; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G00250 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G00250
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProfilin
Genome locationClcChr09:239752..241219
RNA-Seq ExpressionClc09G00250
SyntenyClc09G00250
Gene Ontology termsGO:0042989 - sequestering of actin monomers (biological process)
GO:0005856 - cytoskeleton (cellular component)
GO:0005938 - cell cortex (cellular component)
GO:0003785 - actin monomer binding (molecular function)
InterPro domainsIPR005455 - Profilin
IPR027310 - Profilin conserved site
IPR036140 - Profilin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593495.1 hypothetical protein SDJN03_12971, partial [Cucurbita argyrosperma subsp. sororia]2.1e-6491.6Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMC+IEGNHLTSAAIIGHD SVWAQS+SFPQFK EEI+A+MKD DEPGSLAPTGLHL GTKYMVIQGEPG+VVRGKKGAGGITVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        VIIGIYDEP+TPGQCNMVVERLGDYLIEQ L
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

XP_022150558.1 profilin-3 [Momordica charantia]1.4e-6595.42Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFP FK +EISAIMKDLDEPGSLA TGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        +IIGIYDEPLTPGQCNMVVERLGDYLIEQ L
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

XP_022953195.1 profilin-3 [Cucurbita moschata]4.9e-6693.13Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQS+SFPQFK EEISAIMKD DEPGSLAPTGLHLGGTKYMVIQGEPG+VVRGKKGAGG+TVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        +I+GIYDEP+TPGQCNMVVERLGDYLIEQ L
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

XP_022964432.1 profilin-3-like [Cucurbita moschata]9.3e-6592.37Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMCEIEGNHLTSAAIIGHD SVWAQS+SFPQFK EEI+A+MKD DEPGSLAPTGLHL GTKYMVIQGEPG+VVRGKKGAGGITVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        VIIGIYDEP+TPGQCNMVVERLGDYLIEQ L
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

XP_038899187.1 profilin-3 [Benincasa hispida]6.5e-6694.66Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMC+IEGNHLTSAAIIGHD SVWAQSSSFPQFKA EISAIMKD DEPGSLAPTGLHLGGTKYMVIQGEPG+VVRGKKGAGGITVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        VIIGIYDEP+TPGQCNMVVERLGDYLIEQ L
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

TrEMBL top hitse value%identityAlignment
A0A6J1D9R4 Profilin7.0e-6695.42Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFP FK +EISAIMKDLDEPGSLA TGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        +IIGIYDEPLTPGQCNMVVERLGDYLIEQ L
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

A0A6J1GNZ3 Profilin2.4e-6693.13Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQS+SFPQFK EEISAIMKD DEPGSLAPTGLHLGGTKYMVIQGEPG+VVRGKKGAGG+TVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        +I+GIYDEP+TPGQCNMVVERLGDYLIEQ L
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

A0A6J1HHT1 Profilin4.5e-6592.37Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMCEIEGNHLTSAAIIGHD SVWAQS+SFPQFK EEI+A+MKD DEPGSLAPTGLHL GTKYMVIQGEPG+VVRGKKGAGGITVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        VIIGIYDEP+TPGQCNMVVERLGDYLIEQ L
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

A0A6J1JVP5 Profilin2.4e-6693.13Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQS+SFPQFK EEISAIMKD DEPGSLAPTGLHLGGTKYMVIQGEPG+VVRGKKGAGG+TVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        +I+GIYDEP+TPGQCNMVVERLGDYLIEQ L
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

A0A6J1KMJ4 Profilin2.2e-6491.6Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMC+IEGNHL+SAAIIGHD SVWAQS+SFPQFK EEI+AIMKD DEPGSLAPTGLHL GTKYMVIQGEPG+VVRGKKGAGGITVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        VIIGIYDEP+TPGQCNMVVERLGDYLIEQ L
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

SwissProt top hitse value%identityAlignment
A4GFC2 Profilin-44.8e-6483.97Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMC+IEG HLT+AA+IGHDGSVWAQS++FPQFK EE++AI+KD DEPGSLAPTGLHLGGTKYMVIQGEPG+V+RGKKGAGGITVKKT +A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        +I GIYDEPLTPGQCN++VERLGDYL+EQ L
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

Q9LEI8 Profilin-63.7e-6483.97Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMC+I+G+ LT+AAIIGHDGSVWAQSSSFPQFK++E++A+MKD DEPGSLAPTGLHLGGTKYMVIQGEPG+V+RGKKG+GGITVKKT +A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        +IIGIYDEPLTPGQCNM+VERLGDYL++Q L
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

Q9M7M8 Profilin-58.2e-6483.21Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMC+I+G+ LT+AAIIGHDGSVWAQSS FPQFK++E++A+MKD DEPGSLAPTGLHLGGTKYMVIQGEPG+V+RGKKG+GGITVKKT +A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        +IIGIYDEPLTPGQCNM+VERLGDYL+EQ +
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

Q9M7M9 Profilin-46.3e-6483.97Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMC+I+G+ LT+AAIIGHDGSVWAQSSSFPQFK++E++AIMKD DEPGSLAPTGLHLG TKYMVIQGEPG+V+RGKKG+GGITVKKT +A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        +IIGIYDEPLTPGQCNM+VERLGDYL+EQ +
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

Q9M7N0 Profilin-35.7e-6585.5Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVD+HLMC+I+G+HLT+AAIIGHDGSVWAQSSSFPQFK EE++AIMKD DEPGSLAPTGLHLGGTKYMVIQGEPG+V+RGKKG+GGITVKKT +A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        +IIGIYDEPLTPGQCNM+VERLGDYL+EQ +
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

Arabidopsis top hitse value%identityAlignment
AT2G19760.1 profilin 16.5e-5672.52Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQ+YVDDHLMC++EGNHLT+AAI+G DGSVWAQS+ FPQ K +EI  I KD +EPG LAPTGL LGG KYMVIQGE G+V+RGKKG GG+T+KKT +A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        ++ G YDEP+T GQCN+VVERLGDYLIE  L
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

AT2G19770.1 profilin 54.5e-5773.13Show/hide
Query:  MSWQTYVDDHLMCEI---EGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKT
        MSWQ YVD+HLMC++   +G+HLT+AAIIGHDGSVWAQS++FPQFK +EI+ IMKD DEPG LAPTG+ L G KYMVIQGEP +V+RGKKGAGGIT+KKT
Subjt:  MSWQTYVDDHLMCEI---EGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKT

Query:  EKAVIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
         ++++ G+Y+EP+TPGQCNMVVERLGDYLIEQ L
Subjt:  EKAVIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

AT4G29340.1 profilin 44.0e-5873.88Show/hide
Query:  MSWQTYVDDHLMCEI---EGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKT
        MSWQTYVD+HLMC++   +G+HLT+AAI+GHDGSVWAQS++FPQFK +E S IMKD DEPG LAPTGL + G KYMVIQGEPG+V+RGKKGAGGIT+KKT
Subjt:  MSWQTYVDDHLMCEI---EGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKT

Query:  EKAVIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
         ++ + GIY+EP+TPGQCNMVVERLGDYL+EQ L
Subjt:  EKAVIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

AT4G29350.1 profilin 21.9e-5573.28Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQ+YVDDHLMCE+EGNHLT AAI G DGSVWAQSS+FPQ K  EI+ I KD +E G LAPTGL LGG KYMV+QGE G+V+RGKKG GG+T+KKT +A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        ++ GIYDEP+T GQCN+VVERLGDYLIE  L
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

AT5G56600.1 profilin 34.2e-5572.52Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMC++ GN LT+AAI+G DGSVWAQS++FPQ K EEI  I  D   PG+LAPTGL LGG KYMVIQGEP +V+RGKKGAGG+T+KKT  A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL
        ++ GIYDEP+TPGQCNMVVE LG+YLIE  L
Subjt:  VIIGIYDEPLTPGQCNMVVERLGDYLIEQAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTGGCAAACGTACGTGGACGATCACCTGATGTGTGAGATTGAAGGAAACCATCTGACCTCCGCCGCAATCATCGGACACGACGGCAGTGTTTGGGCGCAGAGCTC
CTCATTCCCTCAGTTTAAGGCGGAGGAGATATCGGCGATTATGAAGGATTTGGATGAGCCAGGTTCTCTTGCACCAACTGGATTACACCTGGGAGGCACTAAATACATGG
TCATCCAAGGAGAGCCTGGATCCGTTGTTCGTGGCAAAAAGGGTGCTGGGGGAATCACTGTGAAGAAAACTGAGAAGGCTGTCATAATTGGGATTTATGATGAACCTTTG
ACTCCTGGACAATGCAATATGGTGGTTGAAAGGTTGGGAGATTACCTCATCGAACAGGCTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGTGGCAAACGTACGTGGACGATCACCTGATGTGTGAGATTGAAGGAAACCATCTGACCTCCGCCGCAATCATCGGACACGACGGCAGTGTTTGGGCGCAGAGCTC
CTCATTCCCTCAGTTTAAGGCGGAGGAGATATCGGCGATTATGAAGGATTTGGATGAGCCAGGTTCTCTTGCACCAACTGGATTACACCTGGGAGGCACTAAATACATGG
TCATCCAAGGAGAGCCTGGATCCGTTGTTCGTGGCAAAAAGGGTGCTGGGGGAATCACTGTGAAGAAAACTGAGAAGGCTGTCATAATTGGGATTTATGATGAACCTTTG
ACTCCTGGACAATGCAATATGGTGGTTGAAAGGTTGGGAGATTACCTCATCGAACAGGCTTTGTAG
Protein sequenceShow/hide protein sequence
MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPL
TPGQCNMVVERLGDYLIEQAL