; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G18310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G18310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionOcticosapeptide/Phox/Bem1p (PB1) domain-containing protein
Genome locationClcChr08:28364071..28367390
RNA-Seq ExpressionClc08G18310
SyntenyClc08G18310
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598239.1 hypothetical protein SDJN03_08017, partial [Cucurbita argyrosperma subsp. sororia]7.0e-7988Show/hide
Query:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV
        MGRPPLHR AL F+PTPTIKFLCSYGGKILPRYPDG+LRYHGGETRLL+ NRSISFS+LLLKFGELCGTSISVSFRCQLPKEDLDALVS+TSDEDLANL+
Subjt:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV

Query:  EEYDRAASPSSSLKIRAFLSPPKYAKRISPPSSMASFSSSSLSMLVAHRCFRRRMSPPNASYLERSASAVPFSEF
        EEYDRAAS SSSLKIRAFL PPKYAKRISPPSS+ASFSSS  SM  AHRCF RRMSPP+ASYLERSASAVP S +
Subjt:  EEYDRAASPSSSLKIRAFLSPPKYAKRISPPSSMASFSSSSLSMLVAHRCFRRRMSPPNASYLERSASAVPFSEF

XP_004142964.1 uncharacterized protein LOC101207008 [Cucumis sativus]2.2e-8089.71Show/hide
Query:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV
        MGRPPLHRNA+ FRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTS SVSFRCQLP+EDLDALVSVTSDEDLANL+
Subjt:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV

Query:  EEYDRAASPSSSLKIRAFLSPPKYAKRISPPSSMASFSSSSLSMLVAHRCFRRRMSPPNASYLERSASAVPFSEF
        EEYDRAASPSSS+KIRAFLSPPKYAKRISPPSSM SFSSS     VAHRCF RRMSPP+ SYLERS+SAVPFS +
Subjt:  EEYDRAASPSSSLKIRAFLSPPKYAKRISPPSSMASFSSSSLSMLVAHRCFRRRMSPPNASYLERSASAVPFSEF

XP_022961752.1 uncharacterized protein LOC111462427 [Cucurbita moschata]6.6e-7786.52Show/hide
Query:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV
        MGRPPLHR AL  +PTPTIKFLCSYGGKILPRYPDG+LRYHGGETRLL+ NRSISFS+LLLKFGELCGTSISVSFRCQLPKEDLDALVS+TSDEDLANL+
Subjt:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV

Query:  EEYDRAASPSSSLKIRAFLSPPKYAKRISPPSSMASFSSSS---LSMLVAHRCFRRRMSPPNASYLERSASAVPFSEF
        EEYDRAAS SSSLKIRAFL PPKYAKRISPPSSM SFSSSS    SM  AHRCF RRMSPP+ASYLERSASAVP S +
Subjt:  EEYDRAASPSSSLKIRAFLSPPKYAKRISPPSSMASFSSSS---LSMLVAHRCFRRRMSPPNASYLERSASAVPFSEF

XP_022996772.1 uncharacterized protein LOC111491906 [Cucurbita maxima]2.5e-7687.57Show/hide
Query:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV
        MGRPPLHR AL F+PTPTIKFLCSYGGKILPRYPDG+LRY GGETRLL+ NRSISFS+LLLKFGELCGTSISVSFRCQLPKEDLDALVS+TSDEDLANL+
Subjt:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV

Query:  EEYDRAASPSSSLKIRAFLSPPKYAKRISPPSSMAS-FSSSSL-SMLVAHRCFRRRMSPPNASYLERSASAVPFSEF
        EEYDRAAS SSSLKIRAFL PPKYAKRISPPSSMAS FSSSSL SM  AHRCF RRMSPP+ASY ERSASAVP S +
Subjt:  EEYDRAASPSSSLKIRAFLSPPKYAKRISPPSSMAS-FSSSSL-SMLVAHRCFRRRMSPPNASYLERSASAVPFSEF

XP_023545452.1 uncharacterized protein LOC111804876 isoform X1 [Cucurbita pepo subsp. pepo]5.0e-7787.15Show/hide
Query:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV
        MGRPPLHR AL F+PTPTIKFLCSYGGKILPRYPDG+LRYHGGETRLL+ NRSISFS+LLLKFGELCGTSISVSFRCQLPKEDLDALVS+TSDEDLANL+
Subjt:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV

Query:  EEYDRAA--SPSSSLKIRAFLSPPKYAKRISPPSSMASFSSSS--LSMLVAHRCFRRRMSPPNASYLERSASAVPFSEF
        EEYDRAA  S SSSLKIRAFL PPKYAKRISPPSSMASFSSSS   SM  AHRCF RRMSPP+ASYLERSASAVP S +
Subjt:  EEYDRAA--SPSSSLKIRAFLSPPKYAKRISPPSSMASFSSSS--LSMLVAHRCFRRRMSPPNASYLERSASAVPFSEF

TrEMBL top hitse value%identityAlignment
A0A0A0LKJ2 PB1 domain-containing protein1.1e-8089.71Show/hide
Query:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV
        MGRPPLHRNA+ FRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTS SVSFRCQLP+EDLDALVSVTSDEDLANL+
Subjt:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV

Query:  EEYDRAASPSSSLKIRAFLSPPKYAKRISPPSSMASFSSSSLSMLVAHRCFRRRMSPPNASYLERSASAVPFSEF
        EEYDRAASPSSS+KIRAFLSPPKYAKRISPPSSM SFSSS     VAHRCF RRMSPP+ SYLERS+SAVPFS +
Subjt:  EEYDRAASPSSSLKIRAFLSPPKYAKRISPPSSMASFSSSSLSMLVAHRCFRRRMSPPNASYLERSASAVPFSEF

A0A5J5AHC4 PB1 domain-containing protein7.1e-5377.03Show/hide
Query:  PTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLVEEYDRAASPSSSLK
        PTPTIKFLCSYGGKILPRYPDGKLRYHGGETR+L+V+RSISF+ELL+K GELCGT  SVS RCQLP EDLDALVS+TSDEDLANL+EEYD+AASPSSSLK
Subjt:  PTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLVEEYDRAASPSSSLK

Query:  IRAFLSPPKYAKRISPPSSMASFSSSSLSMLV-----AHRCFRRRMSP
        IRAFLSPPK  K+ISPP S AS  SSS S  V     + RCFR+  +P
Subjt:  IRAFLSPPKYAKRISPPSSMASFSSSSLSMLV-----AHRCFRRRMSP

A0A6J1BRT0 uncharacterized protein LOC1110051211.0e-5975.44Show/hide
Query:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV
        MGRPPLHRNAL      T+KFLCSYGGKILPRYPDGKLRYHGGETRLL+V+RSISF+ELL KFG+LCGTS+ VSFRCQLP+EDLDALVS+TSDEDLANL+
Subjt:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV

Query:  EEYDRAASPSSS--LKIRAFLSPPK-YAKRISPPSSMASFSSSSLSMLVAHRCFRRRMSPPNASYLERSAS
        EEYDRAASP SS   KIRAFLSPPK Y K ISPP S  S SSSS SM   HRC R    P + SY ERS S
Subjt:  EEYDRAASPSSS--LKIRAFLSPPK-YAKRISPPSSMASFSSSSLSMLVAHRCFRRRMSPPNASYLERSAS

A0A6J1HAZ2 uncharacterized protein LOC1114624273.2e-7786.52Show/hide
Query:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV
        MGRPPLHR AL  +PTPTIKFLCSYGGKILPRYPDG+LRYHGGETRLL+ NRSISFS+LLLKFGELCGTSISVSFRCQLPKEDLDALVS+TSDEDLANL+
Subjt:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV

Query:  EEYDRAASPSSSLKIRAFLSPPKYAKRISPPSSMASFSSSS---LSMLVAHRCFRRRMSPPNASYLERSASAVPFSEF
        EEYDRAAS SSSLKIRAFL PPKYAKRISPPSSM SFSSSS    SM  AHRCF RRMSPP+ASYLERSASAVP S +
Subjt:  EEYDRAASPSSSLKIRAFLSPPKYAKRISPPSSMASFSSSS---LSMLVAHRCFRRRMSPPNASYLERSASAVPFSEF

A0A6J1K2Y4 uncharacterized protein LOC1114919061.2e-7687.57Show/hide
Query:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV
        MGRPPLHR AL F+PTPTIKFLCSYGGKILPRYPDG+LRY GGETRLL+ NRSISFS+LLLKFGELCGTSISVSFRCQLPKEDLDALVS+TSDEDLANL+
Subjt:  MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLV

Query:  EEYDRAASPSSSLKIRAFLSPPKYAKRISPPSSMAS-FSSSSL-SMLVAHRCFRRRMSPPNASYLERSASAVPFSEF
        EEYDRAAS SSSLKIRAFL PPKYAKRISPPSSMAS FSSSSL SM  AHRCF RRMSPP+ASY ERSASAVP S +
Subjt:  EEYDRAASPSSSLKIRAFLSPPKYAKRISPPSSMAS-FSSSSL-SMLVAHRCFRRRMSPPNASYLERSASAVPFSEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G70640.1 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein1.2e-3655.06Show/hide
Query:  TPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLVEEYDRAASPSSSLKI
        T T+KFLCSYGG+I PRYPDGKLRY GG+TR+LSV R+ISF+EL  K GE+CG +++ S RCQLP +DLDALV+V SDEDL NL+EEYD A   ++ +KI
Subjt:  TPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLVEEYDRAASPSSSLKI

Query:  RAFLSPPKYAK---RISPPSSMASFSSSSLSMLVAHRCFRRRMSPPNASYLERSASAV
          FLSP K  +     SPP S  S SSS            R  SPP+ S  E   S V
Subjt:  RAFLSPPKYAK---RISPPSSMASFSSSSLSMLVAHRCFRRRMSPPNASYLERSASAV

AT3G26510.1 Octicosapeptide/Phox/Bem1p family protein1.2e-3965.15Show/hide
Query:  TIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELC---GTSISVSFRCQLPKEDLDALVSVTSDEDLANLVEEYDRAASPSSSLK
        TIKFLCSYGGKILPRYPDGKLRY+GG TR+L+V RS+SFSEL  K  E+C   G SI+V+ RCQLP EDLDALVS+TSDEDL NL+EEYD  +S SS +K
Subjt:  TIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELC---GTSISVSFRCQLPKEDLDALVSVTSDEDLANLVEEYDRAASPSSSLK

Query:  IRAFLSPPKYA---KRISPPSSMASFSSSSLS
        IR FL+PPK A   K+  PP ++ S +++S S
Subjt:  IRAFLSPPKYA---KRISPPSSMASFSSSSLS

AT3G26510.2 Octicosapeptide/Phox/Bem1p family protein1.2e-3965.15Show/hide
Query:  TIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELC---GTSISVSFRCQLPKEDLDALVSVTSDEDLANLVEEYDRAASPSSSLK
        TIKFLCSYGGKILPRYPDGKLRY+GG TR+L+V RS+SFSEL  K  E+C   G SI+V+ RCQLP EDLDALVS+TSDEDL NL+EEYD  +S SS +K
Subjt:  TIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELC---GTSISVSFRCQLPKEDLDALVSVTSDEDLANLVEEYDRAASPSSSLK

Query:  IRAFLSPPKYA---KRISPPSSMASFSSSSLS
        IR FL+PPK A   K+  PP ++ S +++S S
Subjt:  IRAFLSPPKYA---KRISPPSSMASFSSSSLS

AT3G26510.3 Octicosapeptide/Phox/Bem1p family protein1.2e-3965.15Show/hide
Query:  TIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELC---GTSISVSFRCQLPKEDLDALVSVTSDEDLANLVEEYDRAASPSSSLK
        TIKFLCSYGGKILPRYPDGKLRY+GG TR+L+V RS+SFSEL  K  E+C   G SI+V+ RCQLP EDLDALVS+TSDEDL NL+EEYD  +S SS +K
Subjt:  TIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELC---GTSISVSFRCQLPKEDLDALVSVTSDEDLANLVEEYDRAASPSSSLK

Query:  IRAFLSPPKYA---KRISPPSSMASFSSSSLS
        IR FL+PPK A   K+  PP ++ S +++S S
Subjt:  IRAFLSPPKYA---KRISPPSSMASFSSSSLS

AT3G26510.4 Octicosapeptide/Phox/Bem1p family protein1.2e-3965.15Show/hide
Query:  TIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELC---GTSISVSFRCQLPKEDLDALVSVTSDEDLANLVEEYDRAASPSSSLK
        TIKFLCSYGGKILPRYPDGKLRY+GG TR+L+V RS+SFSEL  K  E+C   G SI+V+ RCQLP EDLDALVS+TSDEDL NL+EEYD  +S SS +K
Subjt:  TIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELC---GTSISVSFRCQLPKEDLDALVSVTSDEDLANLVEEYDRAASPSSSLK

Query:  IRAFLSPPKYA---KRISPPSSMASFSSSSLS
        IR FL+PPK A   K+  PP ++ S +++S S
Subjt:  IRAFLSPPKYA---KRISPPSSMASFSSSSLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGACCTCCCCTCCACCGCAACGCACTCAACTTCAGACCTACTCCCACCATCAAGTTCCTCTGCAGCTACGGCGGCAAGATTCTCCCTCGTTATCCCGACGGCAA
GCTCCGTTATCACGGTGGCGAAACCCGCCTTCTTTCTGTCAACCGCTCCATTTCCTTCTCTGAGCTCTTGTTGAAGTTTGGGGAGCTCTGCGGAACCTCAATTTCTGTGA
GCTTCCGTTGCCAGTTGCCTAAAGAAGACCTCGATGCTCTAGTCTCCGTCACCTCCGATGAAGATCTCGCCAATCTCGTCGAGGAATACGATCGAGCGGCTTCCCCTTCC
TCATCGTTGAAGATCAGAGCATTCCTTTCCCCTCCCAAATATGCCAAAAGAATCTCCCCTCCTTCTTCAATGGCCTCCTTCTCCTCCTCCTCCTTGTCGATGTTGGTGGC
TCACCGTTGCTTTCGTCGTCGGATGTCACCGCCAAATGCTTCCTACTTGGAGAGATCTGCATCGGCCGTTCCTTTCAGTGAGTTTTGGCATCCACAGATTCTCGCGGACG
GACTCCAGATTAGAGCTGTGGAGACAAATGAGGAAATGGGAAGGCTAATGGACGGACAGTGTTTTGGGCTGGGCCTGGAGGAGGAGCATTGGCCCGAATCCGGAGCTGTA
GTCGCAGTCGTCCCAAGGCGGGGCCCCGCACCGCTGCCCTTCAAATCTTGA
mRNA sequenceShow/hide mRNA sequence
GGGGCTAAAAAAGAATAAAAAGGAAAGAAAAGTGTATAAATAAGGGAAAGAGTGTCCGGTGGATTGGATTGGGTTGAAGAAGAAGAAGAAGCAGCAGCAGCAAAGGCCTA
ACAACCTCTCCTCTCTTATCTCTCTTTTCCTCTTTAAAAACAATTTTGGTGATACGACACATGGGCAGACCTCCCCTCCACCGCAACGCACTCAACTTCAGACCTACTCC
CACCATCAAGTTCCTCTGCAGCTACGGCGGCAAGATTCTCCCTCGTTATCCCGACGGCAAGCTCCGTTATCACGGTGGCGAAACCCGCCTTCTTTCTGTCAACCGCTCCA
TTTCCTTCTCTGAGCTCTTGTTGAAGTTTGGGGAGCTCTGCGGAACCTCAATTTCTGTGAGCTTCCGTTGCCAGTTGCCTAAAGAAGACCTCGATGCTCTAGTCTCCGTC
ACCTCCGATGAAGATCTCGCCAATCTCGTCGAGGAATACGATCGAGCGGCTTCCCCTTCCTCATCGTTGAAGATCAGAGCATTCCTTTCCCCTCCCAAATATGCCAAAAG
AATCTCCCCTCCTTCTTCAATGGCCTCCTTCTCCTCCTCCTCCTTGTCGATGTTGGTGGCTCACCGTTGCTTTCGTCGTCGGATGTCACCGCCAAATGCTTCCTACTTGG
AGAGATCTGCATCGGCCGTTCCTTTCAGTGAGTTTTGGCATCCACAGATTCTCGCGGACGGACTCCAGATTAGAGCTGTGGAGACAAATGAGGAAATGGGAAGGCTAATG
GACGGACAGTGTTTTGGGCTGGGCCTGGAGGAGGAGCATTGGCCCGAATCCGGAGCTGTAGTCGCAGTCGTCCCAAGGCGGGGCCCCGCACCGCTGCCCTTCAAATCTTG
A
Protein sequenceShow/hide protein sequence
MGRPPLHRNALNFRPTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLSVNRSISFSELLLKFGELCGTSISVSFRCQLPKEDLDALVSVTSDEDLANLVEEYDRAASPS
SSLKIRAFLSPPKYAKRISPPSSMASFSSSSLSMLVAHRCFRRRMSPPNASYLERSASAVPFSEFWHPQILADGLQIRAVETNEEMGRLMDGQCFGLGLEEEHWPESGAV
VAVVPRRGPAPLPFKS