQHSC

Query:  LDDTASSPVFGLSKIRETNPYRNEGLVENVKEFS-QTHSRKQHGK
        LDDTASSPVFGLS +RE +PYRNEGLVENVKEFS QTHSRKQHGK
Subjt:  LDDTASSPVFGLSKIRETNPYRNEGLVENVKEFS-QTHSRKQHGK

XP_038886134.1 uncharacterized protein LOC120076391 isoform X2 [Benincasa hispida]2.4e-6187.59Show/hide
Query:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGGGEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRNQHSC
        MSNFSGS CNNSG ESGWTMYFE+SIETEG FR   VDYGGG KEEEEGDLSMISDASSGP NGYYEENN Q VRR+GGKSAAGKSKRK+EMGRRNQHSC
Subjt:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGGGEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRNQHSC

Query:  LDDTASSPVFGLSKIRETNPYRNEGLVENVKEFS-QTHSRKQHGK
        LDDTASSPVFGLS +RE +PYRNEGLVENVKEFS QTHSRKQHGK
Subjt:  LDDTASSPVFGLSKIRETNPYRNEGLVENVKEFS-QTHSRKQHGK

TrEMBL top hitse value%identityAlignment
A0A0A0LR31 Uncharacterized protein1.4e-5978.66Show/hide
Query:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGGGEK-EEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRNQHS
        MSNF+GS C+NSG ESGWTMYFE+SIETE RFRG  VDYGGGEK EEEE DLSMISDASSGPRNGYYEE NCQSV RSGGK  AGKSKR++EMG RNQHS
Subjt:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGGGEK-EEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRNQHS

Query:  CLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSKNWAR
        CLDDTASSPVFGLSKIRETNPYRNEGL +NVKEFSQTHSRK HGK    + +FF     K  A+
Subjt:  CLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSKNWAR

A0A1S3BBA3 uncharacterized protein LOC1034878255.5e-5675.61Show/hide
Query:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGGGEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRNQHSC
        MSNF+GS  +NSG ESGWTMYFE+SIE E RFRG  VDYGGGEKEEEEGDLSMISDASSGPRNGYYEE +C SV RSGGK  AGKSKR++EMG RNQHSC
Subjt:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGGGEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRNQHSC

Query:  LDDTASSPVFGLSKIRET-NPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSKNWAR
        LDDTASSPV GLSKIRET NPYRNEGL +N KEFSQTHSRK HGK    + +FF     K  A+
Subjt:  LDDTASSPVFGLSKIRET-NPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSKNWAR

A0A6J1BR82 uncharacterized protein LOC111005036 isoform X28.6e-4164.12Show/hide
Query:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGGGEKEEEEGDLSMISDASSGPRNGY------YEENNCQSV-RRSGGKSAAGKSKRKQEMG
        MSNFSG+ C NSG +SGWT+YF+DS E   RFR  V DYGGG   EEEGDLSM+SDASSGPRNG+      +EE N Q V RR+GGKSAA K+KR+ E+G
Subjt:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGGGEKEEEEGDLSMISDASSGPRNGY------YEENNCQSV-RRSGGKSAAGKSKRKQEMG

Query:  RRNQHSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSKNWAR
        RRNQHS LDDTA+SPVF LSK RETNPY NE LVENVKEF+ +HSRKQ GK      +FF    +K   R
Subjt:  RRNQHSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSKNWAR

A0A6J1HFC4 uncharacterized protein LOC1114629202.9e-5777.78Show/hide
Query:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGG---GEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRNQ
        MS+FSGS CNN+  ESGWTMY E+S ETEGRFR G VDYGG    E+EEEEGDLSMISDASSGPR+GY EE NCQSV R+ GK+AA KSKRK+EMGRRN+
Subjt:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGG---GEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRNQ

Query:  HSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSK
        HSCLDDTASSPVFGLSK RETNPYRNEGLVENVKEFSQTHSRKQHGK KP   +FF    +K
Subjt:  HSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSK

A0A6J1K5J3 uncharacterized protein LOC1114924831.3e-5775.45Show/hide
Query:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGG----GEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRN
        MS+FSGS CNN+  ESGWTMY E+S ETEGRFR   VDYGG     E+EEEEGDLSMISDASSGPR+GY EE NCQSVRR+GGK+AA KSKRK++MGRRN
Subjt:  MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGG----GEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRN

Query:  QHSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSKNWAR
        +HSCLDDTASSPVFGLSK RETNPYRNEGLVENVKEFSQTHSRKQHGK KP    FF    +K   +
Subjt:  QHSCLDDTASSPVFGLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSKNWAR

SwissProt top hitse value%identityAlignment
Q8L9K4 Protein SOB FIVE-LIKE 52.9e-0936.31Show/hide
Query:  NNSGDESGWTMYFEDSIETEG----RFRGGV-----------VDYGGGEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGR
        ++SG ESGWT+Y + S+ +      R   G             +Y   E+EEEE DLSMISDASSGPRN   EE++ + +   G K    + K++++  +
Subjt:  NNSGDESGWTMYFEDSIETEG----RFRGGV-----------VDYGGGEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGR

Query:  RNQHSCLDDTASSPVF----------GLSKIRETNPYRNEGLVENVKEFSQTHSRKQ
         N  S LDDTASSP+F          G +KI +T P       E+  ++SQ  S  Q
Subjt:  RNQHSCLDDTASSPVF----------GLSKIRETNPYRNEGLVENVKEFSQTHSRKQ

Arabidopsis top hitse value%identityAlignment
AT4G33800.1 unknown protein2.0e-1036.31Show/hide
Query:  NNSGDESGWTMYFEDSIETEG----RFRGGV-----------VDYGGGEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGR
        ++SG ESGWT+Y + S+ +      R   G             +Y   E+EEEE DLSMISDASSGPRN   EE++ + +   G K    + K++++  +
Subjt:  NNSGDESGWTMYFEDSIETEG----RFRGGV-----------VDYGGGEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGR

Query:  RNQHSCLDDTASSPVF----------GLSKIRETNPYRNEGLVENVKEFSQTHSRKQ
         N  S LDDTASSP+F          G +KI +T P       E+  ++SQ  S  Q
Subjt:  RNQHSCLDDTASSPVF----------GLSKIRETNPYRNEGLVENVKEFSQTHSRKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAATTTTTCGGGTTCTCGTTGTAATAATAGTGGTGATGAATCGGGGTGGACAATGTATTTTGAGGATTCGATTGAGACGGAGGGGAGATTTCGGGGGGGTGTGGT
GGATTACGGCGGCGGAGAGAAGGAGGAAGAAGAAGGGGATTTGTCGATGATTTCGGATGCGTCGTCGGGGCCGAGGAATGGGTATTATGAGGAGAATAATTGTCAGTCAG
TGCGGCGGAGTGGGGGGAAATCGGCGGCGGGGAAAAGTAAAAGGAAACAGGAGATGGGGCGGCGGAACCAACATTCTTGCCTTGATGATACTGCAAGCTCCCCTGTTTTT
GGGCTTTCCAAGATCAGAGAGACGAATCCATACAGAAATGAAGGTTTGGTGGAGAATGTAAAAGAATTCTCCCAAACCCATTCTCGAAAACAACATGGGAAGGTAAAACC
AAACAAACAAGCTTTTTTCAGTCTTCCTCAGTCAAAAAATTGGGCAAGAATGTCTCAGGTAAAAAGCTCTCACCCGGCACCACCGACGATTATAAAGAACAGTAGAAGGG
AGAACGGCGAGAATAATTAA
mRNA sequenceShow/hide mRNA sequence
GATGAGTAATTTTTCGGGTTCTCGTTGTAATAATAGTGGTGATGAATCGGGGTGGACAATGTATTTTGAGGATTCGATTGAGACGGAGGGGAGATTTCGGGGGGGTGTGG
TGGATTACGGCGGCGGAGAGAAGGAGGAAGAAGAAGGGGATTTGTCGATGATTTCGGATGCGTCGTCGGGGCCGAGGAATGGGTATTATGAGGAGAATAATTGTCAGTCA
GTGCGGCGGAGTGGGGGGAAATCGGCGGCGGGGAAAAGTAAAAGGAAACAGGAGATGGGGCGGCGGAACCAACATTCTTGCCTTGATGATACTGCAAGCTCCCCTGTTTT
TGGGCTTTCCAAGATCAGAGAGACGAATCCATACAGAAATGAAGGTTTGGTGGAGAATGTAAAAGAATTCTCCCAAACCCATTCTCGAAAACAACATGGGAAGGTAAAAC
CAAACAAACAAGCTTTTTTCAGTCTTCCTCAGTCAAAAAATTGGGCAAGAATGTCTCAGGTAAAAAGCTCTCACCCGGCACCACCGACGATTATAAAGAACAGTAGAAGG
GAGAACGGCGAGAATAATTAAATGAAATGATAGAGACACGAG
Protein sequenceShow/hide protein sequence
MSNFSGSRCNNSGDESGWTMYFEDSIETEGRFRGGVVDYGGGEKEEEEGDLSMISDASSGPRNGYYEENNCQSVRRSGGKSAAGKSKRKQEMGRRNQHSCLDDTASSPVF
GLSKIRETNPYRNEGLVENVKEFSQTHSRKQHGKVKPNKQAFFSLPQSKNWARMSQVKSSHPAPPTIIKNSRRENGENN