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Clc08G17210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G17210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionFKBP-type peptidyl-prolyl cis-trans isomerase family protein
Genome locationClcChr08:27511623..27512072
RNA-Seq ExpressionClc08G17210
SyntenyClc08G17210
Gene Ontology termsNA
InterPro domainsIPR016972 - Uncharacterised conserved protein UCP031279


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060962.1 uncharacterized protein E6C27_scaffold501G00970 [Cucumis melo var. makuwa]1.1e-6491.97Show/hide
Query:  IRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQSKGLPKSCSVGMG
        +RFV LPIRALGKAKDFYV+SIMDCAPRVSHGYPSGQLP+LPKSYSSRS RSNETDDFRELVKAASV+SLDIK+IDADILYP+RLRQSKGLPKSCSVGMG
Subjt:  IRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQSKGLPKSCSVGMG

Query:  RIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF
        RIDEDTACEFE+ VEDKADLVYPRSKSYAVTNSK GF
Subjt:  RIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF

XP_008444532.1 PREDICTED: uncharacterized protein LOC103487823 [Cucumis melo]7.6e-7191.28Show/hide
Query:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS
        MRTK+AQNQ+KF+RFV LPIRALGKAKDFYV+SIMDCAPRVSHGYPSGQLP+LPKSYSSRS RSNETDDFRELVKAASV+SLDIK+IDADILYP+RLRQS
Subjt:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS

Query:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF
        KGLPKSCSVGMGRIDEDTACEFE+ VEDKADLVYPRSKSYAVTNSK GF
Subjt:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF

XP_011649558.1 uncharacterized protein LOC105434639 [Cucumis sativus]7.1e-6989.26Show/hide
Query:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS
        M+TK AQNQ+KFIRFV LPIRALGKAKDFYV+SIMDCAPRVSHGYPSGQLP+LPKSYSSRS RSNETDDFRELVKAASV+SLDIK+IDADILYP+R RQS
Subjt:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS

Query:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF
        KGLPKSCSVGMGRIDEDTACEFE+GVEDKA L YPRSKSYAVTNS  GF
Subjt:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF

XP_023002833.1 uncharacterized protein LOC111496579 [Cucurbita maxima]2.6e-6382.43Show/hide
Query:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS
        M TK A N+SKF+RFV LPIRALGKAKD YVRSIMDCAPRVSHGYPSGQ+P+LPKSYSSRS RSNETDDFRELVKAASV+S+DIK++DAD++YP+R+RQS
Subjt:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS

Query:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPG
         GLPKSCSVGMGRIDED+ACEFEDGVE+K DLVYPRS+SYAVT++K G
Subjt:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPG

XP_038884662.1 uncharacterized protein LOC120075388 [Benincasa hispida]2.1e-7394.63Show/hide
Query:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS
        MRTK AQNQSKFIRFV LPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLP+LPKSYSSRS RSNETDDFRELVKAASV+SLDIK+IDADILYP+RL+QS
Subjt:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS

Query:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF
        KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF
Subjt:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF

TrEMBL top hitse value%identityAlignment
A0A0A0LN74 Uncharacterized protein3.4e-6989.26Show/hide
Query:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS
        M+TK AQNQ+KFIRFV LPIRALGKAKDFYV+SIMDCAPRVSHGYPSGQLP+LPKSYSSRS RSNETDDFRELVKAASV+SLDIK+IDADILYP+R RQS
Subjt:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS

Query:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF
        KGLPKSCSVGMGRIDEDTACEFE+GVEDKA L YPRSKSYAVTNS  GF
Subjt:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF

A0A1S3BAI0 uncharacterized protein LOC1034878233.7e-7191.28Show/hide
Query:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS
        MRTK+AQNQ+KF+RFV LPIRALGKAKDFYV+SIMDCAPRVSHGYPSGQLP+LPKSYSSRS RSNETDDFRELVKAASV+SLDIK+IDADILYP+RLRQS
Subjt:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS

Query:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF
        KGLPKSCSVGMGRIDEDTACEFE+ VEDKADLVYPRSKSYAVTNSK GF
Subjt:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF

A0A5A7UYI9 Uncharacterized protein5.1e-6591.97Show/hide
Query:  IRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQSKGLPKSCSVGMG
        +RFV LPIRALGKAKDFYV+SIMDCAPRVSHGYPSGQLP+LPKSYSSRS RSNETDDFRELVKAASV+SLDIK+IDADILYP+RLRQSKGLPKSCSVGMG
Subjt:  IRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQSKGLPKSCSVGMG

Query:  RIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF
        RIDEDTACEFE+ VEDKADLVYPRSKSYAVTNSK GF
Subjt:  RIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF

A0A6J1GH58 uncharacterized protein LOC1114541531.1e-6281.76Show/hide
Query:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS
        M TK A N+SKF+RFV LPIRALGKAKD YVRSIMDCAPRVSHGYPSGQ+P+LPKSYSSRS RSNETDDFRELVKAASV+S+DIK++DAD++YP+R+RQS
Subjt:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS

Query:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPG
         GLPKSCSVGMGRIDED+ACEFE GVE+K DLVYPRS+SYAVT++K G
Subjt:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPG

A0A6J1KUQ7 uncharacterized protein LOC1114965791.3e-6382.43Show/hide
Query:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS
        M TK A N+SKF+RFV LPIRALGKAKD YVRSIMDCAPRVSHGYPSGQ+P+LPKSYSSRS RSNETDDFRELVKAASV+S+DIK++DAD++YP+R+RQS
Subjt:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQS

Query:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPG
         GLPKSCSVGMGRIDED+ACEFEDGVE+K DLVYPRS+SYAVT++K G
Subjt:  KGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10140.1 Uncharacterised conserved protein UCP0312794.2e-2746.67Show/hide
Query:  QNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKS-------YSSRSSRSNETD-----DFRELVKAASVKSLDIKNIDADILYP
        QNQSKF+R +  P+RALGKA+DFYVRSI  CA R  +   +      P+S       +SS +S    TD     D+ ELV+AASV+SL  KN + D+L  
Subjt:  QNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKS-------YSSRSSRSNETD-----DFRELVKAASVKSLDIKNIDADILYP

Query:  RRLRQSK-----GLPKSCSVGMGRIDEDTACEFEDGVEDK-------ADLVYPRSKSYAVTNSKP
         +L+Q K     GLPKS S GM RI+E+   E E  V  K       +DL+YPRSKSYAVT S P
Subjt:  RRLRQSK-----GLPKSCSVGMGRIDEDTACEFEDGVEDK-------ADLVYPRSKSYAVTNSKP

AT1G58420.1 Uncharacterised conserved protein UCP0312793.0e-1737.93Show/hide
Query:  KEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRV--SHGYPSGQLPMLPKSYSSRSSRSNET------------DDFRELVKAASVKSLDIKN-ID
        K  Q Q++F+R V +P++ L KA+D Y+RSI  CA R   S    +  +P  P+S S+ S+ S+              DD+ EL++AASV+SL  KN ID
Subjt:  KEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRV--SHGYPSGQLPMLPKSYSSRSSRSNET------------DDFRELVKAASVKSLDIKN-ID

Query:  ADILYPRRLRQSK--------------GLPKSCSVG--MGRIDEDTACEFEDGVEDK---ADLVYPRSKSYAVT
          I   ++ +Q +              GLPKS SVG  M RIDE+   E E  V+++   +D +YPRS+S+AVT
Subjt:  ADILYPRRLRQSK--------------GLPKSCSVG--MGRIDEDTACEFEDGVEDK---ADLVYPRSKSYAVT

AT3G49820.1 unknown protein1.3e-0426.15Show/hide
Query:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCA-PRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQ
        M+ K  + ++ F+  VK P R L  A+D Y+RSI  C+   +  G  S     L  ++      S        L  AA  +    +     I   + L  
Subjt:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCA-PRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQ

Query:  SKGLPKSCSVGMGRIDEDTACEFEDGVEDK
               C V MGRIDE+ +C+ +D  +++
Subjt:  SKGLPKSCSVGMGRIDEDTACEFEDGVEDK

AT4G37700.1 unknown protein5.7e-0831.29Show/hide
Query:  QNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPR------VSHGYPSGQLPMLPKSYSSRSSRSN---ETDDFRELVKAASVKSLDIKNIDADILYPRRL
        + ++K  +++K+PI+ L KA+D Y+RS+   +        +S G P   +  LP+S+S+  S+ +   E D   +LV+AAS ++     ID     P +L
Subjt:  QNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPR------VSHGYPSGQLPMLPKSYSSRSSRSN---ETDDFRELVKAASVKSLDIKNIDADILYPRRL

Query:  RQSKGLPKSCS--VGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAV
        R++K   +SC    G  +IDE +      G + K   ++ RSKSY+V
Subjt:  RQSKGLPKSCS--VGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAV

AT5G65925.1 unknown protein1.0e-0427.46Show/hide
Query:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRV--------SHGYPSGQL-------PMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIK
        M+ KE + +S   R VK P+R L  A+D Y+RS+  C+           + G P G          +LP+S++  S+ +   +  R + + AS   + ++
Subjt:  MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRV--------SHGYPSGQL-------PMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIK

Query:  NIDADILYPRRLRQSKGLPK--SCSVGMGRIDEDTAC-EFED
                   +++   L +  SC V MGRIDE+  C +FE+
Subjt:  NIDADILYPRRLRQSKGLPK--SCSVGMGRIDEDTAC-EFED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACCAAAGAAGCGCAAAATCAAAGCAAATTCATCCGATTCGTTAAACTACCCATCAGAGCTCTAGGCAAGGCCAAGGATTTCTATGTACGAAGCATCATGGATTG
TGCTCCCAGAGTCTCTCACGGCTACCCATCTGGCCAATTGCCCATGTTGCCCAAAAGCTACAGCTCTCGCTCTTCCAGATCCAATGAAACCGACGATTTCAGAGAGCTTG
TCAAGGCCGCTTCCGTTAAAAGCTTGGACATTAAAAATATCGACGCCGATATTCTTTATCCACGGAGGCTAAGACAGTCCAAGGGACTTCCTAAAAGTTGCAGTGTTGGA
ATGGGTAGGATTGATGAGGATACTGCTTGTGAATTTGAAGATGGCGTTGAAGATAAGGCTGATTTGGTTTATCCAAGAAGTAAAAGCTACGCTGTGACAAATTCAAAACC
TGGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAACCAAAGAAGCGCAAAATCAAAGCAAATTCATCCGATTCGTTAAACTACCCATCAGAGCTCTAGGCAAGGCCAAGGATTTCTATGTACGAAGCATCATGGATTG
TGCTCCCAGAGTCTCTCACGGCTACCCATCTGGCCAATTGCCCATGTTGCCCAAAAGCTACAGCTCTCGCTCTTCCAGATCCAATGAAACCGACGATTTCAGAGAGCTTG
TCAAGGCCGCTTCCGTTAAAAGCTTGGACATTAAAAATATCGACGCCGATATTCTTTATCCACGGAGGCTAAGACAGTCCAAGGGACTTCCTAAAAGTTGCAGTGTTGGA
ATGGGTAGGATTGATGAGGATACTGCTTGTGAATTTGAAGATGGCGTTGAAGATAAGGCTGATTTGGTTTATCCAAGAAGTAAAAGCTACGCTGTGACAAATTCAAAACC
TGGGTTTTGA
Protein sequenceShow/hide protein sequence
MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKNIDADILYPRRLRQSKGLPKSCSVG
MGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF