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Clc09G01320 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G01320
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAuxin responsive SAUR protein
Genome locationClcChr09:1091671..1092187
RNA-Seq ExpressionClc09G01320
SyntenyClc09G01320
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575422.1 Auxin-responsive protein SAUR78, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4985.48Show/hide
Query:  MVKA-GTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKSSFDDDGVLVVSCEVVMFEH
        MVKA GTLTKLKSAIKRWPSI+KLGRSSSSMSVA VSDG NIG++ SK+L TVYVGKSRR Y+VSLDV+AHPLFQELVDKS+ D+DG +VVSCEVVMFEH
Subjt:  MVKA-GTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKSSFDDDGVLVVSCEVVMFEH

Query:  LLWMLENAATQLGSTEELAEFYTC
        LLWMLENAATQLGSTEEL EFYTC
Subjt:  LLWMLENAATQLGSTEELAEFYTC

KAG7013963.1 hypothetical protein SDJN02_24132, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-4984.68Show/hide
Query:  MVKA-GTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKSSFDDDGVLVVSCEVVMFEH
        MVKA GTLTKLKSAIKRWPSI+KLGRSSSSMSVA VSDG NIG++ SK+L TVYVGKSRR Y+VSLDV+AHPLFQELVDKS+ D+DG ++VSCEVVMFEH
Subjt:  MVKA-GTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKSSFDDDGVLVVSCEVVMFEH

Query:  LLWMLENAATQLGSTEELAEFYTC
        LLWMLENAATQLGSTEEL EFYTC
Subjt:  LLWMLENAATQLGSTEELAEFYTC

XP_004141724.1 auxin-responsive protein SAUR78 [Cucumis sativus]2.6e-5188.8Show/hide
Query:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQN-NSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDK-SSFDDDGVLVVSCEVVMFE
        MVKAGTLTKLKSAIKRWPSITKLGRSSSS+SVA VSDG N+G+N NSK+LRTVYVGKSRR Y+VSLDVV HPLFQELVDK SSFD+DG LVVSCEVVMFE
Subjt:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQN-NSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDK-SSFDDDGVLVVSCEVVMFE

Query:  HLLWMLENAATQLGSTEELAEFYTC
        HLLWMLENAATQLGSTEEL EFYTC
Subjt:  HLLWMLENAATQLGSTEELAEFYTC

XP_008462260.1 PREDICTED: uncharacterized protein LOC103500661 [Cucumis melo]7.6e-5188.8Show/hide
Query:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQN-NSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDK-SSFDDDGVLVVSCEVVMFE
        MVKAGTLTKLKSAIKRWPSITKLGRSSSS+SVA VSDG N+G N NSK+LRTVYVGKSRR Y+VSLDVV HPLFQELVDK SSFD+DG LVVSCEVVMFE
Subjt:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQN-NSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDK-SSFDDDGVLVVSCEVVMFE

Query:  HLLWMLENAATQLGSTEELAEFYTC
        HLLWMLENAATQLGSTEEL EFYTC
Subjt:  HLLWMLENAATQLGSTEELAEFYTC

XP_038899152.1 auxin-responsive protein SAUR77 [Benincasa hispida]5.6e-5491.06Show/hide
Query:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKSSFDDDGVLVVSCEVVMFEHL
        MVKAGTLTKLKSAIKRWPSITKLGRSSSS+SVA VSDG NIG+N SK+LRTVYVGKSRR YYVSLDVVAHPLFQELVDKSSFDD+G +VVSCEVVMFEHL
Subjt:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKSSFDDDGVLVVSCEVVMFEHL

Query:  LWMLENAATQLGSTEELAEFYTC
        LWMLENAATQLGSTEEL EFYTC
Subjt:  LWMLENAATQLGSTEELAEFYTC

TrEMBL top hitse value%identityAlignment
A0A0A0KAQ4 Uncharacterized protein1.3e-5188.8Show/hide
Query:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQN-NSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDK-SSFDDDGVLVVSCEVVMFE
        MVKAGTLTKLKSAIKRWPSITKLGRSSSS+SVA VSDG N+G+N NSK+LRTVYVGKSRR Y+VSLDVV HPLFQELVDK SSFD+DG LVVSCEVVMFE
Subjt:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQN-NSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDK-SSFDDDGVLVVSCEVVMFE

Query:  HLLWMLENAATQLGSTEELAEFYTC
        HLLWMLENAATQLGSTEEL EFYTC
Subjt:  HLLWMLENAATQLGSTEELAEFYTC

A0A1S3CI22 uncharacterized protein LOC1035006613.7e-5188.8Show/hide
Query:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQN-NSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDK-SSFDDDGVLVVSCEVVMFE
        MVKAGTLTKLKSAIKRWPSITKLGRSSSS+SVA VSDG N+G N NSK+LRTVYVGKSRR Y+VSLDVV HPLFQELVDK SSFD+DG LVVSCEVVMFE
Subjt:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQN-NSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDK-SSFDDDGVLVVSCEVVMFE

Query:  HLLWMLENAATQLGSTEELAEFYTC
        HLLWMLENAATQLGSTEEL EFYTC
Subjt:  HLLWMLENAATQLGSTEELAEFYTC

A0A5D3BXT3 Auxin responsive SAUR protein3.7e-5188.8Show/hide
Query:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQN-NSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDK-SSFDDDGVLVVSCEVVMFE
        MVKAGTLTKLKSAIKRWPSITKLGRSSSS+SVA VSDG N+G N NSK+LRTVYVGKSRR Y+VSLDVV HPLFQELVDK SSFD+DG LVVSCEVVMFE
Subjt:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQN-NSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDK-SSFDDDGVLVVSCEVVMFE

Query:  HLLWMLENAATQLGSTEELAEFYTC
        HLLWMLENAATQLGSTEEL EFYTC
Subjt:  HLLWMLENAATQLGSTEELAEFYTC

A0A6J1GNV0 uncharacterized protein LOC1114561211.9e-4783.06Show/hide
Query:  MVKA-GTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKSSFDDDGVLVVSCEVVMFEH
        MVKA GTLTKLKSAIKRWPSI+KLGRSSSS+SVA VS+  NIG++ SK+L TVYVGKSRR Y+VSLDV+AHPLFQELVDKS  D+DG +VVSCEVVMFEH
Subjt:  MVKA-GTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKSSFDDDGVLVVSCEVVMFEH

Query:  LLWMLENAATQLGSTEELAEFYTC
        LLWMLENAATQLGSTEEL EFYTC
Subjt:  LLWMLENAATQLGSTEELAEFYTC

A0A6J1JXK2 auxin-responsive protein SAUR50-like1.0e-4884.68Show/hide
Query:  MVKA-GTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKSSFDDDGVLVVSCEVVMFEH
        MVKA GTLTKLKSAIKRWPSI+KLGRSSSS+SVA VSDG NI +N SK+L TVYVGKSRR Y+VSLDV+AHPLFQELVDKSS D+D  +VVSCEVVMFEH
Subjt:  MVKA-GTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKSSFDDDGVLVVSCEVVMFEH

Query:  LLWMLENAATQLGSTEELAEFYTC
        LLWMLENAATQLGSTEEL EFYTC
Subjt:  LLWMLENAATQLGSTEELAEFYTC

SwissProt top hitse value%identityAlignment
Q29PU2 Auxin-responsive protein SAUR767.2e-2047.29Show/hide
Query:  MVKAGT-LTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQEL--VDKSSFDDDGVLVVSCEVVMF
        M K G  L KLKS +K+  S     + +   +    S  + +    S+DL+TVYVG++RR Y+VS DVV+HPLFQ+L  VD     +DG + VSCEVV+F
Subjt:  MVKAGT-LTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQEL--VDKSSFDDDGVLVVSCEVVMF

Query:  EHLLWMLENA---ATQLGSTEELAEFYTC
        EHLLWMLENA    ++  S  EL EFY C
Subjt:  EHLLWMLENA---ATQLGSTEELAEFYTC

Q9C9E1 Auxin-responsive protein SAUR787.5e-2553.6Show/hide
Query:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKS---SFDDDGVLVVSCEVVMF
        M K G LTKLKSA+K+WPS  K      S S A VSD   + ++N  +L  VYVG++RR Y +  D+++HPLFQELVD+S   S + D  +VV+CEVV+F
Subjt:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKS---SFDDDGVLVVSCEVVMF

Query:  EHLLWMLENAATQLGSTEELAEFYT
        EHLLWML+ +  + GS EELAEFYT
Subjt:  EHLLWMLENAATQLGSTEELAEFYT

Q9LQI6 Auxin-responsive protein SAUR772.0e-2551.15Show/hide
Query:  GTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKSS-----FDDDGVLVVSCEVVMFEH
        G LTKLKSAIK+WPS+TK   S+   +   VS+      +  +DL  VYVGKSRR Y +S  V+AHPLFQEL+D+SS       D   ++V+CEVV+FEH
Subjt:  GTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKSS-----FDDDGVLVVSCEVVMFEH

Query:  LLWMLENAAT--------QLGSTEELAEFYT
        LLWML+N+++        + GS EELAEFYT
Subjt:  LLWMLENAAT--------QLGSTEELAEFYT

Arabidopsis top hitse value%identityAlignment
AT1G17345.1 SAUR-like auxin-responsive protein family1.4e-2651.15Show/hide
Query:  GTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKSS-----FDDDGVLVVSCEVVMFEH
        G LTKLKSAIK+WPS+TK   S+   +   VS+      +  +DL  VYVGKSRR Y +S  V+AHPLFQEL+D+SS       D   ++V+CEVV+FEH
Subjt:  GTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKSS-----FDDDGVLVVSCEVVMFEH

Query:  LLWMLENAAT--------QLGSTEELAEFYT
        LLWML+N+++        + GS EELAEFYT
Subjt:  LLWMLENAAT--------QLGSTEELAEFYT

AT1G72430.1 SAUR-like auxin-responsive protein family5.3e-2653.6Show/hide
Query:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKS---SFDDDGVLVVSCEVVMF
        M K G LTKLKSA+K+WPS  K      S S A VSD   + ++N  +L  VYVG++RR Y +  D+++HPLFQELVD+S   S + D  +VV+CEVV+F
Subjt:  MVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKS---SFDDDGVLVVSCEVVMF

Query:  EHLLWMLENAATQLGSTEELAEFYT
        EHLLWML+ +  + GS EELAEFYT
Subjt:  EHLLWMLENAATQLGSTEELAEFYT

AT3G12955.1 SAUR-like auxin-responsive protein family2.9e-0833.33Show/hide
Query:  KLKSAIKRWPSI-TKLGRSSSSMSVATVSDGTNIGQNNSKDL---------RTVYVGKSRRLYYVSLDVVAHPLFQELVDK-----SSFDDDG--VLVVS
        +L   ++R  S+ T+LGRS S  S+ + S      Q++ +D+         +TV VG++++ Y +S   + HPL   LV+K        ++DG  ++ V 
Subjt:  KLKSAIKRWPSI-TKLGRSSSSMSVATVSDGTNIGQNNSKDL---------RTVYVGKSRRLYYVSLDVVAHPLFQELVDK-----SSFDDDG--VLVVS

Query:  CEVVMFEHLLWMLE--NAATQLGSTEELAEFY
        CEVV+F+HLLWMLE  +    L S ++ A  Y
Subjt:  CEVVMFEHLLWMLE--NAATQLGSTEELAEFY

AT5G20810.1 SAUR-like auxin-responsive protein family2.0e-0426.15Show/hide
Query:  LTKLKSAIKRWPSITKLGRS------SSSMSVATVSDGTNIG----QNNSKDLRT----------------VYVGKSRRLYYVSLDVVAHPLFQELVDKS
        + +LK  +++W ++T   +S      +   +VA +S   N      +N   D  T                VYVG   R + +    ++H LF+ L++K+
Subjt:  LTKLKSAIKRWPSITKLGRS------SSSMSVATVSDGTNIG----QNNSKDLRT----------------VYVGKSRRLYYVSLDVVAHPLFQELVDKS

Query:  ----SFDDDGVLVVSCEVVMFEHLLWMLEN
             FD  G L + CEV  F++LL  +EN
Subjt:  ----SFDDDGVLVVSCEVVMFEHLLWMLEN

AT5G20820.1 SAUR-like auxin-responsive protein family5.1e-2147.29Show/hide
Query:  MVKAGT-LTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQEL--VDKSSFDDDGVLVVSCEVVMF
        M K G  L KLKS +K+  S     + +   +    S  + +    S+DL+TVYVG++RR Y+VS DVV+HPLFQ+L  VD     +DG + VSCEVV+F
Subjt:  MVKAGT-LTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQEL--VDKSSFDDDGVLVVSCEVVMF

Query:  EHLLWMLENA---ATQLGSTEELAEFYTC
        EHLLWMLENA    ++  S  EL EFY C
Subjt:  EHLLWMLENA---ATQLGSTEELAEFYTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCGTGGGCCATGCACCCATGGTCAAAGCCGGAACTCTCACCAAGCTCAAGTCAGCCATTAAAAGATGGCCCTCCATCACCAAGCTCGGTCGGAGCTCTAGCTCCAT
GTCGGTTGCCACCGTGAGCGATGGTACCAATATTGGCCAAAACAACTCCAAGGACCTTCGCACGGTCTATGTCGGTAAGTCCCGACGACTGTATTATGTCAGCTTAGATG
TCGTAGCACACCCTCTATTTCAAGAGTTGGTGGATAAGTCATCGTTTGACGATGACGGTGTGCTGGTGGTTTCTTGTGAGGTTGTCATGTTTGAGCATTTATTATGGATG
TTGGAGAATGCGGCGACGCAATTGGGGTCGACTGAGGAACTCGCCGAGTTCTACACTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCGTGGGCCATGCACCCATGGTCAAAGCCGGAACTCTCACCAAGCTCAAGTCAGCCATTAAAAGATGGCCCTCCATCACCAAGCTCGGTCGGAGCTCTAGCTCCAT
GTCGGTTGCCACCGTGAGCGATGGTACCAATATTGGCCAAAACAACTCCAAGGACCTTCGCACGGTCTATGTCGGTAAGTCCCGACGACTGTATTATGTCAGCTTAGATG
TCGTAGCACACCCTCTATTTCAAGAGTTGGTGGATAAGTCATCGTTTGACGATGACGGTGTGCTGGTGGTTTCTTGTGAGGTTGTCATGTTTGAGCATTTATTATGGATG
TTGGAGAATGCGGCGACGCAATTGGGGTCGACTGAGGAACTCGCCGAGTTCTACACTTGTTGA
Protein sequenceShow/hide protein sequence
MRVGHAPMVKAGTLTKLKSAIKRWPSITKLGRSSSSMSVATVSDGTNIGQNNSKDLRTVYVGKSRRLYYVSLDVVAHPLFQELVDKSSFDDDGVLVVSCEVVMFEHLLWM
LENAATQLGSTEELAEFYTC