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Clc08G18170 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G18170
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionanther-specific protein BCP1-like
Genome locationClcChr08:28275630..28276094
RNA-Seq ExpressionClc08G18170
SyntenyClc08G18170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598249.1 Protein terminal ear1, partial [Cucurbita argyrosperma subsp. sororia]8.3e-2773.15Show/hide
Query:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV
        MARQFVV ALVLFA+VGFA AASP+E+PKGSA+N DVG  LAPGA+ EIGNT+G DA  GSDDVVE PIGGPG   G  VPAEAP SGASAV+FS   A+
Subjt:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV

Query:  AAVAGFFF
         AVAGF F
Subjt:  AAVAGFFF

XP_016899951.1 PREDICTED: classical arabinogalactan protein 11-like [Cucumis melo]1.2e-3383.33Show/hide
Query:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV
        MARQFVVFALVLFAV+GFACAASPAEAPKGSAD+A  GA LAP A+N IGNTEGADAPAGS++VVEAP+GGPG+AA G VPA AP SGASA++FSAVAAV
Subjt:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV

Query:  AAVAGFFF
        AAVAGFFF
Subjt:  AAVAGFFF

XP_022962552.1 anther-specific protein BCP1-like [Cucurbita moschata]5.8e-2875Show/hide
Query:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV
        MARQFVV ALVLFA+VGFA AASP+E+PKGSA+N DVG  LAPGA+ EIGNT+G DA  GSDDVVE PIGGPG   G  VPAEAP SGASAVEFS   A+
Subjt:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV

Query:  AAVAGFFF
         AVAGFFF
Subjt:  AAVAGFFF

XP_022997549.1 anther-specific protein BCP1-like [Cucurbita maxima]1.2e-3076.85Show/hide
Query:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV
        MARQFVV AL+LFA+VGFACAASPAE+PKGSA+N DVG  LAPGA+ EIGNT+G DA  GSDDVVE PIGGPG   G  VPAEAP SGASAVE SAVAA+
Subjt:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV

Query:  AAVAGFFF
         AVAG+FF
Subjt:  AAVAGFFF

XP_038885796.1 outer membrane protein H.8-like [Benincasa hispida]4.7e-3887.96Show/hide
Query:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV
        MARQFVVFALVLFAV+GFACAA+PAE+PK SADNADVGAQLAPGAENEIGNTEGADAPAGS+DVVEAPIGGP AAA GFVPAE+P SGASAV+FSA  A 
Subjt:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV

Query:  AAVAGFFF
        AAVAGFFF
Subjt:  AAVAGFFF

TrEMBL top hitse value%identityAlignment
A0A0A0LQR1 Uncharacterized protein9.6e-3787.04Show/hide
Query:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV
        MARQFVVFALVLFAV+GF CAA+PAEAPKGSAD A VGAQLAPGAENEIGNTEGADAPAGS+DVVEAP+GGPGA AGGFVPA AP S ASA+EFSA AAV
Subjt:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV

Query:  AAVAGFFF
         AVAGFFF
Subjt:  AAVAGFFF

A0A1S4DVD7 classical arabinogalactan protein 11-like5.8e-3483.33Show/hide
Query:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV
        MARQFVVFALVLFAV+GFACAASPAEAPKGSAD+A  GA LAP A+N IGNTEGADAPAGS++VVEAP+GGPG+AA G VPA AP SGASA++FSAVAAV
Subjt:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV

Query:  AAVAGFFF
        AAVAGFFF
Subjt:  AAVAGFFF

A0A6J1DFK4 anther-specific protein BCP19.0e-2772.07Show/hide
Query:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADN--ADVGAQLAPGAENEIGNTEG-ADAPAGSDDVVEAPIGGPGAAAGG-FVPAEAPNSGASAVEFSA
        MARQFV FALVLFAVVGFACAASPAE PK +A++  AD GA  APGA+NEIGNT+G A AP   +D+VE P+GGPGAAAGG  VPAE+P SGA AV+ SA
Subjt:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADN--ADVGAQLAPGAENEIGNTEG-ADAPAGSDDVVEAPIGGPGAAAGG-FVPAEAPNSGASAVEFSA

Query:  VAAVAAVAGFF
        VA VAA+AGFF
Subjt:  VAAVAAVAGFF

A0A6J1HCZ7 anther-specific protein BCP1-like2.8e-2875Show/hide
Query:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV
        MARQFVV ALVLFA+VGFA AASP+E+PKGSA+N DVG  LAPGA+ EIGNT+G DA  GSDDVVE PIGGPG   G  VPAEAP SGASAVEFS   A+
Subjt:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV

Query:  AAVAGFFF
         AVAGFFF
Subjt:  AAVAGFFF

A0A6J1KBR3 anther-specific protein BCP1-like6.0e-3176.85Show/hide
Query:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV
        MARQFVV AL+LFA+VGFACAASPAE+PKGSA+N DVG  LAPGA+ EIGNT+G DA  GSDDVVE PIGGPG   G  VPAEAP SGASAVE SAVAA+
Subjt:  MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAV

Query:  AAVAGFFF
         AVAG+FF
Subjt:  AAVAGFFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACGCCAATTTGTTGTCTTTGCTCTCGTCCTCTTCGCCGTCGTTGGCTTCGCCTGCGCAGCGTCACCCGCCGAAGCTCCCAAGGGCTCTGCTGATAACGCCGACGT
CGGAGCTCAATTGGCTCCCGGCGCCGAAAACGAGATCGGAAACACCGAGGGGGCTGATGCTCCCGCAGGAAGCGACGACGTGGTTGAAGCCCCTATTGGCGGACCTGGTG
CTGCAGCAGGTGGATTTGTCCCTGCTGAAGCTCCTAACAGTGGTGCCTCTGCCGTGGAATTTTCTGCTGTCGCTGCCGTCGCCGCGGTTGCAGGATTTTTCTTCTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAAGCACCAAAAATGGCACGCCAATTTGTTGTCTTTGCTCTCGTCCTCTTCGCCGTCGTTGGCTTCGCCTGCGCAGCGTCACCCGCCGAAGCTCCCAAGGG
CTCTGCTGATAACGCCGACGTCGGAGCTCAATTGGCTCCCGGCGCCGAAAACGAGATCGGAAACACCGAGGGGGCTGATGCTCCCGCAGGAAGCGACGACGTGGTTGAAG
CCCCTATTGGCGGACCTGGTGCTGCAGCAGGTGGATTTGTCCCTGCTGAAGCTCCTAACAGTGGTGCCTCTGCCGTGGAATTTTCTGCTGTCGCTGCCGTCGCCGCGGTT
GCAGGATTTTTCTTCTAAGTGGAGGAGAGATTGATTTCATGTGTTTTGTGTGCTTTCATATTTTTAATCATTTGCAATTGTTCGTGAAATGGAAATTCGAATAAAAAGGA
AATAAGTGAGGGTTATTACAATTTA
Protein sequenceShow/hide protein sequence
MARQFVVFALVLFAVVGFACAASPAEAPKGSADNADVGAQLAPGAENEIGNTEGADAPAGSDDVVEAPIGGPGAAAGGFVPAEAPNSGASAVEFSAVAAVAAVAGFFF