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Clc09G00730 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G00730
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTransmembrane protein, putative
Genome locationClcChr09:573537..579749
RNA-Seq ExpressionClc09G00730
SyntenyClc09G00730
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34112.1 hypothetical protein [Cucumis melo subsp. melo]1.3e-1995.45Show/hide
Query:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
        MA+KPTVALRAVLVGGIAAFAK+AGAMKAAGGAKLGAATAAMTAAATAALAG+KQDQKDDSKHSPK
Subjt:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
KAA0059427.1 hypothetical protein E6C27_scaffold242G001540 [Cucumis melo var. makuwa]7.7e-2096.97Show/hide
Query:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
        MA+KPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAG+KQDQKDDSKHSPK
Subjt:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
KAE8646513.1 hypothetical protein Csa_016818 [Cucumis sativus]7.7e-2096.97Show/hide
Query:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
        MA+KPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAG+KQDQKDDSKHSPK
Subjt:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
KAG6575471.1 hypothetical protein SDJN03_26110, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2194.44Show/hide
Query:  KPKTKNMAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
        KPK  NMAIKPTVALRAVLVGGIAAFAKIAGAMKAAGG KLGAATAAMTAAATAALAGSKQDQKDDSKH PK
Subjt:  KPKTKNMAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
KAG7014012.1 hypothetical protein SDJN02_24183, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-2283.72Show/hide
Query:  CVQKKETVLLLD--KPKTKNMAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
        C  K  TV   +  KPK  NMAIKPTVALRAVLVGGIAAFAKIAGAMKAAGG KLGAATAAMTAAATAALAGSKQDQKDDSKH PK
Subjt:  CVQKKETVLLLD--KPKTKNMAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
TrEMBL top hitse value%identityAlignment
A0A5A7UXR8 Uncharacterized protein3.7e-2096.97Show/hide
Query:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
        MA+KPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAG+KQDQKDDSKHSPK
Subjt:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
A0A6J1CPT9 uncharacterized protein LOC1110136202.4e-1995.45Show/hide
Query:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
        M +KPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKH PK
Subjt:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
A0A6J1GSG6 uncharacterized protein LOC1114565691.4e-1996.97Show/hide
Query:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
        MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGG KLGAATAAMTAAATAALAGSKQDQKDDSKH PK
Subjt:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
A0A6J1JXL7 uncharacterized protein LOC1114887601.8e-1995.45Show/hide
Query:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
        MA+KPTVALRAVLVGGIAAFAKIAGAMKAAGG KLGAATAAMTAAATAALAGSKQDQKDDSKH PK
Subjt:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
E5GCB3 Uncharacterized protein6.3e-2095.45Show/hide
Query:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
        MA+KPTVALRAVLVGGIAAFAK+AGAMKAAGGAKLGAATAAMTAAATAALAG+KQDQKDDSKHSPK
Subjt:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13845.1 unknown protein3.0e-1469.7Show/hide
Query:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALA-GSKQDQKDDSKHSP
        M++KPTVALR +LVGG+A FAK+A AMKAAGG KLGAA  AMT AATAA++ GSKQDQK D+  +P
Subjt:  MAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALA-GSKQDQKDDSKHSP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTATTGAGAGAGCGGGTGCGGCTGCGGCGGGGATGGGGGAAGCGGATTTTGTTCTTTGCTTTTGCTTATTTTTCGAAAATCTTTTTGGGGAAAATTTTGGAGG
GGATTTGGTTCTCACCTCAGGTCTTCTTATTACCATTCCCTTTCTAATCTTTCTTTCCTGTTTCCCTTTCCAATCCAATCTCGATTTCCCTTTCTCTATTTCCACTTGCT
CCTGTTCTGATCTTGCTTTCAATCCACCTTCTTCGCTCCAGCGGATTAACGTAATTTTGAGGGGTGGCGTCCAACTGAAGGGAATATATTGTGTGCAAAAAAAAGAAACG
GTTCTTCTATTAGATAAACCCAAAACCAAAAACATGGCAATAAAACCAACTGTTGCCTTGCGGGCTGTACTTGTTGGAGGAATTGCAGCGTTTGCTAAAATTGCTGGTGC
AATGAAAGCTGCTGGTGGTGCAAAGTTAGGTGCGGCCACAGCTGCCATGACAGCAGCAGCAACTGCAGCTTTGGCAGGATCAAAACAAGACCAGAAGGATGATTCTAAAC
ACTCTCCAAAATGA
mRNA sequenceShow/hide mRNA sequence
AGGTGGATTTGGAGAAGTGTTGGTGGTGATTGATGGGGCTCATTTGAGGGTTAAGGATGAGATTTGTTGTTGAAGATGGAAGGTATTGAGAGAGCGGGTGCGGCTGCGGC
GGGGATGGGGGAAGCGGATTTTGTTCTTTGCTTTTGCTTATTTTTCGAAAATCTTTTTGGGGAAAATTTTGGAGGGGATTTGGTTCTCACCTCAGGTCTTCTTATTACCA
TTCCCTTTCTAATCTTTCTTTCCTGTTTCCCTTTCCAATCCAATCTCGATTTCCCTTTCTCTATTTCCACTTGCTCCTGTTCTGATCTTGCTTTCAATCCACCTTCTTCG
CTCCAGCGGATTAACGTAATTTTGAGGGGTGGCGTCCAACTGAAGGGAATATATTGTGTGCAAAAAAAAGAAACGGTTCTTCTATTAGATAAACCCAAAACCAAAAACAT
GGCAATAAAACCAACTGTTGCCTTGCGGGCTGTACTTGTTGGAGGAATTGCAGCGTTTGCTAAAATTGCTGGTGCAATGAAAGCTGCTGGTGGTGCAAAGTTAGGTGCGG
CCACAGCTGCCATGACAGCAGCAGCAACTGCAGCTTTGGCAGGATCAAAACAAGACCAGAAGGATGATTCTAAACACTCTCCAAAATGA
Protein sequenceShow/hide protein sequence
MEGIERAGAAAAGMGEADFVLCFCLFFENLFGENFGGDLVLTSGLLITIPFLIFLSCFPFQSNLDFPFSISTCSCSDLAFNPPSSLQRINVILRGGVQLKGIYCVQKKET
VLLLDKPKTKNMAIKPTVALRAVLVGGIAAFAKIAGAMKAAGGAKLGAATAAMTAAATAALAGSKQDQKDDSKHSPK