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Clc09G01700 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G01700
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:1418084..1422489
RNA-Seq ExpressionClc09G01700
SyntenyClc09G01700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575397.1 hypothetical protein SDJN03_26036, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1060.29Show/hide
Query:  RAQSAVDPNWFRSHLQPS-PSRGEIIHLKSNVIVDRLLFKATLHQNKEISSSCCGFRVRLLDYPLSLM
        + +SAVDPNWFRS+LQPS PSRGEIIHLK+NVIVD LLF   L+Q+KEI+     F    +   L LM
Subjt:  RAQSAVDPNWFRSHLQPS-PSRGEIIHLKSNVIVDRLLFKATLHQNKEISSSCCGFRVRLLDYPLSLM
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGATTGAAGCGTCTAGGGATAATGGAAATGATTATAATAGTAAGGATCTCTTTGTAGATGCAGAGCTCGAAGGTGCGTTTCTGAGTTTGGAAGAAAACTGGAG
AATGGAAATGGGAGACACGCTGAAGGATGAGGCACGTCTGTCGCTGGTTTCTAGAACCTTCTCTCTTCTCTCTTCTCTCCGAGCTCAATCCGCCGTTGATCCCAATTGGT
TTAGATCGCATCTTCAACCCTCCCCTTCCCGAGGAGAGATCATCCACCTGAAAAGCAATGTGATCGTCGATCGTCTTCTTTTCAAAGCTACTTTGCATCAGAACAAGGAG
ATTTCATCATCGTGTTGCGGATTTCGTGTTCGTCTGTTGGATTATCCACTCTCTTTGATGGTAATTTCAACAAAATCTCAAATCTTCTTCTTATACCACCGTTCTCTTCT
GATCACTCCCTCTCCCTCTCTCTCCCCGAGCTTATTTTTTCCGCAAATGGAGGAAATTGACTTCTTCAACTCACTACACATTGCCATTGTGTTAGGCATAAAGAACTTTG
AACTATCAACTCGATATCCTCGTACGCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGATTGAAGCGTCTAGGGATAATGGAAATGATTATAATAGTAAGGATCTCTTTGTAGATGCAGAGCTCGAAGGTGCGTTTCTGAGTTTGGAAGAAAACTGGAG
AATGGAAATGGGAGACACGCTGAAGGATGAGGCACGTCTGTCGCTGGTTTCTAGAACCTTCTCTCTTCTCTCTTCTCTCCGAGCTCAATCCGCCGTTGATCCCAATTGGT
TTAGATCGCATCTTCAACCCTCCCCTTCCCGAGGAGAGATCATCCACCTGAAAAGCAATGTGATCGTCGATCGTCTTCTTTTCAAAGCTACTTTGCATCAGAACAAGGAG
ATTTCATCATCGTGTTGCGGATTTCGTGTTCGTCTGTTGGATTATCCACTCTCTTTGATGGTAATTTCAACAAAATCTCAAATCTTCTTCTTATACCACCGTTCTCTTCT
GATCACTCCCTCTCCCTCTCTCTCCCCGAGCTTATTTTTTCCGCAAATGGAGGAAATTGACTTCTTCAACTCACTACACATTGCCATTGTGTTAGGCATAAAGAACTTTG
AACTATCAACTCGATATCCTCGTACGCACTGA
Protein sequenceShow/hide protein sequence
MAEIEASRDNGNDYNSKDLFVDAELEGAFLSLEENWRMEMGDTLKDEARLSLVSRTFSLLSSLRAQSAVDPNWFRSHLQPSPSRGEIIHLKSNVIVDRLLFKATLHQNKE
ISSSCCGFRVRLLDYPLSLMVISTKSQIFFLYHRSLLITPSPSLSPSLFFPQMEEIDFFNSLHIAIVLGIKNFELSTRYPRTH