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Clc09G01625 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G01625
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCytochrome c oxidase subunit 1
Genome locationClcChr09:1356249..1357564
RNA-Seq ExpressionClc09G01625
SyntenyClc09G01625
Gene Ontology termsGO:0006119 - oxidative phosphorylation (biological process)
GO:0015990 - electron transport coupled proton transport (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0045277 - respiratory chain complex IV (cellular component)
GO:0004129 - cytochrome-c oxidase activity (molecular function)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000883 - Cytochrome c oxidase subunit I
IPR023616 - Cytochrome c oxidase-like, subunit I domain
IPR036927 - Cytochrome c oxidase-like, subunit I superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAD01679.1 cytochrome c oxidase, partial [Ephedra distachya]4.3e-1981.82Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI
        YLGMVYAMISIGVL F+VWAHHMFT+GLDVDTRAYFT ATMIIAV T  KIFSWIATM  G  R+I
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI

ABN50276.1 cytochrome oxidase subunit I, partial [Ephedra intermedia]4.3e-1981.82Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI
        YLGMVYAMISIGVL F+VWAHHMFT+GLDVDTRAYFT ATMIIAV T  KIFSWIATM  G  R+I
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI

ABN50284.1 cytochrome oxidase subunit I, partial [Ephedra tweediana]4.3e-1981.82Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI
        YLGMVYAMISIGVL F+VWAHHMFT+GLDVDTRAYFT ATMIIAV T  KIFSWIATM  G  R+I
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI

ABN50285.1 cytochrome oxidase subunit I, partial [Ephedra fragilis]3.3e-1980.3Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI
        YLGM+YAMISIGVL F+VWAHHMFT+GLDVDTRAYFT ATMIIAV T  KIFSWIATM  G  R+I
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI

CAE46638.2 cytochrome oxidase, subunit I [Solanum commersonii]3.3e-1988.52Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG
        YLGMVYAMISIGVL FLVWAHHMFT+GLDVDTRAYFT ATMIIAV T  KIFSWIATM EG
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG

TrEMBL top hitse value%identityAlignment
A0A452YPM1 Cytochrome c oxidase subunit 15.4e-2090.16Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG
        YLGMVYAMISIGVL FLVWAHHMFTMGLDVDTRAYFT ATMIIAV TR KIFSWIATM  G
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG

B6RAP6 Cytochrome c oxidase subunit 1 (Fragment)1.6e-1980.3Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI
        YLGM+YAMISIGVL F+VWAHHMFT+GLDVDTRAYFT ATMIIAV T  KIFSWIATM  G  R+I
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI

B6RAP8 Cytochrome c oxidase subunit 1 (Fragment)2.1e-1981.82Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI
        YLGMVYAMISIGVL F+VWAHHMFT+GLDVDTRAYFT ATMIIAV T  KIFSWIATM  G  R+I
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI

D0PPP4 Cytochrome c oxidase subunit 1 (Fragment)2.1e-1981.82Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI
        YLGMVYAMISIGVL F+VWAHHMFT+GLDVDTRAYFT ATMIIAV T  KIFSWIATM  G  R+I
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI

Q70G81 Cytochrome c oxidase subunit 11.6e-1988.52Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG
        YLGMVYAMISIGVL FLVWAHHMFT+GLDVDTRAYFT ATMIIAV T  KIFSWIATM EG
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG

SwissProt top hitse value%identityAlignment
P08742 Cytochrome c oxidase subunit 12.8e-2186.89Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG
        YLGMVYAMISIGVL FLVWAHHMFT+GLDVDTRAYFT ATMIIAV T  KIFSWIATM  G
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG

P24794 Cytochrome c oxidase subunit 12.8e-2186.89Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG
        YLGMVYAMISIGVL FLVWAHHMFT+GLDVDTRAYFT ATMIIAV T  KIFSWIATM  G
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG

P60620 Cytochrome c oxidase subunit 12.8e-2186.89Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG
        YLGMVYAMISIGVL FLVWAHHMFT+GLDVDTRAYFT ATMIIAV T  KIFSWIATM  G
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG

P68540 Cytochrome c oxidase subunit 12.8e-2186.89Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG
        YLGMVYAMISIGVL FLVWAHHMFT+GLDVDTRAYFT ATMIIAV T  KIFSWIATM  G
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG

Q33439 Cytochrome c oxidase subunit 1 (Fragment)5.6e-2281.82Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI
        YLGMVYAMISIGVL F+VWAHHMFT+GLDVDTRAYFT ATMIIAV T  KIFSWIATM  G  R+I
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNI

Arabidopsis top hitse value%identityAlignment
ATMG01360.1 cytochrome oxidase2.0e-2286.89Show/hide
Query:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG
        YLGMVYAMISIGVL FLVWAHHMFT+GLDVDTRAYFT ATMIIAV T  KIFSWIATM  G
Subjt:  YLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAAAAAAACGAGTATCTAGGCATGGTTTATGCCATGATCAGTATAGGTGTTCTTAGATTTCTTGTTTGGGCTCATCATATGTTTACTATGGGCTTAGACGTTGA
TACCCGTGCCTACTTCACCGTTGCTACCATGATCATAGCAGTCCTCACTAGAAACAAAATCTTTAGTTGGATCGCTACCATGGGGGAGGGGATGGCTCGAAACATAGAGA
CACAGAGACCAAATTCACATCTGAAGTTCCCGCCCCACCGCCTGCCGACAGCTTCAGAACCGCCGATCACTGCATTTTCCGGCAGCGATCGGAATCGGAAACCGAAAATT
AGGGCATTTATCGAGGACGAGGATGAATCTTTGGTCAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAAAAAAACGAGTATCTAGGCATGGTTTATGCCATGATCAGTATAGGTGTTCTTAGATTTCTTGTTTGGGCTCATCATATGTTTACTATGGGCTTAGACGTTGA
TACCCGTGCCTACTTCACCGTTGCTACCATGATCATAGCAGTCCTCACTAGAAACAAAATCTTTAGTTGGATCGCTACCATGGGGGAGGGGATGGCTCGAAACATAGAGA
CACAGAGACCAAATTCACATCTGAAGTTCCCGCCCCACCGCCTGCCGACAGCTTCAGAACCGCCGATCACTGCATTTTCCGGCAGCGATCGGAATCGGAAACCGAAAATT
AGGGCATTTATCGAGGACGAGGATGAATCTTTGGTCAACTAA
Protein sequenceShow/hide protein sequence
MKEKNEYLGMVYAMISIGVLRFLVWAHHMFTMGLDVDTRAYFTVATMIIAVLTRNKIFSWIATMGEGMARNIETQRPNSHLKFPPHRLPTASEPPITAFSGSDRNRKPKI
RAFIEDEDESLVN