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Clc08G17810 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G17810
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr08:28016103..28018078
RNA-Seq ExpressionClc08G17810
SyntenyClc08G17810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAS88880.1 Os04g0379916 [Oryza sativa Japonica Group]6.1e-0438.89Show/hide
Query:  THKHNPEPSAHRLTVLLPVF--PWTMKLVLSSNEVTMPILFSGPSPCPNSPRARACSCFVPYSIHGIQHCLM
        +H ++P P+   L  LL +F    + K+ +   ++TMP+LFS P  CPNSP   AC+ F+  +I G++HCL+
Subjt:  THKHNPEPSAHRLTVLLPVF--PWTMKLVLSSNEVTMPILFSGPSPCPNSPRARACSCFVPYSIHGIQHCLM
TrEMBL top hitse value%identityAlignment
A0A0P0W9C1 Os04g0379916 protein3.0e-0438.89Show/hide
Query:  THKHNPEPSAHRLTVLLPVF--PWTMKLVLSSNEVTMPILFSGPSPCPNSPRARACSCFVPYSIHGIQHCLM
        +H ++P P+   L  LL +F    + K+ +   ++TMP+LFS P  CPNSP   AC+ F+  +I G++HCL+
Subjt:  THKHNPEPSAHRLTVLLPVF--PWTMKLVLSSNEVTMPILFSGPSPCPNSPRARACSCFVPYSIHGIQHCLM
A0A7I8IUT2 Hypothetical protein6.6e-0448.78Show/hide
Query:  EVTMPILFSGPSPCPNSPRARACSCFVPYSIHGIQHCLMLG
        ++ MPILF GP  CP+ PR+ A +C +P ++ G+QHCL+ G
Subjt:  EVTMPILFSGPSPCPNSPRARACSCFVPYSIHGIQHCLMLG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGAAAAGAAAAAGAAGTTGCCTGGAGGTGGAGCGGAGAGTGGAGGCCATAACGAACTTAGGAGATCTGAGACTTGCAAGCTGCGGCATCGCAAAAGACGGCAACT
TAGGAGATTGAGAGGTGAGAGGATGGAATTTGAGCGCCATTTTCCGACTGCTTCCGTTATCAAGGTTCTATATTCCGGCGAGTTGGTCGGAAAACGGTTCCTGAAGGGAG
GAGGAAGAAGAATATTGGCGTGGCTGTTGAAATGGAAGAAGAAACCGAGGCCACTTTACGTAACCCACAAACATAATCCTGAGCCTTCTGCCCATCGCCTGACAGTCCTT
CTGCCAGTGTTCCCATGGACGATGAAGCTTGTCCTCTCTTCAAATGAGGTCACCATGCCTATTCTCTTCAGCGGTCCAAGCCCTTGTCCAAATAGCCCAAGAGCTAGGGC
TTGCTCCTGTTTCGTCCCTTACTCCATCCATGGTATTCAACATTGTCTGATGCTGGGTCTGGCAACAAATCCTGTGGTTGCCAACACCTCTCCACTGGTTTCAAATCAAC
CAAAATGTTCTGTTCAACCCAATCCTCCAAAGATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGAAAAGAAAAAGAAGTTGCCTGGAGGTGGAGCGGAGAGTGGAGGCCATAACGAACTTAGGAGATCTGAGACTTGCAAGCTGCGGCATCGCAAAAGACGGCAACT
TAGGAGATTGAGAGGTGAGAGGATGGAATTTGAGCGCCATTTTCCGACTGCTTCCGTTATCAAGGTTCTATATTCCGGCGAGTTGGTCGGAAAACGGTTCCTGAAGGGAG
GAGGAAGAAGAATATTGGCGTGGCTGTTGAAATGGAAGAAGAAACCGAGGCCACTTTACGTAACCCACAAACATAATCCTGAGCCTTCTGCCCATCGCCTGACAGTCCTT
CTGCCAGTGTTCCCATGGACGATGAAGCTTGTCCTCTCTTCAAATGAGGTCACCATGCCTATTCTCTTCAGCGGTCCAAGCCCTTGTCCAAATAGCCCAAGAGCTAGGGC
TTGCTCCTGTTTCGTCCCTTACTCCATCCATGGTATTCAACATTGTCTGATGCTGGGTCTGGCAACAAATCCTGTGGTTGCCAACACCTCTCCACTGGTTTCAAATCAAC
CAAAATGTTCTGTTCAACCCAATCCTCCAAAGATTTAA
Protein sequenceShow/hide protein sequence
MREKKKKLPGGGAESGGHNELRRSETCKLRHRKRRQLRRLRGERMEFERHFPTASVIKVLYSGELVGKRFLKGGGRRILAWLLKWKKKPRPLYVTHKHNPEPSAHRLTVL
LPVFPWTMKLVLSSNEVTMPILFSGPSPCPNSPRARACSCFVPYSIHGIQHCLMLGLATNPVVANTSPLVSNQPKCSVQPNPPKI