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Clc09G01280 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G01280
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAcyl carrier protein
Genome locationClcChr09:1063137..1068225
RNA-Seq ExpressionClc09G01280
SyntenyClc09G01280
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0000036 - acyl carrier activity (molecular function)
InterPro domainsIPR003231 - Acyl carrier protein (ACP)
IPR009081 - Phosphopantetheine binding ACP domain
IPR036736 - ACP-like superfamily
IPR044813 - Acyl carrier protein, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059374.1 acyl carrier protein 1 [Cucumis melo var. makuwa]2.3e-4688.43Show/hide
Query:  RDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAE
        +D +LF G+ +FP+MK+AKAAKGAS L  SFKSKI CS+AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAE
Subjt:  RDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAE

Query:  GISTVQDAADLIEKVKASSAS
        GISTVQDAADLIEKVKASSAS
Subjt:  GISTVQDAADLIEKVKASSAS

KAE8646494.1 hypothetical protein Csa_016687 [Cucumis sativus]6.4e-4975.66Show/hide
Query:  FKSHPLIDCRLTLINVSIRETVL----SYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKF
        F S PL        ++  + TVL    S   RD +LFCG+ +FP+MK+AKAAKGAS L  SF+SKI CS+AQPETLEVVQEIIAKQLSLEQSAVIPQTKF
Subjt:  FKSHPLIDCRLTLINVSIRETVL----SYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKF

Query:  SDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS
        SDLGADSLDTVEIMMALEE+FGVSIGEGGAEGISTVQDAADLIEKVKASSAS
Subjt:  SDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS

XP_008462262.1 PREDICTED: acyl carrier protein 1, chloroplastic-like isoform X1 [Cucumis melo]1.0e-4674.19Show/hide
Query:  FKSHPL---IDCRLTLINVSIRETVL----SYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQ
        F S PL   + C  ++ N   + T L    +   +D +LF G+ +FP+MK+AKAAKGAS L  SFKSKI CS+AQPETLEVVQEIIAKQLSLEQSAVIPQ
Subjt:  FKSHPL---IDCRLTLINVSIRETVL----SYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQ

Query:  TKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS
        TKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS
Subjt:  TKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS

XP_023514490.1 acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo]5.2e-4383.05Show/hide
Query:  TLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGIS
        +LFC Q +FP++++AK A+G   LPT FKS ISCS+AQPET++VVQEIIAKQLSLEQSAVIPQTKFS+LGADSLDTVEIMMALEEKFGVSIGEGGAEGIS
Subjt:  TLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGIS

Query:  TVQDAADLIEKVKASSAS
        TVQDAADLIEKVK SSAS
Subjt:  TVQDAADLIEKVKASSAS

XP_038897463.1 acyl carrier protein-like [Benincasa hispida]1.6e-4776.82Show/hide
Query:  FKSHPL---IDCRLTLINVSIRETVLSYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFS
        F S PL   + C  +  N S    + S   RD TL CGQ LF NM++AKA+KGAS LPT FKS ISCS+AQPETL+VVQEIIAKQLSLEQSAVIPQTKFS
Subjt:  FKSHPL---IDCRLTLINVSIRETVLSYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFS

Query:  DLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS
        DLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDA DLIEKVKASSAS
Subjt:  DLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS

TrEMBL top hitse value%identityAlignment
A0A0A0K6W2 Acyl carrier protein1.2e-4886.4Show/hide
Query:  SYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGE
        S   RD +LFCG+ +FP+MK+AKAAKGAS L  SF+SKI CS+AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEE+FGVSIGE
Subjt:  SYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGE

Query:  GGAEGISTVQDAADLIEKVKASSAS
        GGAEGISTVQDAADLIEKVKASSAS
Subjt:  GGAEGISTVQDAADLIEKVKASSAS

A0A1S3CGK8 Acyl carrier protein4.9e-4774.19Show/hide
Query:  FKSHPL---IDCRLTLINVSIRETVL----SYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQ
        F S PL   + C  ++ N   + T L    +   +D +LF G+ +FP+MK+AKAAKGAS L  SFKSKI CS+AQPETLEVVQEIIAKQLSLEQSAVIPQ
Subjt:  FKSHPL---IDCRLTLINVSIRETVL----SYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQ

Query:  TKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS
        TKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS
Subjt:  TKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS

A0A5A7UWB3 Acyl carrier protein1.1e-4688.43Show/hide
Query:  RDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAE
        +D +LF G+ +FP+MK+AKAAKGAS L  SFKSKI CS+AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAE
Subjt:  RDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAE

Query:  GISTVQDAADLIEKVKASSAS
        GISTVQDAADLIEKVKASSAS
Subjt:  GISTVQDAADLIEKVKASSAS

A0A6J1HII2 Acyl carrier protein2.4e-4169.86Show/hide
Query:  SHPLIDCRLTLINVSIRETVLSYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGAD
        S PL+    TL + ++  +  +++ R+ +LF  + +FP+++ AKAA+G   LPT FKS ISCS+AQPET++VVQEIIAKQLSLEQS VIPQTKFS+LGAD
Subjt:  SHPLIDCRLTLINVSIRETVLSYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGAD

Query:  SLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS
        SLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVK SSAS
Subjt:  SLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS

A0A6J1HKE0 Acyl carrier protein1.3e-3968Show/hide
Query:  SHPLIDCRLTLINVSIRETVLSYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGAD
        S PL+    TL + ++  +  +++ R+ +LF  + +FP+++ AKAA+G   LPT FKS ISCS+AQPET++VVQEIIAKQLSLEQS VIPQTKFS+LGAD
Subjt:  SHPLIDCRLTLINVSIRETVLSYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGAD

Query:  SLDT----VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS
        SLDT    VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVK SSAS
Subjt:  SLDT----VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS

SwissProt top hitse value%identityAlignment
P07088 Acyl carrier protein SF2, chloroplastic3.3e-1654.44Show/hide
Query:  LPTSFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        +PT F   ISC+ A+PET+E V +I+ KQLSL +   V+ +TKF+DLGADSLDTVEI+M LEE+F + + E  A+ I+TV++AA+LIE++
Subjt:  LPTSFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV

P52411 Acyl carrier protein 1, chloroplastic3.9e-1748.72Show/hide
Query:  VRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGG
        +R  +L   +  FP++K +K         +SF  ++SC  A+PET+  V  I+ KQL+L + S V   +KFS LGADSLDTVEI+M LEE+FG+S+ E  
Subjt:  VRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGG

Query:  AEGISTVQDAADLIEKV
        A+ I TVQDAADLIEK+
Subjt:  AEGISTVQDAADLIEKV

P52412 Acyl carrier protein 2, chloroplastic4.3e-1657.47Show/hide
Query:  SFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        SF  +++C  A+PET+  V  I+ KQL+L + S V   +KFS LGADSLDTVEI+M LEE+FG+S+ E  A+ I TVQDAADLIEK+
Subjt:  SFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV

P52413 Acyl carrier protein 3, chloroplastic4.3e-1647.86Show/hide
Query:  VRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGG
        +R  +L     +FP+++ ++        P SF+    C  A+ ET+  V EI+ KQL+L E S V   +KFS LGADSLDTVEI+M LEE+FG+S+ E  
Subjt:  VRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGG

Query:  AEGISTVQDAADLIEKV
        A+ I TVQDAADLIEK+
Subjt:  AEGISTVQDAADLIEKV

P93092 Acyl carrier protein 1, chloroplastic1.0e-1754.64Show/hide
Query:  KGASPLPTSFKSK--ISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        KG S  P   +S   + C  A+PET+E V  I+ KQL+L + SAV  ++KF+ LGADSLDTVEI+M LEE+FG+++ E  A+ I+TVQDAADLIEK+
Subjt:  KGASPLPTSFKSK--ISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV

Arabidopsis top hitse value%identityAlignment
AT1G54580.1 acyl carrier protein 21.9e-1445.71Show/hide
Query:  FPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAAD
        F N + +  +     LPT  +  +SC+ A+PET++ V  ++ KQLSL E   +   TKF+ LGADSLDTVEI+M LEE+FG+ + E  A+ I+TV+ AA 
Subjt:  FPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAAD

Query:  LIEKV
        LIE++
Subjt:  LIEKV

AT1G54630.1 acyl carrier protein 32.1e-1348.42Show/hide
Query:  LPTSFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA
        LPT  +  + C+ A+PET++ V  ++ KQLSL E   +   TKF+ LGADSLDTVEI+M LEE+FG+ + E  A+ I+TV+ AA LIE++    A
Subjt:  LPTSFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA

AT3G05020.1 acyl carrier protein 13.8e-1551.72Show/hide
Query:  SFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        S +  +SC+ A+ ET+E V  I+ KQLSL     V+ +TKF+DLGADSLDTVEI+M LEE+F + + E  A+ I+TV+ AA+LIE++
Subjt:  SFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV

AT4G25050.1 acyl carrier protein 45.8e-1643.65Show/hide
Query:  SIRETVLSYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPT-SFKSKISCSIAQPETLEVVQEIIAKQLSLEQSA-VIPQTKFSDLGADSLDTVEIMMALE
        S+  T LS+K    T+   Q+L           G     T S + +ISC+ A+ ET++ V +I+ +QL+L     +  ++KFS LGADSLDTVEI+MALE
Subjt:  SIRETVLSYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPT-SFKSKISCSIAQPETLEVVQEIIAKQLSLEQSA-VIPQTKFSDLGADSLDTVEIMMALE

Query:  EKFGVSIGEGGAEGISTVQDAADLIE
        EKF +S+ E  A+ I+T+Q+AADLIE
Subjt:  EKFGVSIGEGGAEGISTVQDAADLIE

AT5G27200.1 acyl carrier protein 55.8e-1656.1Show/hide
Query:  ISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV
        +SC++ Q ET+E V EI+ KQLSL +   V   TKF++LGADSLDTVEI+M LEE+FG+++ E  A+ I+TVQ AA+LIE++
Subjt:  ISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTATTTATTTCAAATCTCATCCACTAATTGATTGCAGGTTAACCTTAATTAATGTGAGTATCAGGGAGACTGTTTTGTCATATAAAGTCAGGGATTGTACTTTGTT
TTGTGGGCAGATGCTGTTCCCCAACATGAAAATAGCAAAGGCTGCAAAAGGAGCATCCCCACTTCCCACATCCTTCAAATCAAAGATTTCTTGCTCCATTGCCCAACCAG
AAACACTGGAAGTTGTTCAAGAAATAATTGCCAAGCAACTCTCTCTAGAACAAAGCGCAGTGATCCCTCAAACAAAGTTTTCTGATTTGGGAGCTGATTCTCTTGACACC
GTCGAGATCATGATGGCTTTGGAAGAGAAGTTTGGAGTATCCATTGGAGAAGGTGGAGCAGAGGGCATCTCTACCGTTCAAGACGCTGCTGATCTGATCGAGAAAGTCAA
GGCATCCTCTGCAAGTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAATGCCAAGAAAATGTTTATTTATTTCAAATCTCATCCACTAATTGATTGCAGGTTAACCTTAATTAATGTGAGTATCAGGGAGACTGTTTTGTCATATAAAGTCAG
GGATTGTACTTTGTTTTGTGGGCAGATGCTGTTCCCCAACATGAAAATAGCAAAGGCTGCAAAAGGAGCATCCCCACTTCCCACATCCTTCAAATCAAAGATTTCTTGCT
CCATTGCCCAACCAGAAACACTGGAAGTTGTTCAAGAAATAATTGCCAAGCAACTCTCTCTAGAACAAAGCGCAGTGATCCCTCAAACAAAGTTTTCTGATTTGGGAGCT
GATTCTCTTGACACCGTCGAGATCATGATGGCTTTGGAAGAGAAGTTTGGAGTATCCATTGGAGAAGGTGGAGCAGAGGGCATCTCTACCGTTCAAGACGCTGCTGATCT
GATCGAGAAAGTCAAGGCATCCTCTGCAAGTTAAACCAAACAGCAACATATCTATTCATGCCTTCAAATCTCAATATTTTGAATTAGATCAGTTTGTTATGGTTTTGTGT
TCATCTTTATTTCAAGTAAGTTGTAATTTGTGGCGCAAAACTGAGTCAAAGTGACATGAAAACCAAAGAAAGAAGAGTTGCAAATCTGAATGAAATAATACTATACATTA
TATATACATA
Protein sequenceShow/hide protein sequence
MFIYFKSHPLIDCRLTLINVSIRETVLSYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDT
VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS