; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G17760 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G17760
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionF-box protein At1g67340-like
Genome locationClcChr08:27986040..27988219
RNA-Seq ExpressionClc08G17760
SyntenyClc08G17760
Gene Ontology termsGO:0005515 - protein binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002893 - Zinc finger, MYND-type
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR036047 - F-box-like domain superfamily
IPR044508 - F-box protein At5g50450/At1g67340-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143042.1 F-box protein At1g67340 [Cucumis sativus]4.6e-18790.46Show/hide
Query:  MRTPTPNSITMNNNTRFYSSNSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAH
        MRTPTP +ITMNNN         KRNRF  K DFFDSLPDDLLISILSKL SSASSPS FI ALITCKRFN+LGRHSLVLSKASQRTLGISAKNWSESAH
Subjt:  MRTPTPNSITMNNNTRFYSSNSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAH

Query:  RFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGV
        RFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIS +APALYSL+VIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV
Subjt:  RFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGV

Query:  CQNIMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGR
        CQNIMEGRRFLVQANARELAAVLSS ++AASRS VTCNPHA HRTAVGSSS+CPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGR
Subjt:  CQNIMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGR

Query:  PETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEED
        PETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLE+WPENDGD  E DGDG ILNEN+E+D
Subjt:  PETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEED

XP_008444448.1 PREDICTED: F-box protein At1g67340-like [Cucumis melo]2.1e-19291.4Show/hide
Query:  MRTPTPNSITMNNNTRFYSSNSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAH
        MRTP P +ITMNNN         KRNRF  KSDFFDSLPDDLLISILSKLASSASSPS FI ALITCKRFN+LGRHSLVLSKASQRTLGISAKNWSESAH
Subjt:  MRTPTPNSITMNNNTRFYSSNSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAH

Query:  RFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGV
        RFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIS HAPALYSL+VIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGV
Subjt:  RFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGV

Query:  CQNIMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGR
        CQNIMEGRRFLVQANARELAAVLSS ++AASRSWVTCNP A HRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGR
Subjt:  CQNIMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGR

Query:  PETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVIGES
        PETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLE+WPENDGD GE DG+G ILNEN++EDV+GES
Subjt:  PETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVIGES

XP_022951094.1 F-box protein At1g67340-like [Cucurbita moschata]1.2e-17681.09Show/hide
Query:  LFVTSFFLLRLTVS--GQAPMRTPTPNSITMNNNTRFYSSNSFKRNRFSSK------SDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLG
        L + S F LRLTVS    +PMRT      +  N    Y S S KR RFS        SDFF SLPDDLLISILSKL+++ASSPSDFI ALITCKRFNNLG
Subjt:  LFVTSFFLLRLTVS--GQAPMRTPTPNSITMNNNTRFYSSNSFKRNRFSSK------SDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLG

Query:  RHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVAL
        RHSLVL+KASQ+TL I AKNWSESAHRFLK CVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIS HAPALYSL+VIQFNGSGGSKNDKDLRAGVAL
Subjt:  RHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVAL

Query:  CARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSS----TAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHP
        CARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS+    T  A+RSWVTC+PH HHR AVGSS+ECPLLSDFGCNVPA EAHP
Subjt:  CARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSS----TAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHP

Query:  ASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVIG
        ASRFMAEWFA+RGG PGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+G+GG   G+G + NEN+ EDVI 
Subjt:  ASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVIG

Query:  ES
        ES
Subjt:  ES

XP_023002802.1 F-box protein At1g67340-like [Cucurbita maxima]2.1e-17981.59Show/hide
Query:  LFVTSFFLLRLTVS--GQAPMRTPTPNSITMNNNTRFYSSNSFKRNRFS------SKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLG
        L + S F LRLTVS    +PMRT      +  N    Y S S KR RFS      + SDFF SLPDDLLISILSKL+++ASSPSDFI ALITCKRFNNLG
Subjt:  LFVTSFFLLRLTVS--GQAPMRTPTPNSITMNNNTRFYSSNSFKRNRFS------SKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLG

Query:  RHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVAL
        RHSLVL+KASQ+TL I AKNWSESAHRFLK CVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIS HAPALYSL+VIQFNGSGGSKNDKDLRAGVAL
Subjt:  RHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVAL

Query:  CARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS----STAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHP
        CARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS    +T  A+RSWVTC+PH HHR AVGSS+ECPLLSDFGCNVPA EAHP
Subjt:  CARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS----STAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHP

Query:  ASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVIG
        ASRFMAEWFA+RGG PGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+G+GG  DGDG + NEN+ EDVI 
Subjt:  ASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVIG

Query:  ES
        ES
Subjt:  ES

XP_038885404.1 F-box protein At1g67340-like [Benincasa hispida]9.2e-19694.18Show/hide
Query:  MRT-PTPNSITMN-NNTRF--YSSNSFKRNR-FSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNW
        MRT  TPNSITMN  NT F   SS+SFKRNR FSSKSDFFDSLPDDLLISILSKLASSASSPSDFIK LITCKRFNNLGRHSLVLSKASQRTLGI+AKNW
Subjt:  MRT-PTPNSITMN-NNTRF--YSSNSFKRNR-FSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNW

Query:  SESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQ
        SESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIS HAPALYSL+VIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQ
Subjt:  SESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQ

Query:  DGYGVCQNIMEGRRFLVQANARELAAVLSSSTA-AASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCS
        DGYGVCQNIMEGRRFLVQANARELAAVLSSSTA A SRSWVTCNP AHHRTAVGSS+ECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCS
Subjt:  DGYGVCQNIMEGRRFLVQANARELAAVLSSSTA-AASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCS

Query:  HVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVIGES
        HVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLE+WPENDGDGGEA+GDG ILNEND+EDVIGES
Subjt:  HVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVIGES

TrEMBL top hitse value%identityAlignment
A0A0A0LMZ9 MYND-type domain-containing protein2.2e-18790.46Show/hide
Query:  MRTPTPNSITMNNNTRFYSSNSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAH
        MRTPTP +ITMNNN         KRNRF  K DFFDSLPDDLLISILSKL SSASSPS FI ALITCKRFN+LGRHSLVLSKASQRTLGISAKNWSESAH
Subjt:  MRTPTPNSITMNNNTRFYSSNSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAH

Query:  RFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGV
        RFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIS +APALYSL+VIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV
Subjt:  RFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGV

Query:  CQNIMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGR
        CQNIMEGRRFLVQANARELAAVLSS ++AASRS VTCNPHA HRTAVGSSS+CPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGR
Subjt:  CQNIMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGR

Query:  PETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEED
        PETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLE+WPENDGD  E DGDG ILNEN+E+D
Subjt:  PETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEED

A0A1S3BB38 F-box protein At1g67340-like1.0e-19291.4Show/hide
Query:  MRTPTPNSITMNNNTRFYSSNSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAH
        MRTP P +ITMNNN         KRNRF  KSDFFDSLPDDLLISILSKLASSASSPS FI ALITCKRFN+LGRHSLVLSKASQRTLGISAKNWSESAH
Subjt:  MRTPTPNSITMNNNTRFYSSNSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAH

Query:  RFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGV
        RFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIS HAPALYSL+VIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGV
Subjt:  RFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGV

Query:  CQNIMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGR
        CQNIMEGRRFLVQANARELAAVLSS ++AASRSWVTCNP A HRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGR
Subjt:  CQNIMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGR

Query:  PETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVIGES
        PETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLE+WPENDGD GE DG+G ILNEN++EDV+GES
Subjt:  PETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVIGES

A0A6J1GHQ9 F-box protein At1g67340-like6.0e-17781.09Show/hide
Query:  LFVTSFFLLRLTVS--GQAPMRTPTPNSITMNNNTRFYSSNSFKRNRFSSK------SDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLG
        L + S F LRLTVS    +PMRT      +  N    Y S S KR RFS        SDFF SLPDDLLISILSKL+++ASSPSDFI ALITCKRFNNLG
Subjt:  LFVTSFFLLRLTVS--GQAPMRTPTPNSITMNNNTRFYSSNSFKRNRFSSK------SDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLG

Query:  RHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVAL
        RHSLVL+KASQ+TL I AKNWSESAHRFLK CVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIS HAPALYSL+VIQFNGSGGSKNDKDLRAGVAL
Subjt:  RHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVAL

Query:  CARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSS----TAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHP
        CARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS+    T  A+RSWVTC+PH HHR AVGSS+ECPLLSDFGCNVPA EAHP
Subjt:  CARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSS----TAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHP

Query:  ASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVIG
        ASRFMAEWFA+RGG PGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+G+GG   G+G + NEN+ EDVI 
Subjt:  ASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVIG

Query:  ES
        ES
Subjt:  ES

A0A6J1KKI0 F-box protein At1g67340-like9.9e-18081.59Show/hide
Query:  LFVTSFFLLRLTVS--GQAPMRTPTPNSITMNNNTRFYSSNSFKRNRFS------SKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLG
        L + S F LRLTVS    +PMRT      +  N    Y S S KR RFS      + SDFF SLPDDLLISILSKL+++ASSPSDFI ALITCKRFNNLG
Subjt:  LFVTSFFLLRLTVS--GQAPMRTPTPNSITMNNNTRFYSSNSFKRNRFS------SKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLG

Query:  RHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVAL
        RHSLVL+KASQ+TL I AKNWSESAHRFLK CVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIS HAPALYSL+VIQFNGSGGSKNDKDLRAGVAL
Subjt:  RHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVAL

Query:  CARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS----STAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHP
        CARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS    +T  A+RSWVTC+PH HHR AVGSS+ECPLLSDFGCNVPA EAHP
Subjt:  CARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS----STAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHP

Query:  ASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVIG
        ASRFMAEWFA+RGG PGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+G+GG  DGDG + NEN+ EDVI 
Subjt:  ASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVIG

Query:  ES
        ES
Subjt:  ES

F6HGA6 MYND-type domain-containing protein4.3e-15179.53Show/hide
Query:  SSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQN
        + KSDFF++LPDDL+I ILSKL+SSA  PSDFI  L+TCKRFN LG HSLVLS+AS ++L + AKNWSESA RFLK C DAGNVEACY LGMIRFYCLQN
Subjt:  SSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQN

Query:  RGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS-ST
        R SGASLMAKAAIS HAPALYSL+VIQFNGS GSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGV QN+ EGRRFLVQANARELAAVLSS S+
Subjt:  RGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSS-ST

Query:  AAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQAL
        A +SRSW+T NPH HHR   GS   CPLLSDFGCNVPAPEAHPASRF+AEWFA RGG PGPGLRLCSH GCGRPE RRHEFRRCSVCGIVNYCSRACQAL
Subjt:  AAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQAL

Query:  DWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVI
        DWKL+HKA CAP+E W  +DGD   A+G+G +     E+DVI
Subjt:  DWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVI

SwissProt top hitse value%identityAlignment
Q16342 Programmed cell death protein 23.5e-0434.09Show/hide
Query:  SECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECA
        ++ P  +DF    P  E  P     +    L+ GA      LC   GC  P+T       CS C    YCS+  Q LDW+L HK  CA
Subjt:  SECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECA

Q2YDC9 Programmed cell death protein 22.6e-0430.17Show/hide
Query:  SECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDG
        ++ P  +DF    P  E  P+    + +  L+ GA      LC   GC  P       +RCS C   +YCS+  Q+LDW+L HK  CA  +       D 
Subjt:  SECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDG

Query:  GEADGDGEILNENDEE
             + EI+ E ++E
Subjt:  GEADGDGEILNENDEE

Q9FK27 F-box protein At5g504501.4e-10960.23Show/hide
Query:  TRFYSSNSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEA
        T        + N  ++ ++ F+ L DDL+ISIL KLA+SASSPSDF+  L TCKR N LG H LVLSKA  +TL ++A+ WS+S+H+FLK CV+AGN++A
Subjt:  TRFYSSNSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEA

Query:  CYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQA
         Y LGMIRFYCLQN  SGASLMAKAAI  HAPALYSLSVIQFNGSGGSK DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGYGV +++ EGRR L+QA
Subjt:  CYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQA

Query:  NARELAAVLSSSTAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVC
        NARELA  L        RS++          ++ S  E   L+D    VP  E HP +RF+ EWF+        GLR+CSH GCGRPETR HEFRRCSVC
Subjt:  NARELAAVLSSSTAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVC

Query:  GIVNYCSRACQALDWKLQHKAECAPLEMW---PENDGDGGEA
        G VNYCSR CQALDW+ +HK EC PL++W       GD GEA
Subjt:  GIVNYCSRACQALDWKLQHKAECAPLEMW---PENDGDGGEA

Q9FYF9 F-box protein At1g673402.7e-13471Show/hide
Query:  SDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGS
        +D  DS+PDDL+ISIL KL S++  P+DFI  L+TCKR   L  + +VLS+ S + + + A NWSE +HRFLK+CVDAG++EACY LGMIRFYCLQNRG+
Subjt:  SDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGS

Query:  GASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSSTAAAS
        GASLMAKAAIS HAPALYSL+VIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV QN+ EGRRFLVQANARELAAVLSS   A S
Subjt:  GASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSSTAAAS

Query:  RSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGG-APGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWK
         +W++ +              CPLLSDFGCNVPAPE HPA+RF+A+WFA+RGG  PG GLRLCSH GCGRPETR+HEFRRCSVCG+VNYCSRACQALDWK
Subjt:  RSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGG-APGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWK

Query:  LQHKAECAPLEMWPENDGDGGEA----DGDG
        L+HK +CAP++ W E +GDGGE     DG+G
Subjt:  LQHKAECAPLEMWPENDGDGGEA----DGDG

Arabidopsis top hitse value%identityAlignment
AT1G17110.1 ubiquitin-specific protease 157.2e-0553.12Show/hide
Query:  RCSVCGIVNYCSRACQALDWKLQHKAECAPLE
        RCS C  V YCS  CQ + W++ HK EC P+E
Subjt:  RCSVCGIVNYCSRACQALDWKLQHKAECAPLE

AT1G17110.2 ubiquitin-specific protease 157.2e-0553.12Show/hide
Query:  RCSVCGIVNYCSRACQALDWKLQHKAECAPLE
        RCS C  V YCS  CQ + W++ HK EC P+E
Subjt:  RCSVCGIVNYCSRACQALDWKLQHKAECAPLE

AT1G67340.1 HCP-like superfamily protein with MYND-type zinc finger1.9e-13571Show/hide
Query:  SDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGS
        +D  DS+PDDL+ISIL KL S++  P+DFI  L+TCKR   L  + +VLS+ S + + + A NWSE +HRFLK+CVDAG++EACY LGMIRFYCLQNRG+
Subjt:  SDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGS

Query:  GASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSSTAAAS
        GASLMAKAAIS HAPALYSL+VIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV QN+ EGRRFLVQANARELAAVLSS   A S
Subjt:  GASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSSTAAAS

Query:  RSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGG-APGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWK
         +W++ +              CPLLSDFGCNVPAPE HPA+RF+A+WFA+RGG  PG GLRLCSH GCGRPETR+HEFRRCSVCG+VNYCSRACQALDWK
Subjt:  RSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGG-APGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWK

Query:  LQHKAECAPLEMWPENDGDGGEA----DGDG
        L+HK +CAP++ W E +GDGGE     DG+G
Subjt:  LQHKAECAPLEMWPENDGDGGEA----DGDG

AT2G24640.1 ubiquitin-specific protease 192.7e-0447.5Show/hide
Query:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC
        CG+  T     ++CS C  V YCS ACQ  DWK  HK +C
Subjt:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC

AT5G50450.1 HCP-like superfamily protein with MYND-type zinc finger9.7e-11160.23Show/hide
Query:  TRFYSSNSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEA
        T        + N  ++ ++ F+ L DDL+ISIL KLA+SASSPSDF+  L TCKR N LG H LVLSKA  +TL ++A+ WS+S+H+FLK CV+AGN++A
Subjt:  TRFYSSNSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVLSKASQRTLGISAKNWSESAHRFLKQCVDAGNVEA

Query:  CYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQA
         Y LGMIRFYCLQN  SGASLMAKAAI  HAPALYSLSVIQFNGSGGSK DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGYGV +++ EGRR L+QA
Subjt:  CYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNIMEGRRFLVQA

Query:  NARELAAVLSSSTAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVC
        NARELA  L        RS++          ++ S  E   L+D    VP  E HP +RF+ EWF+        GLR+CSH GCGRPETR HEFRRCSVC
Subjt:  NARELAAVLSSSTAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGRPETRRHEFRRCSVC

Query:  GIVNYCSRACQALDWKLQHKAECAPLEMW---PENDGDGGEA
        G VNYCSR CQALDW+ +HK EC PL++W       GD GEA
Subjt:  GIVNYCSRACQALDWKLQHKAECAPLEMW---PENDGDGGEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTTCTTGGTTTCTTTCTATATGAGCTCCTCTTTGTCACTTCCTTTTTCCTTCTGCGTTTGACTGTGTCAGGTCAGGCCCCCATGAGAACCCCCACTCCCAA
CAGCATCACCATGAACAACAACACACGATTTTATTCTTCTAATTCCTTCAAAAGAAATCGTTTCTCTTCTAAATCTGATTTCTTTGACTCTTTACCTGACGATCTTCTCA
TCTCTATTCTATCTAAACTTGCCTCCTCTGCTTCTTCCCCTTCCGATTTCATCAAAGCTTTGATTACATGCAAAAGATTCAACAATTTAGGGCGTCATTCCCTTGTTTTA
TCCAAAGCTTCTCAAAGAACTTTGGGAATTAGTGCCAAAAACTGGTCGGAATCCGCCCACCGGTTCCTTAAACAGTGCGTTGACGCTGGCAACGTTGAGGCTTGTTATAT
TCTCGGCATGATTCGATTTTACTGTCTGCAAAACCGAGGGAGTGGAGCTTCTTTAATGGCGAAGGCGGCGATTAGCTGCCACGCGCCGGCGCTATACTCACTCTCCGTCA
TACAGTTCAACGGCAGCGGTGGCTCAAAGAATGATAAGGATTTAAGAGCGGGTGTGGCCCTTTGTGCCAGAGCTGCCTTTTTGGGCCATATTGACGCTTTAAGGGAGCTT
GGACATTGCCTTCAAGATGGCTATGGGGTTTGTCAGAACATTATGGAGGGCCGTCGATTTCTAGTTCAAGCCAACGCAAGGGAACTCGCCGCCGTGCTGTCGTCGTCGAC
AGCGGCGGCTTCACGTTCTTGGGTCACGTGCAATCCGCACGCTCACCACCGCACGGCGGTGGGGTCGTCTTCCGAGTGCCCGTTGCTGAGCGATTTTGGGTGTAATGTTC
CGGCGCCGGAAGCTCATCCGGCGAGCAGGTTTATGGCGGAGTGGTTTGCCTTACGCGGTGGCGCGCCGGGGCCGGGGCTGAGGCTTTGTTCACATGTGGGGTGTGGGCGG
CCGGAGACAAGGAGGCACGAGTTTCGTCGGTGTTCGGTTTGTGGGATTGTTAACTACTGCTCACGTGCCTGTCAGGCGCTTGATTGGAAGCTGCAGCATAAAGCGGAATG
TGCGCCGTTGGAGATGTGGCCGGAAAATGACGGTGACGGCGGTGAAGCCGACGGCGACGGTGAAATTCTAAATGAGAATGACGAGGAGGATGTAATTGGGGAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
AATAATAATTAAAAAACAAAGAAAAAGAACATCATTATTTTGGAAGAGAGAAACCCACACACAAACGCACAGAAAATTAAATTAAATTTAAAAAAGGAAAGAGAAAGAAA
GAAAGAAAAGGTTATTTCTTTTGGGTTTGTAGTAGTACAGAACAGAGGAGGGAGCAGTCCAAAAAGCTGCCCCTCCTCCTGAGGACCCTCGCGGGCATTTCGGTCAACCC
AATTTTGACCTTTGAATACGACAACAACCAGCGAAGGCTAATTTGGTAAATTCGCACACCCTCCCCTGTTTTATTTTGTTGTTGTTGTTCATGTTCTTGGTTCTTGGTTT
CTTTCTATATGAGCTCCTCTTTGTCACTTCCTTTTTCCTTCTGCGTTTGACTGTGTCAGGTCAGGCCCCCATGAGAACCCCCACTCCCAACAGCATCACCATGAACAACA
ACACACGATTTTATTCTTCTAATTCCTTCAAAAGAAATCGTTTCTCTTCTAAATCTGATTTCTTTGACTCTTTACCTGACGATCTTCTCATCTCTATTCTATCTAAACTT
GCCTCCTCTGCTTCTTCCCCTTCCGATTTCATCAAAGCTTTGATTACATGCAAAAGATTCAACAATTTAGGGCGTCATTCCCTTGTTTTATCCAAAGCTTCTCAAAGAAC
TTTGGGAATTAGTGCCAAAAACTGGTCGGAATCCGCCCACCGGTTCCTTAAACAGTGCGTTGACGCTGGCAACGTTGAGGCTTGTTATATTCTCGGCATGATTCGATTTT
ACTGTCTGCAAAACCGAGGGAGTGGAGCTTCTTTAATGGCGAAGGCGGCGATTAGCTGCCACGCGCCGGCGCTATACTCACTCTCCGTCATACAGTTCAACGGCAGCGGT
GGCTCAAAGAATGATAAGGATTTAAGAGCGGGTGTGGCCCTTTGTGCCAGAGCTGCCTTTTTGGGCCATATTGACGCTTTAAGGGAGCTTGGACATTGCCTTCAAGATGG
CTATGGGGTTTGTCAGAACATTATGGAGGGCCGTCGATTTCTAGTTCAAGCCAACGCAAGGGAACTCGCCGCCGTGCTGTCGTCGTCGACAGCGGCGGCTTCACGTTCTT
GGGTCACGTGCAATCCGCACGCTCACCACCGCACGGCGGTGGGGTCGTCTTCCGAGTGCCCGTTGCTGAGCGATTTTGGGTGTAATGTTCCGGCGCCGGAAGCTCATCCG
GCGAGCAGGTTTATGGCGGAGTGGTTTGCCTTACGCGGTGGCGCGCCGGGGCCGGGGCTGAGGCTTTGTTCACATGTGGGGTGTGGGCGGCCGGAGACAAGGAGGCACGA
GTTTCGTCGGTGTTCGGTTTGTGGGATTGTTAACTACTGCTCACGTGCCTGTCAGGCGCTTGATTGGAAGCTGCAGCATAAAGCGGAATGTGCGCCGTTGGAGATGTGGC
CGGAAAATGACGGTGACGGCGGTGAAGCCGACGGCGACGGTGAAATTCTAAATGAGAATGACGAGGAGGATGTAATTGGGGAAAGTTAAATTAAACGGAGGTGAAGACTT
AATCTCCTTTACGGTTTTACGGAATTTAAACGGCGAGTAACGGTCGTTGTAACGGAAGAGGAAAAAAGGGACTACCTAACAAAGCAAAGGCCCATCCCTCCTAAAAGGCT
CAATCTCTAATCCCACCTCCCCCACTGTTTTTCCTTTCTTTTTTCCTTTTTAAACTTTTGTTAATATAATTTTTGTAGAGTACAGTGCAACGATTGTCAACTTCGACCTT
AGGTAATCAAAGATCTAATTTTTTTAGATTTTCAGAATCTTTAAAATTTTCAAACTGTATTATATTCTTCATTAGAATTATTCGTTTCCTTTACTATTTGATTAAATTTT
CGTTTCTGATTATTGTTTTGGAAGTTATAATAACCAATAGGAAACAAATTCAATTTAGTAGAGAATTGTCTAAAACAGACCGAGGCATCTTAGAATAGATTATGTGAAAT
TTGAGATTATTGAAAATGAATGATGAAG
Protein sequenceShow/hide protein sequence
MFLVLGFFLYELLFVTSFFLLRLTVSGQAPMRTPTPNSITMNNNTRFYSSNSFKRNRFSSKSDFFDSLPDDLLISILSKLASSASSPSDFIKALITCKRFNNLGRHSLVL
SKASQRTLGISAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAISCHAPALYSLSVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALREL
GHCLQDGYGVCQNIMEGRRFLVQANARELAAVLSSSTAAASRSWVTCNPHAHHRTAVGSSSECPLLSDFGCNVPAPEAHPASRFMAEWFALRGGAPGPGLRLCSHVGCGR
PETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGDGGEADGDGEILNENDEEDVIGES