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Clc08G17670 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G17670
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionGlutaredoxin
Genome locationClcChr08:27936500..27939948
RNA-Seq ExpressionClc08G17670
SyntenyClc08G17670
Gene Ontology termsGO:0097573 - glutathione oxidoreductase activity (molecular function)
InterPro domainsIPR002109 - Glutaredoxin
IPR011905 - Glutaredoxin-like, plant II
IPR014025 - Glutaredoxin subgroup
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142929.1 glutaredoxin-C6 [Cucumis sativus]1.5e-6294.12Show/hide
Query:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        MHR  ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI +HPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC
        GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC

XP_008444458.1 PREDICTED: glutaredoxin-C6-like isoform X2 [Cucumis melo]5.9e-6294.12Show/hide
Query:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        M R  ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI EHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC
        GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC

XP_022997508.1 glutaredoxin-C6-like [Cucurbita maxima]2.9e-6193.38Show/hide
Query:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        M+ CANDVVSSE PPSPTSSSSLSIDVDESSE RIRRLI EHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIEL+DHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC
        GASFGGLE+LVALHLSGHLVPKLIEVGAL VGHVQC
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC

XP_023546567.1 glutaredoxin-C6-like [Cucurbita pepo subsp. pepo]2.9e-6193.38Show/hide
Query:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        M+ CANDVVSSE PPSPTSSSSLSIDVDESSE RIRRLI EHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIEL+DHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC
        GASFGGLE+LVALHLSGHLVPKLIEVGAL VGHVQC
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC

XP_038885533.1 glutaredoxin-C6-like isoform X1 [Benincasa hispida]2.0e-6597.06Show/hide
Query:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        MHRC NDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSR+SCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC
        GASFGGLESLVALHLSGHL+PKLIEVGALPVGHVQC
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC

TrEMBL top hitse value%identityAlignment
A0A0A0LN11 Glutaredoxin7.5e-6394.12Show/hide
Query:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        MHR  ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI +HPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC
        GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC

A0A1S3BAG0 glutaredoxin-C6-like isoform X22.8e-6294.12Show/hide
Query:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        M R  ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI EHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC
        GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC

A0A5A7UYF1 Glutaredoxin-C6-like isoform X21.9e-5893.89Show/hide
Query:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        M R  ND VS EFPPSPTSSSSLSIDVDESSETRIRRLI EHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIE+DDHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPV
        GASFGGLESLVALHLSGHLVPKLIEVGALPV
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPV

A0A6J1HEU7 glutaredoxin-C6-like1.8e-6193.38Show/hide
Query:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        M+ CANDVVSSE PPSPTSSSSLSIDVDESSE RIRRLI EHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIEL+DHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC
        GASFGGLE+LVALHLSGHLVPKLIEVGAL VGHVQC
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC

A0A6J1KE42 glutaredoxin-C6-like1.4e-6193.38Show/hide
Query:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG
        M+ CANDVVSSE PPSPTSSSSLSIDVDESSE RIRRLI EHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIEL+DHDEIAAVPSSSF RDSSAPAVFIG
Subjt:  MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIG

Query:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC
        GASFGGLE+LVALHLSGHLVPKLIEVGAL VGHVQC
Subjt:  GASFGGLESLVALHLSGHLVPKLIEVGALPVGHVQC

SwissProt top hitse value%identityAlignment
Q0DK35 Glutaredoxin-C73.6e-2256.44Show/hide
Query:  ESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGA
        E    RI RL+ E PV+IF+R  C MCHVM+ LLA +G H TVIELD+  E AA   +S A  ++ PA+F+GGA  GGL+ L+ LHLSG LVP+L EVGA
Subjt:  ESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGA

Query:  L
        L
Subjt:  L

Q29PZ1 Glutaredoxin-C106.2e-3053.06Show/hide
Query:  MHRCANDVVSSEF-----------PPSP------TSSSSLSIDVDESSETRIRRLIAEHPVIIFSR-SSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAA
        +  C+ND V+ +            PP+P      T+S+SLS D +E+SE++I RLI+EHPVIIF+R SSC MCHVMK LL+ +GVHPTVIE+DD  EIA 
Subjt:  MHRCANDVVSSEF-----------PPSP------TSSSSLSIDVDESSETRIRRLIAEHPVIIFSR-SSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAA

Query:  VPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL
             +    +AP +FIGG   GG ESLVALHLSG L+P+L+EVGAL
Subjt:  VPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL

Q5SMY5 Monothiol glutaredoxin-S21.9e-1847.75Show/hide
Query:  SLSID---VDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGH
        SL+ID    +E+   R+ RL+ E PV++F+R  C M HVM+ LLA +G H TVIEL+     A    ++    ++ PA+F+GG   GGLE L+ LHLSG 
Subjt:  SLSID---VDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGH

Query:  LVPKLIEVGAL
        LVP+L EVGAL
Subjt:  LVPKLIEVGAL

Q7G8Y5 Glutaredoxin-C11.5e-1545.45Show/hide
Query:  RIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDH---DEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL
        R+ RL A+  V+IFS SSC MCH +  L   +GV+PTV+ELD+     E+    +    R  + PAVFIGG   G  + +++LHLSG+LVP L   GAL
Subjt:  RIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDH---DEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL

Q8L9S3 Glutaredoxin-C61.3e-3564.23Show/hide
Query:  MHRCANDVVSSEF-PPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVP-------SSSFARDS
        + R +NDVV  +  PPS TSS+SLSID +ES+E +IRRLI+EHPVIIFSRSSC MCHVMK LLA IGV PTVIELDDH E++++P       S   +   
Subjt:  MHRCANDVVSSEF-PPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVP-------SSSFARDS

Query:  SAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL
          PAVFIG    GGLESLVALHLSG LVPKL++VGAL
Subjt:  SAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL

Arabidopsis top hitse value%identityAlignment
AT1G28480.1 Thioredoxin superfamily protein1.5e-1539.82Show/hide
Query:  LSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDH------DEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLS
        LS+    + E R+R ++ E+ VI+  R  C MCHV++ LL  +GV+P V+E+D+        E+  +           PAV++GG  FGGL+ ++A H+S
Subjt:  LSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDH------DEIAAVPSSSFARDSSAPAVFIGGASFGGLESLVALHLS

Query:  GHLVPKLIEVGAL
        G LVP L EVGAL
Subjt:  GHLVPKLIEVGAL

AT4G15680.1 Thioredoxin superfamily protein1.4e-1339.8Show/hide
Query:  RIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPS--SSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL
        +++++I+E  V+IFS++SC M H +KTL    GV+PT+ ELD+ +    +    +      + P VFIGG   GG   +++LHL+  LVP L  VGAL
Subjt:  RIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPS--SSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL

AT4G33040.1 Thioredoxin superfamily protein9.1e-3764.23Show/hide
Query:  MHRCANDVVSSEF-PPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVP-------SSSFARDS
        + R +NDVV  +  PPS TSS+SLSID +ES+E +IRRLI+EHPVIIFSRSSC MCHVMK LLA IGV PTVIELDDH E++++P       S   +   
Subjt:  MHRCANDVVSSEF-PPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVP-------SSSFARDS

Query:  SAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL
          PAVFIG    GGLESLVALHLSG LVPKL++VGAL
Subjt:  SAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL

AT5G11930.1 Thioredoxin superfamily protein4.4e-3153.06Show/hide
Query:  MHRCANDVVSSEF-----------PPSP------TSSSSLSIDVDESSETRIRRLIAEHPVIIFSR-SSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAA
        +  C+ND V+ +            PP+P      T+S+SLS D +E+SE++I RLI+EHPVIIF+R SSC MCHVMK LL+ +GVHPTVIE+DD  EIA 
Subjt:  MHRCANDVVSSEF-----------PPSP------TSSSSLSIDVDESSETRIRRLIAEHPVIIFSR-SSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAA

Query:  VPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL
             +    +AP +FIGG   GG ESLVALHLSG L+P+L+EVGAL
Subjt:  VPSSSFARDSSAPAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL

AT5G18600.1 Thioredoxin superfamily protein6.4e-1441.24Show/hide
Query:  IRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSS--APAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL
        I +++ E PV+I+S+SSC M H +KTLL   G +P V ELD+      +  +      S   P VFIGG   GG   +++LHL+G L+P L   GAL
Subjt:  IRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSS--APAVFIGGASFGGLESLVALHLSGHLVPKLIEVGAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCGCTGCGCGAACGACGTCGTATCCTCGGAATTTCCTCCTTCTCCGACTTCCTCCTCCTCCCTATCCATCGACGTGGATGAATCGTCGGAAACTCGGATCCGGCG
GCTGATTGCAGAGCATCCGGTGATCATATTCAGCCGCTCCTCCTGCAGCATGTGCCACGTCATGAAGACTCTCCTCGCCATCATCGGAGTCCATCCCACCGTCATCGAAC
TTGACGATCACGACGAAATCGCCGCTGTTCCTTCTTCGTCTTTTGCTCGGGACAGTTCGGCGCCTGCGGTTTTCATCGGCGGCGCTAGCTTCGGCGGCTTGGAATCTCTT
GTTGCTCTCCATCTTAGCGGCCATCTCGTTCCTAAACTCATCGAAGTTGGAGCTCTCCCGGTGGGACACGTGCAGTGTTGA
mRNA sequenceShow/hide mRNA sequence
AAACACTAAAAAAAATTTGAAGACGTTTCTTTTTCTTTTTCTTTTTTATTGGGTCCAAAATACCGATTTGATACTAAAAATCAAATGACGTAAGCCACCACTTTCACTGC
AAATAATAATAATAATAATAATGGGAATTGTAATAATAATAAAATAAAAGATTTATATATAAAGAGCTTAAGAAATCCCTTGCCCCTTCGCAAATTTAACCATTCCCCTT
TCTCCTCCCGTCCCGACTCCCGCTGTCTCCCAATTGTCCGGCGATGCACCGCTGCGCGAACGACGTCGTATCCTCGGAATTTCCTCCTTCTCCGACTTCCTCCTCCTCCC
TATCCATCGACGTGGATGAATCGTCGGAAACTCGGATCCGGCGGCTGATTGCAGAGCATCCGGTGATCATATTCAGCCGCTCCTCCTGCAGCATGTGCCACGTCATGAAG
ACTCTCCTCGCCATCATCGGAGTCCATCCCACCGTCATCGAACTTGACGATCACGACGAAATCGCCGCTGTTCCTTCTTCGTCTTTTGCTCGGGACAGTTCGGCGCCTGC
GGTTTTCATCGGCGGCGCTAGCTTCGGCGGCTTGGAATCTCTTGTTGCTCTCCATCTTAGCGGCCATCTCGTTCCTAAACTCATCGAAGTTGGAGCTCTCCCGGTGGGAC
ACGTGCAGTGTTGAAAGTGGGAGATCAGGAGTGCTTGTCATGAGGTGCCACACAGAGGATTTCTGCCTCTTTCCTACTTTTGTGGGGTAGTTTTGTAATTATTGGCAAAG
TCTCTCGTCGCCACCGTAGAACATGTGGCCGTCGTCGTAGCCTAAACATCCTCTCATTGCCCAAAAACAATGAAGTCCCCCCCCCCC
Protein sequenceShow/hide protein sequence
MHRCANDVVSSEFPPSPTSSSSLSIDVDESSETRIRRLIAEHPVIIFSRSSCSMCHVMKTLLAIIGVHPTVIELDDHDEIAAVPSSSFARDSSAPAVFIGGASFGGLESL
VALHLSGHLVPKLIEVGALPVGHVQC