CuGenDBv2

Gene ID	Clc09G00980
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	40S ribosomal S3-like protein
Genome location	ClcChr09:786890..794478
RNA-Seq Expression	Clc09G00980
Synteny	Clc09G00980
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005634 - nucleus (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001351 - Ribosomal protein S3, C-terminal IPR004044 - K Homology domain, type 2 IPR005703 - Ribosomal protein S3, eukaryotic/archaeal IPR009019 - K homology domain superfamily, prokaryotic type IPR015946 - K homology domain-like, alpha/beta IPR018280 - Ribosomal protein S3, conserved site IPR036419 - Ribosomal protein S3, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8646506.1 hypothetical protein Csa_015876 [Cucumis sativus]

7.7e-130

86.81

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIEPILSS-----------------PNFGFTNSSAHEEWRNDKHLLSQLGVHLVLCLCI
        PTPLPDLVTIH+PKEEEDF+RPVAVIPTTEIE ++++                 PNF FT+    +  R   HL SQLG+HLVLCLCI
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIEPILSS-----------------PNFGFTNSSAHEEWRNDKHLLSQLGVHLVLCLCI

KAG6593545.1 40S ribosomal protein S3-3, partial [Cucurbita argyrosperma subsp. sororia]

1.5e-125

88.28

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE--PILSSPNFGFTNSSAHEEWRNDKHLLSQLGVHLVLCLCI
        PTPLPDLVTIHTPKEEE+F+RP AVIPT EIE   +L  P     ++       +  H LS L  HL+LCLCI
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE--PILSSPNFGFTNSSAHEEWRNDKHLLSQLGVHLVLCLCI

XP_004141698.1 40S ribosomal protein S3-3 [Cucumis sativus]

7.0e-123

99.14

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE
        PTPLPDLVTIH+PKEEEDF+RPVAVIPTTEIE
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE

XP_022953609.1 40S ribosomal protein S3-3-like [Cucurbita moschata]

9.1e-123

99.14

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE
        PTPLPDLVTIHTPKEEEDF+RPVAVIPT EIE
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE

XP_023547512.1 40S ribosomal protein S3-3-like [Cucurbita pepo subsp. pepo]

2.7e-122

98.71

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE
        PTPLPDLVTIHTPKEEEDF+RP AVIPT EIE
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCL9 Uncharacterized protein

1.1e-129

85.91

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIEPILSS-----------------PNFGFTNSSAHEEWRND---KHLLSQLGVHLVLCLCI
        PTPLPDLVTIH+PKEEEDF+RPVAVIPTTEIE ++++                 PNF FT+         D    HL SQLG+HLVLCLCI
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIEPILSS-----------------PNFGFTNSSAHEEWRND---KHLLSQLGVHLVLCLCI

A0A6J1D813 40S ribosomal protein S3-3

1.3e-122

98.71

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE
        PTPLPDLVTIHTPKEEE+F+RPVAVIPT EIE
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE

A0A6J1GQ60 40S ribosomal protein S3-3-like

4.4e-123

99.14

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE
        PTPLPDLVTIHTPKEEEDF+RPVAVIPT EIE
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE

A0A6J1JPM9 40S ribosomal protein S3-3-like

2.9e-122

98.71

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP NSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE
        PTPLPDLVTIHTPKEEEDF+RPVAVIPT EIE
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE

A0A6J1KD29 40S ribosomal protein S3-3 isoform X1

6.4e-122

98.28

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE
        PTPLPDLVTIH PKEEE+F+RPVAVIPT EIE
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIE

SwissProt top hits

e value

%identity

Alignment

P02350 40S ribosomal protein S3-A

3.1e-97

80.95

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEI
          PLPD V+I  PK+E        ++PTT I
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEI

P47835 40S ribosomal protein S3-B

3.1e-97

80.95

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MA QMSKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEI
          PLPD V+I  PK+E        ++PTT I
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEI

Q9FJA6 40S ribosomal protein S3-3

5.8e-112

87.55

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIEP
         TPLPD+V IHTPKE++ ++ P  V+      P
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIEP

Q9M339 40S ribosomal protein S3-2

3.2e-110

90.22

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAV
         TPLPD+V IH+PKEEE    P  V
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAV

Q9SIP7 40S ribosomal protein S3-1

3.5e-109

87.12

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPV-AVIPTTEIE
         TPLPD+V IH PK++  +  P  A  P T ++
Subjt:  PTPLPDLVTIHTPKEEEDFVRPV-AVIPTTEIE

Arabidopsis top hits

e value

%identity

Alignment

AT2G31610.1 Ribosomal protein S3 family protein

2.5e-110

87.12

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPV-AVIPTTEIE
         TPLPD+V IH PK++  +  P  A  P T ++
Subjt:  PTPLPDLVTIHTPKEEEDFVRPV-AVIPTTEIE

AT3G53870.1 Ribosomal protein S3 family protein

2.2e-111

90.22

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Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAV
         TPLPD+V IH+PKEEE    P  V
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAV

AT5G35530.1 Ribosomal protein S3 family protein

4.1e-113

87.55

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Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIEP
         TPLPD+V IHTPKE++ ++ P  V+      P
Subjt:  PTPLPDLVTIHTPKEEEDFVRPVAVIPTTEIEP

Sequences

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CDS sequence

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ATGGCTACTCAGATGAGCAAAAAGCGAAAGTTTGTGGCTGATGGAGTGTTCTTCGCGGAGCTTAACGAAGTTCTTACCAGAGAGCTTGCAGAGGATGGATACTCCGGAGT
GGAGGTTAGGGTTACACCTATGCGGACTGAGATTATCATTCGGGCTACTCGCACACAGAATGTTCTTGGTGAGAAAGGAAGGAGAATTAGAGAATTGACATCTGTTGTTC
AGAAGCGTTTCAAGTTTCCTGAAAACAGTGTTGAGCTTTATGCTGAAAAGGTCAACAACAGAGGACTCTGTGCCATTGCTCAAGCTGAGTCTCTTCGTTACAAGCTTCTA
GGAGGCCTTGCTGTGAGAAGGGCTTGCTATGGTGTCCTTAGATTTGTCATGGAGAGTGGAGCTAAAGGATGTGAGGTTATTGTTAGTGGTAAGCTGAGGGCTCAGCGTGC
AAAATCCATGAAATTCAAGGATGGTTACATGATATCGTCTGGACAGCCAGTGAAAGAGTACATAGACTCTGCCGTGAGGCACGTTCTCCTTAGACAGGGTGTTTTGGGTA
TCAAGGTCAAGATCATGCTTGATTGGGACCCTAAGGGTAAGCAAGGTCCACCGACGCCTCTCCCTGATTTGGTTACCATCCATACTCCCAAGGAGGAAGAGGATTTCGTT
AGGCCCGTGGCTGTGATTCCGACAACTGAAATTGAACCCATATTGAGTAGCCCAAATTTCGGATTTACAAATTCATCGGCACACGAAGAATGGCGAAACGATAAGCACTT
GCTGAGTCAACTCGGCGTTCACCTGGTTCTATGTTTATGTATTTGA

mRNA sequence

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ATTCTCAGCATTTCCTAGGGTTTTCTTCCATCTTCAACCTAGAGTACACGCAGAACAGCTGTGAACGGCGACACCACCACCAACCAGTCATGGCTACTCAGATGAGCAAA
AAGCGAAAGTTTGTGGCTGATGGAGTGTTCTTCGCGGAGCTTAACGAAGTTCTTACCAGAGAGCTTGCAGAGGATGGATACTCCGGAGTGGAGGTTAGGGTTACACCTAT
GCGGACTGAGATTATCATTCGGGCTACTCGCACACAGAATGTTCTTGGTGAGAAAGGAAGGAGAATTAGAGAATTGACATCTGTTGTTCAGAAGCGTTTCAAGTTTCCTG
AAAACAGTGTTGAGCTTTATGCTGAAAAGGTCAACAACAGAGGACTCTGTGCCATTGCTCAAGCTGAGTCTCTTCGTTACAAGCTTCTAGGAGGCCTTGCTGTGAGAAGG
GCTTGCTATGGTGTCCTTAGATTTGTCATGGAGAGTGGAGCTAAAGGATGTGAGGTTATTGTTAGTGGTAAGCTGAGGGCTCAGCGTGCAAAATCCATGAAATTCAAGGA
TGGTTACATGATATCGTCTGGACAGCCAGTGAAAGAGTACATAGACTCTGCCGTGAGGCACGTTCTCCTTAGACAGGGTGTTTTGGGTATCAAGGTCAAGATCATGCTTG
ATTGGGACCCTAAGGGTAAGCAAGGTCCACCGACGCCTCTCCCTGATTTGGTTACCATCCATACTCCCAAGGAGGAAGAGGATTTCGTTAGGCCCGTGGCTGTGATTCCG
ACAACTGAAATTGAACCCATATTGAGTAGCCCAAATTTCGGATTTACAAATTCATCGGCACACGAAGAATGGCGAAACGATAAGCACTTGCTGAGTCAACTCGGCGTTCA
CCTGGTTCTATGTTTATGTATTTGAGTTGCATGTGGTGGATTTTCCATGGAAACAGTGGTTGGATTTGTGGAGAATGAAGGGAAGATTATCGAAAGCAGGGCTGCTGAGG
ATGGCTCCACTCTGTCCCCAAATCAGATTGCCGACCCAGTTGTGTACAAACTTGTCAGGGTTAAAGATACCATCGTACTCATAGAGATGTCAATTGATGAAGCAGATATA
TGTGGAAGAAATGCAATGCGATCTTTTCATCGGTTGATGGTGATGGCAGATTCGTTCCTGCCACAGATGATGAAGTAATGGAGGTTGAGGATTTACTTGAAGACGGCAAA
AATGAAAAAGTGGAAGATGCAGAACGAATTGTAGGATGCATACCCACTGAAGGCACTTTATTTGGGAAGCCTCATGTAGAAATCTCAAATGATATGCCAGGTTTACCACA
ATCTGAAACCTTTGAAGCTGCTGGAGAATATAATGCCCGATTGGAGTACATTGAGGATGTATTGCAAAAGGTGAAACAGGAAGAGAGGCTTCGCTTAACATGTGGATTGC
CTAACTATGCTTCTGCTTACGTGAATAGAGACAGGAAGAGTTTTGACGAGCATGGTAGATTGCCTGTTATTGATGAAAAGCTTCAATCCAATCTTTCTCTGCAGGAAATA
ACTCACTCAATTTCTCCTAGTTTAAATGAGAATCATGTGAGTAAACATGGGAGTCTGGGCGATTGTTTAAAGCATCCAGATAATTCGGTGGAATTCGAATCCTCAGATGC
CCTCTGCACTACGTCTAACCCTGATTTTTCCCTGTTGAAGGGCGATGTATGCCTGGATAATCTGTCAATTAGAGAACTCCATGAATGTTTCAAAGCAGCTTTTGGGAGAG
ACACTACGGTTAAAGACAAATCATGGCTTAAGAGGAGAATTGCCATGGGATTGACCAACTCATGTGACATTCCAGCCTCATCTTTTATAATTAAGGAAGGCAACTTTGTT
GAAGAAAGTTCTCAAAAGGTGGAGGGCATGTCCAATGTTCAAACGACCGATGCTTTGAAAATTGAATGCAGAGGTTCACCAACAACTTACAGTTTGGAAGACAAGGACCG
CCATCACTTTGAGGATATGGAACTTGATCATGGAAGTGAAGGTCAGCATGATGAGAGAGCCGCTGTTAAAAGAATTCGGAAGCCTACCAGGCGGTATATTGAAGAACTTT
CTGAAGTAGAGTCAAGAGAGTATGTCCAAAAAGTGATTAGTTTGAATAAAAATACTATATCAGATGGCGTATCTACGAATTCCATTGCAAGACCTATTAAGAAAGTATAT
TCAGATGGGGGAAGAACTGTCATTACAAGATTGGATTCACTTGGTGGATCTGGCTTTCAGGTCCCATGTGTTTCTAGAGTTCGAAGGAGCCGTCCGAGGAAAGACGTTGT
AGCCCTTGTGTTCGCCCTTCCAGACAAAGACCAGAATCCTTCAGTTGCAGTCACAGACGAAGCAGAGAAGAATTTGGAGCAGAAGCAAACAGTTTCTGGCAATGCATCGG
ATGATAACACGTCGGTTGTTCCAACATCAAAAGGTGGAGTGAGGAGAAAGCATCATCGTGCTTGGACTCTTGTTGAGGTCATCAAATTAGTAGAGGGTGTGTCGAAATGC
GGTGCTGGGAGGTGGTCTGAGATTAAGAAACTATCATTTTCATCATACTCATACCGTACATCAGTTGATCTCAAGGTTTCTCTTTTGATAGGATAAATGGAGAAACCTGC
TTAAAGCTAGCTTCGCGCAGACACCTGTTGATGAAGGGATAAGTGCTCGGAAACATGCATCAATATCGATTCCTGCACAAATCTTGTTACGGGTGAGGGAGCTTGCTGAG
ATGCATGCTCAAATTCCTCCTTCAAATCATGGCCAAGGCAAGCTGGGTGGTGGAGTTACTGGGAGTATGCATGAGATGAGTTCTTCGGCAGTATGCTTGTGACATTGTAA
ATAATACAAACTTATCTTATTTTTCCCCCTTCAAAAAGTAATCGAAAAAAAAAAAAAAAACAAGAAAAAAAGAAATTACTGATCCGAATGCAGCAACAAATGTTTGTTGT
TTGTTGCTGGTGACGAGAATTGTAGGAATTTCTTAAGCTTTGCTTAGTCATAAAAATCCTTGTTAACCGC

Protein sequence

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MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLL
GGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFV
RPVAVIPTTEIEPILSSPNFGFTNSSAHEEWRNDKHLLSQLGVHLVLCLCI

Clc09G00980 (gene) of Watermelon (cordophanus) v2 genome