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Clc08G17770 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G17770
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionHeat shock protein DnaJ, cysteine-rich domain containing protein
Genome locationClcChr08:28003539..28004350
RNA-Seq ExpressionClc08G17770
SyntenyClc08G17770
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061011.1 uncharacterized protein E6C27_scaffold501G001460 [Cucumis melo var. makuwa]2.5e-3886.46Show/hide
Query:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR
        MD IAL+QLATGLSVLAGAVVVKS+IEQKLP AG+MPRCPTC GSGRVTCLC RWSDGDVGCRSCSGSGRMSCRS GGGGRGRPI++QLST+Q +R
Subjt:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR

KAG6585227.1 hypothetical protein SDJN03_17960, partial [Cucurbita argyrosperma subsp. sororia]5.1e-3686.32Show/hide
Query:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLN
        MDPIALSQ+ATGLSVLAGAVVVKS+IEQK P A  MPRC TCNGSGRVTCLC RWSDGDVGCRSCSGSGRMSCRS GGGGRGRPIT+QLS +Q N
Subjt:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLN

KGN62638.2 hypothetical protein Csa_018726 [Cucumis sativus]8.4e-3189.74Show/hide
Query:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGG
        MD IALSQLATGLSVLAGAVVVKS+IEQKLP AG+MPRCPTC GSGRVTC+C RWSDGDVGCRSCSGSGRMSCRS GG
Subjt:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGG

XP_004142934.1 uncharacterized protein LOC101220122 [Cucumis sativus]8.4e-3987.5Show/hide
Query:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR
        MD IALSQLATGLSVLAGAVVVKS+IEQKLP AG+MPRCPTC GSGRVTC+C RWSDGDVGCRSCSGSGRMSCRS GGGGRGRPIT+QLS +Q NR
Subjt:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR

XP_022132135.1 uncharacterized protein LOC111005075 [Momordica charantia]4.8e-3478.12Show/hide
Query:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR
        MDP+ L+QLATGLSV+AGAVVVKS+++QK P AG +P CPTCNGSGRVTC+C RWSDGD GCRSC+GSGRMSCRS GGGGRGRPIT+QLS  Q NR
Subjt:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR

TrEMBL top hitse value%identityAlignment
A0A0A0LKQ8 Uncharacterized protein4.1e-3987.5Show/hide
Query:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR
        MD IALSQLATGLSVLAGAVVVKS+IEQKLP AG+MPRCPTC GSGRVTC+C RWSDGDVGCRSCSGSGRMSCRS GGGGRGRPIT+QLS +Q NR
Subjt:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR

A0A5A7V5E2 Uncharacterized protein1.2e-3886.46Show/hide
Query:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR
        MD IAL+QLATGLSVLAGAVVVKS+IEQKLP AG+MPRCPTC GSGRVTCLC RWSDGDVGCRSCSGSGRMSCRS GGGGRGRPI++QLST+Q +R
Subjt:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR

A0A5N6R398 Uncharacterized protein1.7e-2970.83Show/hide
Query:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR
        M PI L+QLATGLSVLAGAV+VKS+++QK P AG  PRCP+CNG+GRVTCLC+RWSDGDVGCR+C+GSGRM CRS GG G GRP+  QL     NR
Subjt:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR

A0A6J1BRL0 uncharacterized protein LOC1110050752.3e-3478.12Show/hide
Query:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR
        MDP+ L+QLATGLSV+AGAVVVKS+++QK P AG +P CPTCNGSGRVTC+C RWSDGD GCRSC+GSGRMSCRS GGGGRGRPIT+QLS  Q NR
Subjt:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR

W9RCB8 Uncharacterized protein1.3e-2968.42Show/hide
Query:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLN
        M+PI L+Q+ATGLSVL GAV+VKS+++QK P AG  PRCP+CNG+GRVTCLC+RWSDGD+GCR+C+GSGRM C S GG G GRPIT Q+S  + N
Subjt:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G43260.1 chaperone protein dnaJ-related2.4e-3164.58Show/hide
Query:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR
        M PI ++QLATG+SVLAGAV +KS+++QK P AG  PRCPTCNG+GRVTC C+RWSDGDVGCR CSGSGR +C + GG G GRP+  Q++    NR
Subjt:  MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAATTGCTCTGAGTCAGCTTGCCACCGGCCTGAGTGTGCTGGCCGGCGCCGTGGTGGTGAAGTCCATCATTGAACAGAAACTACCGACGGCAGGGACGATGCC
GAGGTGTCCGACTTGTAATGGGTCGGGTCGGGTCACATGTCTATGTGCCCGGTGGTCGGATGGAGATGTTGGGTGCCGATCATGTTCCGGGTCGGGTCGGATGTCGTGTA
GAAGTCGCGGTGGTGGGGGAAGAGGGCGGCCGATCACCCTACAATTATCGACTAACCAACTAAACCGTTGA
mRNA sequenceShow/hide mRNA sequence
GTTACTTCGTTAAAGACCCACTTCTAAGGAAAATCTAACGAAGTAACCAATTTTGTATTCCTTTTCTTCTAACACTTCCAATTCCAGTTTCTTTTTGTTTATTTAAACCC
TAATTTTCCCCCTTTTCTTGTTCATCCTCTTTCATTTCATTTCTTAATTTTCTTCTCAAATATCCTTTTTCCAATCTAAACAAAATGGATCCAATTGCTCTGAGTCAGCT
TGCCACCGGCCTGAGTGTGCTGGCCGGCGCCGTGGTGGTGAAGTCCATCATTGAACAGAAACTACCGACGGCAGGGACGATGCCGAGGTGTCCGACTTGTAATGGGTCGG
GTCGGGTCACATGTCTATGTGCCCGGTGGTCGGATGGAGATGTTGGGTGCCGATCATGTTCCGGGTCGGGTCGGATGTCGTGTAGAAGTCGCGGTGGTGGGGGAAGAGGG
CGGCCGATCACCCTACAATTATCGACTAACCAACTAAACCGTTGATTTTAAAGATTTTCTTTTTTAATATTTGAACTTGTATTCTACTTAGCTTATGCTTATTTTGGTCA
TTCAAATAAGTTAAATATTTGTCAAGTAAAGGTTCATTATTTGTTTATAATAATATTTTTGTGATTTACTATAAGTTCTTGCTTTGGGATTTTGGGTGTTTTTAGAATAT
TACATCACAACAAGAAAGGTTAACAAATATCAACTAGAAAAGAATAATTAGAATAAGTATTAATCATATGTAAAGAACATCTATAAATATTTTGTCCCGATATAAATTTT
ATTAGATAATCGTTTAATTTAAAATCAACTTACAGACATTAC
Protein sequenceShow/hide protein sequence
MDPIALSQLATGLSVLAGAVVVKSIIEQKLPTAGTMPRCPTCNGSGRVTCLCARWSDGDVGCRSCSGSGRMSCRSRGGGGRGRPITLQLSTNQLNR