; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc08G18460 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc08G18460
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionHomeobox protein knotted-1-like 1
Genome locationClcChr08:28433903..28447180
RNA-Seq ExpressionClc08G18460
SyntenyClc08G18460
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001356 - Homeobox domain
IPR005539 - ELK domain
IPR005540 - KNOX1
IPR005541 - KNOX2
IPR008422 - Homeobox KN domain
IPR009057 - Homeobox-like domain superfamily
IPR017970 - Homeobox, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029210.1 Homeobox protein knotted-1-like 6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-13287.12Show/hide
Query:  ISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLS
        + + +P S TPDFPL +D  +L KAKILSHPTYPRLL AYIDC KVGAPPEIACLLEEIRRENDSHKQNA+STCFG DPELDEFME YCDMLVKYKSDLS
Subjt:  ISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLS

Query:  RPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWW
        RPFHEASSFL++I+LQLS+LCAGASTR+ SNEDAMSSDDELNWGERE+QDAQMR+EDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVL EWW
Subjt:  RPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWW

Query:  NVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS
        NVHYKWPYPTEADK+ALAETTGLDPKQINNWFINQRKRHWKPSESMQ+A+MD+V +Q YARLDS
Subjt:  NVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS

XP_004143064.1 homeobox protein knotted-1-like 6 [Cucumis sativus]3.7e-13288.1Show/hide
Query:  TSAISQPQPPS-TTPDFPLP-EDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKY
        TSAISQ +PPS TTPDFP+P ED L++TKAKI+SHPTYPRLL AYIDCQKVGAPPE+ACLLEEIRRENDS +QN ISTCFGADPELDEFMEAYCDMLVKY
Subjt:  TSAISQPQPPS-TTPDFPLP-EDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKY

Query:  KSDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKV
        KSDLSRPFHEA SFLN+IQLQL +L A AST TPSNEDAMSSDDELN GERELQD QMR+EDKGLKDMLLSRFG HIGTLKLEFSKKKKKGKLPKEGRKV
Subjt:  KSDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKV

Query:  LFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS
        L EWW+VHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQ+ NMDN  +QFYARLDS
Subjt:  LFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS

XP_022997562.1 homeobox protein knotted-1-like 6 [Cucurbita maxima]1.1e-13488.64Show/hide
Query:  ISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLS
        +S+ +PPS TPDFPL +D  TL KAKILSHPTYPRLL AYIDC KVGAPPEIACLLEEIRRENDSHKQNAISTCFG DPELDEFME YCDMLVKYKSDLS
Subjt:  ISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLS

Query:  RPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWW
        RPFHEASSFL+ I+LQLS+LCAGASTR+ SNEDAMSSDDELNWGERE+QDAQMR+EDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVL EWW
Subjt:  RPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWW

Query:  NVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS
        NVHYKWPYPTEADK+ALAETTGLDPKQINNWFINQRKRHWKPSESMQ+A+MD+V +Q YARLDS
Subjt:  NVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS

XP_023546842.1 homeobox protein knotted-1-like 6 [Cucurbita pepo subsp. pepo]4.0e-13487.5Show/hide
Query:  ISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLS
        +S+P+PPS TPDFPL +D  ++ KA+ILSHPTYPRLL AYIDC KVGAPPEIACLLEEIRRENDSHKQNA+STCFG DPELDEFME YCDMLVKYKSDLS
Subjt:  ISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLS

Query:  RPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWW
        RPFHEASSFL++I+LQLS+LCAGASTR+ SNEDAMSSDDELNWGERE+QDAQMR+EDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVL EWW
Subjt:  RPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWW

Query:  NVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS
        NVHYKWPYPTEADK+ALAETTGLDPKQINNWFINQRKRHWKPSESMQ+A+MD+V +Q YARLDS
Subjt:  NVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS

XP_038885812.1 homeobox protein knotted-1-like 6 [Benincasa hispida]1.5e-14191.21Show/hide
Query:  LVSTTSAISQPQPPSTTPDFPLPED--ALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDM
        LVS+TSAIS+ + PSTTPDFPLPED   L+LTKAKILSHP YPRLL AYIDCQKVGAPPEIACLLEEIRRENDSHKQN I+TCFGADPELDEFMEAYCDM
Subjt:  LVSTTSAISQPQPPSTTPDFPLPED--ALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDM

Query:  LVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKE
        LVKYKSDLSRPFHEASSFLN+IQLQL +LCAGASTR+PSNEDAMSSDDELNWGERELQD QMR+EDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKE
Subjt:  LVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKE

Query:  GRKVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS
        GRKVL +WWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQ+ NMDNVA+QFYARLDS
Subjt:  GRKVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS

TrEMBL top hitse value%identityAlignment
A0A1S3BA77 homeobox protein knotted-1-like 69.0e-13287.69Show/hide
Query:  TSAISQPQPPSTTPDFPLP-EDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYK
        TS++SQ +PPSTT DF LP ED L++TKAKI+SHP YPRLL AYIDCQKVGAPPEIACLLEEIRRENDSH+QNAISTCFGADPELDEFMEAYCDML+KYK
Subjt:  TSAISQPQPPSTTPDFPLP-EDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYK

Query:  SDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVL
        SDLSRPFHEA SFLN+IQLQL +L AGAST TPSNEDAMSSDDELN GERELQD QMR+EDKGLKDMLLSRFG HIGTLKLEFSKKKKKGKLPKEGRKVL
Subjt:  SDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVL

Query:  FEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS
         EWW+VHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQ+ N+DN A+QF ARLDS
Subjt:  FEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS

A0A6A1V530 Homeobox protein knotted-1-like 63.9e-10369.66Show/hide
Query:  LVSTTSAISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLV
        L+S  SA+S  +  S TP+    ED   + KAKI SHP YPRLLQAYIDCQKVGAPPEIA LL+EIRREND  K++A+STC GADPELDEFME YCD+LV
Subjt:  LVSTTSAISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLV

Query:  KYKSDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGR
        KYKSDL+RPF EA++FLN I+ QLS+LC G+  R+ S+E A+SSD++ + GE E+Q+A++R ED+ LK+ LL RFGSHIGTLKLEFSKKKKKGKLP+E R
Subjt:  KYKSDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGR

Query:  KVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYA
        + L EWW+VHYKWPYPTEADK+ALAE+TGLD KQINNWFINQRKRHWKPSE+MQ+A MDN++ QF+A
Subjt:  KVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYA

A0A6J1BPB0 homeobox protein knotted-1-like 67.6e-12382.05Show/hide
Query:  LVSTTSAISQPQPPSTTPDFPLPEDALTL--TKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDM
        L S  SA+S+ + PS TP FPL  D L++   KAKI+SHPTYPRLL AYIDCQKVGAPPEIA LLEEIRREN   KQ+AISTCFGADPELDEFME YC+M
Subjt:  LVSTTSAISQPQPPSTTPDFPLPEDALTL--TKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDM

Query:  LVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKE
        LVKYKSDLS PF+EASSFLN+I+LQLS LCAGAS R+PSNEDAMSSDDELNWGERELQ AQM +EDK LKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKE
Subjt:  LVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKE

Query:  GRKVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS
        GRKVL EWWNVHYKWPYPTEADK+ALAETTGLDPKQINNWFINQRKRHWKPSESMQ A +DN+ +QF   LDS
Subjt:  GRKVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS

A0A6J1HD67 homeobox protein knotted-1-like 61.7e-13086.42Show/hide
Query:  ISQPQP-PSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDL
        +S  +P  S TPDFPL +D  ++ KAKILSHPTYPRLL AYIDC KVGAPPEIACLLEEIRRENDSHKQNA+STCFG DPELDEFME YCDMLVKYKSDL
Subjt:  ISQPQP-PSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDL

Query:  SRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEW
        SRPF EASSFL++I+LQLS+LCAGASTR+ SNEDAMSSDDELNWGERE+QDAQMR+EDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVL EW
Subjt:  SRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEW

Query:  WNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS
        WNVHYKWPYPTEADK+ALAETTGLDPKQINNWFINQRKRHWKPSESMQ+A+MD+V +Q YARLDS
Subjt:  WNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS

A0A6J1K5E4 homeobox protein knotted-1-like 65.1e-13588.64Show/hide
Query:  ISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLS
        +S+ +PPS TPDFPL +D  TL KAKILSHPTYPRLL AYIDC KVGAPPEIACLLEEIRRENDSHKQNAISTCFG DPELDEFME YCDMLVKYKSDLS
Subjt:  ISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLS

Query:  RPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWW
        RPFHEASSFL+ I+LQLS+LCAGASTR+ SNEDAMSSDDELNWGERE+QDAQMR+EDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVL EWW
Subjt:  RPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWW

Query:  NVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS
        NVHYKWPYPTEADK+ALAETTGLDPKQINNWFINQRKRHWKPSESMQ+A+MD+V +Q YARLDS
Subjt:  NVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDS

SwissProt top hitse value%identityAlignment
A2Y007 Homeobox protein knotted-1-like 101.1e-7053.05Show/hide
Query:  SAISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTC-FGADPELDEFMEAYCDMLVKYKS
        S+   P PP+TT       D   L KA+I  HP+YP LL AYI+C+KVGAPPE+  LLEEI RE       A +    G DPELDEFME YC +L +YK 
Subjt:  SAISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTC-FGADPELDEFMEAYCDMLVKYKS

Query:  DLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAM-SSDDELNWGEREL----QDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEG
        +L+RPF EA+SFL  I  QL+ LC GA   T ++++ + SS+DE   G+ +     Q+   R+ D  LK+MLL ++   +  L+ EF KK+KKGKLPK+ 
Subjt:  DLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAM-SSDDELNWGEREL----QDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEG

Query:  RKVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNV
        R  L +WWN HY+WPYPTE DKV LA  TGLDPKQINNWFINQRKRHWKPSE M++A M+ V
Subjt:  RKVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNV

P46640 Homeobox protein knotted-1-like 25.9e-8863.93Show/hide
Query:  ALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQN-AISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQL
        +L++ K+KI SHP YPRLLQ YIDCQKVGAP EIAC+LEEI+REN  +K++ A  +CFGADPELDEFME YCD+LVKYK+DL+RPF EA++F+N I++QL
Subjt:  ALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQN-AISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQL

Query:  SDLCAGASTRTPSNED-AMSSDDELNWGER-ELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWWNVHYKWPYPTEADKV
         +LC G ++ T  ++D A+SSD+EL   +     D+Q R  D+ LKD LL +FGSHI +LKLEFSKKKKKGKLP+E R+ L +WWNVH KWPYPTE DK+
Subjt:  SDLCAGASTRTPSNED-AMSSDDELNWGER-ELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWWNVHYKWPYPTEADKV

Query:  ALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFY
        +LAE TGLD KQINNWFINQRKRHWKPSE+M +  MD+  + F+
Subjt:  ALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFY

Q7GDL5 Homeobox protein knotted-1-like 101.1e-7053.05Show/hide
Query:  SAISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTC-FGADPELDEFMEAYCDMLVKYKS
        S+   P PP+TT       D   L KA+I  HP+YP LL AYI+C+KVGAPPE+  LLEEI RE       A +    G DPELDEFME YC +L +YK 
Subjt:  SAISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTC-FGADPELDEFMEAYCDMLVKYKS

Query:  DLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAM-SSDDELNWGEREL----QDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEG
        +L+RPF EA+SFL  I  QL+ LC GA   T ++++ + SS+DE   G+ +     Q+   R+ D  LK+MLL ++   +  L+ EF KK+KKGKLPK+ 
Subjt:  DLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAM-SSDDELNWGEREL----QDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEG

Query:  RKVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNV
        R  L +WWN HY+WPYPTE DKV LA  TGLDPKQINNWFINQRKRHWKPSE M++A M+ V
Subjt:  RKVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNV

Q84JS6 Homeobox protein knotted-1-like 62.5e-9463.1Show/hide
Query:  LVSTTSAISQPQPPSTTPDFPLPED--ALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAI-STCFGADPELDEFMEAYCD
        L+S   +    +  S  P+    +D  +LT+ KAKI  HP+YPRLLQAYIDCQKVGAPPEIACLLEEI+RE+D +KQ  + S+CFGADPELDEFME YCD
Subjt:  LVSTTSAISQPQPPSTTPDFPLPED--ALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAI-STCFGADPELDEFMEAYCD

Query:  MLVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGA-STRTPSNEDAMSSDDELNWGEREL-QDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKL
        +LVKYKSDL+RPF EA+ FLN I++QL +LC G  S R  S +  +SSD+EL+ G+ E+ +D + R ED+ LKD LL +FGS I TLKLEFSKKKKKGKL
Subjt:  MLVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGA-STRTPSNEDAMSSDDELNWGEREL-QDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKL

Query:  PKEGRKVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFY
        P+E R+ L +WWN+HYKWPYPTE DK+ALA+ TGLD KQINNWFINQRKRHWKPSE+M +A MD+ +  F+
Subjt:  PKEGRKVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFY

Q9FP29 Homeobox protein knotted-1-like 19.7e-7557.09Show/hide
Query:  DALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQL
        D   L KA+I  HP YP LL AYI+C+KVGAPPE+A LL+EI RE  +      +   G DPELDEFMEAYC +LV+YK +LSRPF EA+SFL+SIQ QL
Subjt:  DALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQL

Query:  SDLCAG-----ASTRTPSNEDAMSSDDELNWGEREL----QDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWWNVHYKWPY
        S+LC+G     A+T T S+E   SSD++   GE ++    Q+   R+ D  LK+MLL ++   +  L+ EF KK+KKGKLPK+ R  L EWWN HY+WPY
Subjt:  SDLCAG-----ASTRTPSNEDAMSSDDELNWGEREL----QDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWWNVHYKWPY

Query:  PTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVA
        PTE DK+ LA  TGLDPKQINNWFINQRKRHWKPS+ M++A M+ VA
Subjt:  PTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVA

Arabidopsis top hitse value%identityAlignment
AT1G23380.1 KNOTTED1-like homeobox gene 61.8e-9563.1Show/hide
Query:  LVSTTSAISQPQPPSTTPDFPLPED--ALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAI-STCFGADPELDEFMEAYCD
        L+S   +    +  S  P+    +D  +LT+ KAKI  HP+YPRLLQAYIDCQKVGAPPEIACLLEEI+RE+D +KQ  + S+CFGADPELDEFME YCD
Subjt:  LVSTTSAISQPQPPSTTPDFPLPED--ALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAI-STCFGADPELDEFMEAYCD

Query:  MLVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGA-STRTPSNEDAMSSDDELNWGEREL-QDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKL
        +LVKYKSDL+RPF EA+ FLN I++QL +LC G  S R  S +  +SSD+EL+ G+ E+ +D + R ED+ LKD LL +FGS I TLKLEFSKKKKKGKL
Subjt:  MLVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGA-STRTPSNEDAMSSDDELNWGEREL-QDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKL

Query:  PKEGRKVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFY
        P+E R+ L +WWN+HYKWPYPTE DK+ALA+ TGLD KQINNWFINQRKRHWKPSE+M +A MD+ +  F+
Subjt:  PKEGRKVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFY

AT1G23380.2 KNOTTED1-like homeobox gene 65.6e-9462.64Show/hide
Query:  LVSTTSAISQPQPPSTTPDFPLPED--ALTLTKAKILSHPTYPRLLQAYIDCQK--VGAPPEIACLLEEIRRENDSHKQNAI-STCFGADPELDEFMEAY
        L+S   +    +  S  P+    +D  +LT+ KAKI  HP+YPRLLQAYIDCQK  VGAPPEIACLLEEI+RE+D +KQ  + S+CFGADPELDEFME Y
Subjt:  LVSTTSAISQPQPPSTTPDFPLPED--ALTLTKAKILSHPTYPRLLQAYIDCQK--VGAPPEIACLLEEIRRENDSHKQNAI-STCFGADPELDEFMEAY

Query:  CDMLVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGA-STRTPSNEDAMSSDDELNWGEREL-QDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKG
        CD+LVKYKSDL+RPF EA+ FLN I++QL +LC G  S R  S +  +SSD+EL+ G+ E+ +D + R ED+ LKD LL +FGS I TLKLEFSKKKKKG
Subjt:  CDMLVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGA-STRTPSNEDAMSSDDELNWGEREL-QDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKG

Query:  KLPKEGRKVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFY
        KLP+E R+ L +WWN+HYKWPYPTE DK+ALA+ TGLD KQINNWFINQRKRHWKPSE+M +A MD+ +  F+
Subjt:  KLPKEGRKVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFY

AT1G62360.1 KNOX/ELK homeobox transcription factor2.1e-6452.05Show/hide
Query:  KAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAIST-CFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQLSDL-C
        KAKI++HP Y RLL AY++CQKVGAPPE+   LEE      +   +   T C G DP LD+FMEAYC+MLVKY+ +LS+PF EA  FL  ++ Q   L  
Subjt:  KAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAIST-CFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQLSDL-C

Query:  AGASTRTPSNEDAM------SSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWWNVHYKWPYPTEADKV
        +  S+ +   E A+      SS++E++    E  D Q   ED+ LK  LL ++  ++G+LK EF KK+KKGKLPKE R+ L +WW+ HYKWPYP+E  K+
Subjt:  AGASTRTPSNEDAM------SSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWWNVHYKWPYPTEADKV

Query:  ALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFY
        ALAE+TGLD KQINNWFINQRKRHWKPSE MQ+  MD      Y
Subjt:  ALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFY

AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 24.2e-8963.93Show/hide
Query:  ALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQN-AISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQL
        +L++ K+KI SHP YPRLLQ YIDCQKVGAP EIAC+LEEI+REN  +K++ A  +CFGADPELDEFME YCD+LVKYK+DL+RPF EA++F+N I++QL
Subjt:  ALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQN-AISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQL

Query:  SDLCAGASTRTPSNED-AMSSDDELNWGER-ELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWWNVHYKWPYPTEADKV
         +LC G ++ T  ++D A+SSD+EL   +     D+Q R  D+ LKD LL +FGSHI +LKLEFSKKKKKGKLP+E R+ L +WWNVH KWPYPTE DK+
Subjt:  SDLCAGASTRTPSNED-AMSSDDELNWGER-ELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWWNVHYKWPYPTEADKV

Query:  ALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFY
        +LAE TGLD KQINNWFINQRKRHWKPSE+M +  MD+  + F+
Subjt:  ALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFY

AT4G08150.1 KNOTTED-like from Arabidopsis thaliana1.3e-6952.02Show/hide
Query:  KAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGA--DPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQLSDLC
        KAKI++HP Y  LLQAY+DCQK+GAPP++   +   R++ ++ +Q +  +   +  DPELD+FMEAYCDMLVKY+ +L+RP  EA  F+  I+ QLS LC
Subjt:  KAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGA--DPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQLSDLC

Query:  AG---ASTRTPSNEDAMSSDDE----LNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWWNVHYKWPYPTEADK
                      D M S DE     + GE EL +   R ED+ LK+ LL ++  ++ +LK E SKKKKKGKLPKE R+ L  WW +HYKWPYP+E++K
Subjt:  AG---ASTRTPSNEDAMSSDDE----LNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWWNVHYKWPYPTEADK

Query:  VALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARL
        VALAE+TGLD KQINNWFINQRKRHWKPSE MQ+  MD +    +A L
Subjt:  VALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTGGTTTCCACTACTTCCGCCATATCCCAACCCCAACCACCTTCCACTACTCCAGATTTCCCACTCCCAGAAGATGCTCTCACCCTCACCAAGGCCAAAATTCT
CTCTCATCCTACCTATCCTCGTTTGCTTCAAGCTTATATTGACTGCCAGAAGGTTGGAGCTCCTCCGGAGATAGCTTGCTTGTTGGAGGAAATCCGGCGAGAAAACGACA
GTCACAAACAAAACGCCATCTCCACGTGCTTTGGAGCCGATCCCGAGCTCGATGAGTTCATGGAAGCGTACTGTGACATGCTGGTGAAGTATAAATCAGATCTCTCGAGG
CCCTTTCATGAAGCTTCTTCCTTCTTGAACAGCATTCAACTGCAACTTAGCGACCTCTGCGCTGGTGCTTCCACCAGAACCCCTTCCAATGAGGATGCTATGTCATCAGA
TGATGAGCTTAACTGGGGAGAGAGGGAATTACAAGATGCTCAAATGAGGGTGGAAGACAAAGGTCTTAAAGATATGCTCTTAAGTAGATTTGGCAGCCACATTGGTACCT
TGAAGCTGGAATTTTCGAAGAAGAAGAAGAAAGGAAAACTACCTAAAGAAGGAAGGAAAGTACTGTTCGAGTGGTGGAATGTTCACTATAAATGGCCATATCCTACGGAA
GCTGATAAGGTTGCGCTGGCAGAGACAACAGGACTAGATCCCAAGCAAATTAACAATTGGTTTATTAATCAACGAAAGCGGCACTGGAAACCTTCTGAAAGTATGCAATA
TGCAAATATGGATAATGTGGCTGATCAATTTTACGCTAGGCTTGACTCTTGTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTTGGTTTCCACTACTTCCGCCATATCCCAACCCCAACCACCTTCCACTACTCCAGATTTCCCACTCCCAGAAGATGCTCTCACCCTCACCAAGGCCAAAATTCT
CTCTCATCCTACCTATCCTCGTTTGCTTCAAGCTTATATTGACTGCCAGAAGGTTGGAGCTCCTCCGGAGATAGCTTGCTTGTTGGAGGAAATCCGGCGAGAAAACGACA
GTCACAAACAAAACGCCATCTCCACGTGCTTTGGAGCCGATCCCGAGCTCGATGAGTTCATGGAAGCGTACTGTGACATGCTGGTGAAGTATAAATCAGATCTCTCGAGG
CCCTTTCATGAAGCTTCTTCCTTCTTGAACAGCATTCAACTGCAACTTAGCGACCTCTGCGCTGGTGCTTCCACCAGAACCCCTTCCAATGAGGATGCTATGTCATCAGA
TGATGAGCTTAACTGGGGAGAGAGGGAATTACAAGATGCTCAAATGAGGGTGGAAGACAAAGGTCTTAAAGATATGCTCTTAAGTAGATTTGGCAGCCACATTGGTACCT
TGAAGCTGGAATTTTCGAAGAAGAAGAAGAAAGGAAAACTACCTAAAGAAGGAAGGAAAGTACTGTTCGAGTGGTGGAATGTTCACTATAAATGGCCATATCCTACGGAA
GCTGATAAGGTTGCGCTGGCAGAGACAACAGGACTAGATCCCAAGCAAATTAACAATTGGTTTATTAATCAACGAAAGCGGCACTGGAAACCTTCTGAAAGTATGCAATA
TGCAAATATGGATAATGTGGCTGATCAATTTTACGCTAGGCTTGACTCTTGTGAATGA
Protein sequenceShow/hide protein sequence
MTLVSTTSAISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSR
PFHEASSFLNSIQLQLSDLCAGASTRTPSNEDAMSSDDELNWGERELQDAQMRVEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWWNVHYKWPYPTE
ADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDSCE