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Clc09G01430 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G01430
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLate embryogenesis abundant protein
Genome locationClcChr09:1195629..1196573
RNA-Seq ExpressionClc09G01430
SyntenyClc09G01430
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3012452.1 SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Olea europaea subsp. europaea]7.9e-1352.27Show/hide
Query:  MAKVTGNGLYFIRRLSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPK
        MAK + N L  +RR  S+VA+E   TQTT S V+++V  +V           +K  FWMKDPK+GNWIPE+HF++IDV ELREKLL K
Subjt:  MAKVTGNGLYFIRRLSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPK

KAA0059359.1 putative Senescence-associated protein 21 [Cucumis melo var. makuwa]1.1e-2786.84Show/hide
Query:  LSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPKPK
        +SSS+ASEQL  QTTASMVVRKVKAAVETS YDNE VEQK+TFWMKDPKSGNWIPE+HF+EIDVVELREKLL KPK
Subjt:  LSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPKPK

KAE8646489.1 hypothetical protein Csa_015817 [Cucumis sativus]5.1e-2886.84Show/hide
Query:  LSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPKPK
        +SSSVASEQL  QTTASMVVRKVKAAVET GYDNE VEQK+TFWMKDPKSGNWIPE+HF+E+DVVELREKLL KPK
Subjt:  LSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPKPK

KAG6575415.1 hypothetical protein SDJN03_26054, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2674.73Show/hide
Query:  MAKVTGNGLYFIRRLSSSVASEQLNTQTTASMVVRKVKAAVETSGYDN-EAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPKPK
        MAK+TGNG+YFIRRLSS VASEQL  + TA M V+ V A VETSG D+ +AVEQK  FWMKDPKSGNWIPE+HF EIDVVELREKLL K K
Subjt:  MAKVTGNGLYFIRRLSSSVASEQLNTQTTASMVVRKVKAAVETSGYDN-EAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPKPK

XP_022843012.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Olea europaea var. sylvestris]2.7e-1351.14Show/hide
Query:  MAKVTGNGLYFIRRLSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPK
        MAK + N L  + R  S+VA+E   TQTT S V+++V  +V           +K  FWMKDPK+GNWIPE+HF++IDV ELREKLL K
Subjt:  MAKVTGNGLYFIRRLSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPK

TrEMBL top hitse value%identityAlignment
A0A0A0K7L4 Uncharacterized protein5.5e-3687.78Show/hide
Query:  MAKVTGNGLYFIRRLSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPKPK
        MAKVTGN LYFIRR+SSSVASEQL  QTTASMVVRKVKAAVET GYDNE VEQK+TFWMKDPKSGNWIPE+HF+E+DVVELREKLL KPK
Subjt:  MAKVTGNGLYFIRRLSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPKPK

A0A2N9EY27 Uncharacterized protein1.9e-1253.93Show/hide
Query:  MAKVTGNGLYFIRR-LSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPK
        MAKV  N L  +RR  S+SV + ++        VV  ++   E+SG    A EQK+TFWM+DPKSGNWIPESHF EIDV ELREK L K
Subjt:  MAKVTGNGLYFIRR-LSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPK

A0A5D3BWU2 Putative Senescence-associated protein 215.5e-2886.84Show/hide
Query:  LSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPKPK
        +SSS+ASEQL  QTTASMVVRKVKAAVETS YDNE VEQK+TFWMKDPKSGNWIPE+HF+EIDVVELREKLL KPK
Subjt:  LSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPKPK

A0A6A1VZA4 Uncharacterized protein8.5e-1356.67Show/hide
Query:  MAKVTGNGLYFIRRLSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPKPK
        MAKV  N L  + R S SVA   L        V    + A E+SG   EA EQK+ FWMKD KSGNWIPESHF EIDVV+LREKLLP+ K
Subjt:  MAKVTGNGLYFIRRLSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPKPK

A0A7N2LLH6 Uncharacterized protein1.4e-1255.56Show/hide
Query:  MAKVTGNGLYFIRRLSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPKPK
        MA+V  + L  +RR + SVA E    Q     V+  VK A E+ G    A EQK+ FWM+DPKSGNWIPESHF EI+V ELREKLLPK K
Subjt:  MAKVTGNGLYFIRRLSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPKPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGGTTACTGGAAATGGTCTCTACTTTATAAGGCGACTGAGCTCTTCGGTTGCATCCGAGCAACTTAACACACAAACAACTGCATCGATGGTGGTGAGGAAGGT
GAAGGCAGCTGTGGAAACAAGTGGTTATGATAATGAGGCAGTTGAACAGAAGCAGACATTTTGGATGAAAGATCCCAAGAGTGGAAACTGGATTCCTGAGAGCCACTTTC
AAGAGATTGATGTGGTTGAATTGAGAGAGAAACTGCTACCTAAACCTAAACCGAAGAAGCTGCTCTAA
mRNA sequenceShow/hide mRNA sequence
TTCAAACTAAAAATGCACTCTCCTTCTTCAGCACTTCAACTTCTATGTCTCCCTTCCAAATTATAAATATTTGTGTGTGATCTTTCCATTCAAAATCAAACATAGAAAAG
GAAAACTTCCTCTTTCCCTCTCCATATTCTTCTTCTTTAAGCATGGCTAAGGTTACTGGAAATGGTCTCTACTTTATAAGGCGACTGAGCTCTTCGGTTGCATCCGAGCA
ACTTAACACACAAACAACTGCATCGATGGTGGTGAGGAAGGTGAAGGCAGCTGTGGAAACAAGTGGTTATGATAATGAGGCAGTTGAACAGAAGCAGACATTTTGGATGA
AAGATCCCAAGAGTGGAAACTGGATTCCTGAGAGCCACTTTCAAGAGATTGATGTGGTTGAATTGAGAGAGAAACTGCTACCTAAACCTAAACCGAAGAAGCTGCTCTAA
AACAGCAAGTGAAAAGCTTCATTTATGCGCAAGAACAAAATTTCCATCTTTATCCATGCTACACTAAATAACACCTACTGCAAAAACTATTCTGCACTACTTTTTCTCTT
TTTCTCTCTCTCTCTAATCTGTCACTTCTATCAGTTTCAAGTCTCATATGAATCCTTTCAAGTTAAATGGTGATGATTTTGACGGATGAAAGAAGGGAATCCGAATCTCA
TCAAGTTTATCATGAAAGCAAATCGCCAGATCACAGGAGTTGCAACAAGTCAAGAATGATGAGTTGGACTATGCAAATTAGTAAATACGTACAATTATCAACTCTAATAT
GGACAAACATCTCACTTGATATTTATTCCTAAGGTTTATTTTATTTTATGTTGATTACTTTTCAGAATGGACCATTCCA
Protein sequenceShow/hide protein sequence
MAKVTGNGLYFIRRLSSSVASEQLNTQTTASMVVRKVKAAVETSGYDNEAVEQKQTFWMKDPKSGNWIPESHFQEIDVVELREKLLPKPKPKKLL