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Clc09G00060 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G00060
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMannose-6-phosphate isomerase
Genome locationClcChr09:63567..65362
RNA-Seq ExpressionClc09G00060
SyntenyClc09G00060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575517.1 hypothetical protein SDJN03_26156, partial [Cucurbita argyrosperma subsp. sororia]7.1e-3770.97Show/hide
Query:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPP---PL--------PPPPSLGDIKEERGRC
        MAKPN  CSIE+EP+TL QGQLHQAREVAADVVQKLEP+E S++ IDIVER KP+N++ E RGE  PLLPP   PL        PPPP +GD  EERGRC
Subjt:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPP---PL--------PPPPSLGDIKEERGRC

Query:  QCSYISAESPNQLQLVKEPLSAPF
        QCSYI  ESPNQLQL+KEPLSAPF
Subjt:  QCSYISAESPNQLQLVKEPLSAPF

XP_022954046.1 uncharacterized protein LOC111456424 [Cucurbita moschata]2.7e-3670.73Show/hide
Query:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPP---PL-------PPPPSLGDIKEERGRCQ
        MAKPN  CSIE+EP+TL QGQLHQAREVAADVVQKLEP+E S++ IDIVER KP+N++ E RGE  PLLPP   PL       PPPP +GD  EE GRCQ
Subjt:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPP---PL-------PPPPSLGDIKEERGRCQ

Query:  CSYISAESPNQLQLVKEPLSAPF
        CSYI  ESPNQLQL+KEPLSAPF
Subjt:  CSYISAESPNQLQLVKEPLSAPF

XP_022992446.1 uncharacterized protein LOC111488747 [Cucurbita maxima]3.4e-3971.54Show/hide
Query:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPP----------PLPPPPSLGDIKEERGRCQ
        MAKPN  CSIE+EP+TLNQGQLHQAREVAADVVQKLEP+E S++ IDIVER KP+N++ E  GE  PLLPP          P PPPP +GD KEERGRCQ
Subjt:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPP----------PLPPPPSLGDIKEERGRCQ

Query:  CSYISAESPNQLQLVKEPLSAPF
        CSYI  ESPNQLQL+KEPLSAPF
Subjt:  CSYISAESPNQLQLVKEPLSAPF

XP_023521779.1 uncharacterized protein LOC111785636 [Cucurbita pepo subsp. pepo]1.7e-3874.59Show/hide
Query:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPP---PL------PPPPSLGDIKEERGRCQC
        MAKPN  CSIE+EP+TLNQGQLHQAREVAADVVQKLEP+E S++ IDIVER KP+N+M E RGE  PLLPP   PL      P PP +GD KEERGRCQC
Subjt:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPP---PL------PPPPSLGDIKEERGRCQC

Query:  SYISAESPNQLQLVKEPLSAPF
        SYIS ESPNQLQL+KEPLSAPF
Subjt:  SYISAESPNQLQLVKEPLSAPF

XP_038898732.1 uncharacterized protein LOC120086256 [Benincasa hispida]2.4e-4584.96Show/hide
Query:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPPPLPPPPSLGDIKEERGRCQCSYISAESPN
        MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSE S+V IDIVERFK +NYM E  G+ QP LPPP P  PSLGDIKEERGRCQC Y+S ESPN
Subjt:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPPPLPPPPSLGDIKEERGRCQCSYISAESPN

Query:  QLQLVKEPLSAPF
        QLQLVKEPLSAPF
Subjt:  QLQLVKEPLSAPF

TrEMBL top hitse value%identityAlignment
A0A0A0K9S8 Uncharacterized protein1.4e-2763.48Show/hide
Query:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPPPLPPPPSLGDIKEERGRCQCSYISA-ESP
        MAKPNVCCSIELEPKTLNQGQLH+AREVAADVVQKLE SE ++V ID+VER +P+  MF   G              SL + +EER RCQCSY+S  +SP
Subjt:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPPPLPPPPSLGDIKEERGRCQCSYISA-ESP

Query:  NQ-LQLVKEPLSAPF
        N+ L+L+KEPLSAPF
Subjt:  NQ-LQLVKEPLSAPF

A0A1S3CH00 uncharacterized protein LOC1035007903.9e-3371.3Show/hide
Query:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPPPLPPPPSLGDIKEERGRCQCSYISA-ESP
        MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSE S+V ID+VER KP+ YMFER G              SLG+ +EER RCQCSY+S  +SP
Subjt:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPPPLPPPPSLGDIKEERGRCQCSYISA-ESP

Query:  NQ-LQLVKEPLSAPF
        N+ LQL+KEPLSAPF
Subjt:  NQ-LQLVKEPLSAPF

A0A6J1DD75 uncharacterized protein LOC1110199606.5e-2862.83Show/hide
Query:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPPPLPPPPSLGDIKEERGRCQCSYISAESPN
        MAK  +CCSIELEPKTLN GQL++AREVAADVVQKLEP E S V ID+VERFK +N   E  GEP             L D  E R RCQCS +  ESPN
Subjt:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPPPLPPPPSLGDIKEERGRCQCSYISAESPN

Query:  QLQLVKEPLSAPF
        Q+QL+KEPLSAPF
Subjt:  QLQLVKEPLSAPF

A0A6J1GPS6 uncharacterized protein LOC1114564241.3e-3670.73Show/hide
Query:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPP---PL-------PPPPSLGDIKEERGRCQ
        MAKPN  CSIE+EP+TL QGQLHQAREVAADVVQKLEP+E S++ IDIVER KP+N++ E RGE  PLLPP   PL       PPPP +GD  EE GRCQ
Subjt:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPP---PL-------PPPPSLGDIKEERGRCQ

Query:  CSYISAESPNQLQLVKEPLSAPF
        CSYI  ESPNQLQL+KEPLSAPF
Subjt:  CSYISAESPNQLQLVKEPLSAPF

A0A6J1JTK7 uncharacterized protein LOC1114887471.6e-3971.54Show/hide
Query:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPP----------PLPPPPSLGDIKEERGRCQ
        MAKPN  CSIE+EP+TLNQGQLHQAREVAADVVQKLEP+E S++ IDIVER KP+N++ E  GE  PLLPP          P PPPP +GD KEERGRCQ
Subjt:  MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPP----------PLPPPPSLGDIKEERGRCQ

Query:  CSYISAESPNQLQLVKEPLSAPF
        CSYI  ESPNQLQL+KEPLSAPF
Subjt:  CSYISAESPNQLQLVKEPLSAPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGCCTAATGTTTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGTCAACTCCACCAGGCTAGGGAAGTGGCTGCTGATGTTGTTCAGAAACTGGA
ACCCAGTGAAACCTCTATTGTATCGATTGATATCGTGGAAAGATTCAAACCGATCAACTATATGTTTGAAAGAAGAGGAGAACCACAACCATTATTGCCACCGCCGCTAC
CACCACCACCGTCATTAGGAGATATTAAGGAAGAAAGAGGAAGATGTCAGTGCTCTTACATTTCTGCTGAATCCCCAAATCAACTGCAGTTGGTCAAGGAACCCCTTTCA
GCTCCATTTTGA
mRNA sequenceShow/hide mRNA sequence
CGCAGAGGCTAAATTTAGTGCAGTAGCAAATATTTAATGGGCTGCTGCTGCTGCTGTTGCAAAGTTTCTAGCTTTTCATCTTTGGCTTATAGTTATGGCTAAGCCTAATG
TTTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGTCAACTCCACCAGGCTAGGGAAGTGGCTGCTGATGTTGTTCAGAAACTGGAACCCAGTGAAACCTCT
ATTGTATCGATTGATATCGTGGAAAGATTCAAACCGATCAACTATATGTTTGAAAGAAGAGGAGAACCACAACCATTATTGCCACCGCCGCTACCACCACCACCGTCATT
AGGAGATATTAAGGAAGAAAGAGGAAGATGTCAGTGCTCTTACATTTCTGCTGAATCCCCAAATCAACTGCAGTTGGTCAAGGAACCCCTTTCAGCTCCATTTTGAAGCT
TTTACCCTTCTTTAGATCTCAAGTAGTTTGTAGAGTTTAAAGACAAATACTTTTGTTTTTTTGAAGTATTTGGACTATCAATTTATGTAAGTTGTAATGGATAATTCTCA
GTTTATTAAACTATTACTGATGACACAAACAATGCCATGTGTAACCAAAATGAGTTTCCATGATGCAAGAGCTTAGTTCAAATTAAATGGTTTTAGAGAAAAGTGTCATA
AAATTAAAAAGTGTGGTTTTTAATAGAAAAAAAAGTAAAATTTTTATATATTTAAGACCTAATTTGG
Protein sequenceShow/hide protein sequence
MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSETSIVSIDIVERFKPINYMFERRGEPQPLLPPPLPPPPSLGDIKEERGRCQCSYISAESPNQLQLVKEPLS
APF