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Clc09G01470 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G01470
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:1220808..1221856
RNA-Seq ExpressionClc09G01470
SyntenyClc09G01470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575412.1 hypothetical protein SDJN03_26051, partial [Cucurbita argyrosperma subsp. sororia]1.1e-6184.83Show/hide
Query:  MAIT-CSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRE
        MA+T C C SSS NVSLLKSGLSVS KPISRIWMLKP++FPLK SLPLQIRSSIKNKVFEDQ EGVICY DENGEI+CEGYDEGPR H NLPEKGNHQRE
Subjt:  MAIT-CSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRE

Query:  TEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC
        TEIIDLLLKQSWIHLG+ GGGELS A+KGVAV+ D NVNGFNS C
Subjt:  TEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC

XP_008462240.1 PREDICTED: uncharacterized protein LOC103500644 [Cucumis melo]9.0e-6183.56Show/hide
Query:  MAITCSCSSSS--LNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQR
        MA+T S SSSS  LN S LK+GLSVS KP++RIWMLKP+RFPLKNSLPL+IRSSIKNKVFEDQ EGVICYADENGEIICEGYDEGPR HQN+ EKGNHQR
Subjt:  MAITCSCSSSS--LNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQR

Query:  ETEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC
        ETEIIDLLLKQSWI LGK  GGE SHAEKGVAV+KDLN+NGFNS C
Subjt:  ETEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC

XP_022953822.1 uncharacterized protein LOC111456239 isoform X1 [Cucurbita moschata]1.4e-6184.83Show/hide
Query:  MAIT-CSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRE
        MA+T C C SSS NVSLLKSGLSVS KPISRIWMLKP++FPLK SLPLQIRSSIKNKVFEDQ EGVICY DENGEI+CEGYDEGPR H NLPEKGNHQRE
Subjt:  MAIT-CSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRE

Query:  TEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC
        TEIIDLLLKQSWIHLGK GGGELS A+KGVAV+ D N NGFNS C
Subjt:  TEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC

XP_023548903.1 uncharacterized protein LOC111807416 isoform X1 [Cucurbita pepo subsp. pepo]2.8e-6285.52Show/hide
Query:  MAIT-CSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRE
        MA+T C CSSSS NVSLLKSGLSVS KPISRIWMLKP++FPLK SLPLQIRSSIKNKVFEDQ EGVICY DENGEI+CEGYDEGPR H NLPEKGNHQRE
Subjt:  MAIT-CSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRE

Query:  TEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC
        TEIIDLLLKQSWIHLG+ GGGELS A+KGVAV+ D NVNGFNS C
Subjt:  TEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC

XP_038897486.1 uncharacterized protein LOC120085537 [Benincasa hispida]2.9e-6792.41Show/hide
Query:  MAIT-CSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRE
        MAIT C CSSSS NVSLLKSGLSVSVKPISRIWML+P+RFPLKNSLPLQIRSSIKNKVFEDQ EGVICYADENGEIICEGYDEGPRIHQ+LPEKGNHQRE
Subjt:  MAIT-CSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRE

Query:  TEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC
        TEIID LLKQSWIHLGK+GGGELSHAEKGVAVKKD N NGFNSLC
Subjt:  TEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC

TrEMBL top hitse value%identityAlignment
A0A0A0K9A8 Uncharacterized protein9.1e-5980.56Show/hide
Query:  MAITCSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRET
        MA+T S SSSSLN SLLK+GLSVS KPI+RIWM+KP+R PLKNS  L+IRSS+KNKVFEDQ EGVICYADENGEIICEGYDEGPR HQN+ EKGN+QRE 
Subjt:  MAITCSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRET

Query:  EIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC
        EIIDLLLKQ+WI LGK  GGELSHAEK VAV+KDLN+NGFNS C
Subjt:  EIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC

A0A1S3CGF5 uncharacterized protein LOC1035006444.4e-6183.56Show/hide
Query:  MAITCSCSSSS--LNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQR
        MA+T S SSSS  LN S LK+GLSVS KP++RIWMLKP+RFPLKNSLPL+IRSSIKNKVFEDQ EGVICYADENGEIICEGYDEGPR HQN+ EKGNHQR
Subjt:  MAITCSCSSSS--LNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQR

Query:  ETEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC
        ETEIIDLLLKQSWI LGK  GGE SHAEKGVAV+KDLN+NGFNS C
Subjt:  ETEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC

A0A6J1D7W7 uncharacterized protein LOC111018083 isoform X15.2e-5480.14Show/hide
Query:  MAIT---CSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSR-FPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNH
        MA+T    S SSSS NV LLKSGL  S+KP+SR+WML+P++ FPLK SLPLQIRSSIKNKVFEDQ EGVICYADENGEIICEGYDEGPR HQN  EK NH
Subjt:  MAIT---CSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSR-FPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNH

Query:  QRETEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNS
        QRETEIIDLLLKQSWIHLGK GGGELS AEKG  +KKD NVNGFNS
Subjt:  QRETEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNS

A0A6J1GPC1 uncharacterized protein LOC111456239 isoform X16.7e-6284.83Show/hide
Query:  MAIT-CSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRE
        MA+T C C SSS NVSLLKSGLSVS KPISRIWMLKP++FPLK SLPLQIRSSIKNKVFEDQ EGVICY DENGEI+CEGYDEGPR H NLPEKGNHQRE
Subjt:  MAIT-CSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRE

Query:  TEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC
        TEIIDLLLKQSWIHLGK GGGELS A+KGVAV+ D N NGFNS C
Subjt:  TEIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC

A0A6J1JZ71 uncharacterized protein LOC111488739 isoform X17.4e-6184.72Show/hide
Query:  MAITCSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRET
        MA+T  C SSS NVSLLKSGLSVS KPISRIWMLKP++FPLK SLPLQIRSSIKNKVFEDQ EGVICY DENGEI+CEGYDEGPR   NLPEKGNHQRET
Subjt:  MAITCSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRET

Query:  EIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC
        EIIDLLLKQSWIHLG+ GGGELS A+KGVAV+KD NVNGFNS C
Subjt:  EIIDLLLKQSWIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G14280.1 unknown protein2.5e-1658.73Show/hide
Query:  SLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRETEIIDLL
        S P  IR S KN VFED ++G+ICY D+NGE+ICEGYDEGPR     P   ++ RE EI+DLL
Subjt:  SLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRETEIIDLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATAACTTGTTCTTGCTCTTCTTCTTCTCTCAATGTCTCTCTTCTGAAATCTGGTCTTTCAGTTTCAGTTAAGCCTATTAGTAGAATTTGGATGCTTAAACCTTC
AAGATTTCCTCTCAAGAACTCACTCCCACTTCAGATCAGATCTTCCATTAAGAACAAGGTTTTCGAGGATCAATTGGAAGGGGTGATTTGTTACGCAGACGAAAACGGAG
AGATCATCTGCGAAGGATACGATGAGGGCCCTCGCATTCACCAAAACCTTCCCGAAAAAGGGAACCATCAAAGAGAGACAGAGATTATTGATCTCCTACTAAAACAAAGT
TGGATTCATCTAGGAAAAAGTGGTGGGGGAGAGCTAAGCCATGCTGAAAAAGGTGTAGCTGTTAAAAAAGACTTGAATGTGAATGGCTTCAACTCCTTGTGCTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAGAAAAAAAAAGCATTAAATATATGAAACTTAAAGGGGGAAATAGCATAAAACAAATTGGAAAGAGCCCCCACCAAGAAACAGCTGCAAATTCTTGTTCATTATT
CCATCTTCTTCTTGTTATTGTAGTCTCAAACTGATGGCAATAACTTGTTCTTGCTCTTCTTCTTCTCTCAATGTCTCTCTTCTGAAATCTGGTCTTTCAGTTTCAGTTAA
GCCTATTAGTAGAATTTGGATGCTTAAACCTTCAAGATTTCCTCTCAAGAACTCACTCCCACTTCAGATCAGATCTTCCATTAAGAACAAGGTTTTCGAGGATCAATTGG
AAGGGGTGATTTGTTACGCAGACGAAAACGGAGAGATCATCTGCGAAGGATACGATGAGGGCCCTCGCATTCACCAAAACCTTCCCGAAAAAGGGAACCATCAAAGAGAG
ACAGAGATTATTGATCTCCTACTAAAACAAAGTTGGATTCATCTAGGAAAAAGTGGTGGGGGAGAGCTAAGCCATGCTGAAAAAGGTGTAGCTGTTAAAAAAGACTTGAA
TGTGAATGGCTTCAACTCCTTGTGCTAAATCCTAATATGGTTAAACTCGAATGTATGTACTTGCTATCTCCATTGTAAACAGACATTGTTTTTATTTGAGTAATTTTTAG
TAGAACTACTTTCTTCTGTATCTGAATCACTTAATCAAATTCACTGTCCCTAAATTGTATAGT
Protein sequenceShow/hide protein sequence
MAITCSCSSSSLNVSLLKSGLSVSVKPISRIWMLKPSRFPLKNSLPLQIRSSIKNKVFEDQLEGVICYADENGEIICEGYDEGPRIHQNLPEKGNHQRETEIIDLLLKQS
WIHLGKSGGGELSHAEKGVAVKKDLNVNGFNSLC