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Clc09G01880 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G01880
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionauxin-responsive protein SAUR71-like
Genome locationClcChr09:1553875..1554351
RNA-Seq ExpressionClc09G01880
SyntenyClc09G01880
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN45404.1 hypothetical protein Csa_015702 [Cucumis sativus]1.5e-5383.21Show/hide
Query:  ESKDCSKKSNKIREIVRLQQIVKKWKSLANGEK--RSSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGV
        ESK+C KKSNKIREIV+LQQIVKKWK LANGEK   SSNNK LKI+G WFT+GVPKGYLAVCVGKE+KRFVIPTHYLTH+AF+ILL+EAEEEFGF QQGV
Subjt:  ESKDCSKKSNKIREIVRLQQIVKKWKSLANGEK--RSSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGV

Query:  LQIPCHISVFEDILNTVQQSN-NYFAVPDNE
        LQIPCH+SVFEDILNTVQQ N N+FA  DNE
Subjt:  LQIPCHISVFEDILNTVQQSN-NYFAVPDNE

XP_004141833.2 auxin-responsive protein SAUR40 [Cucumis sativus]1.7e-5777.71Show/hide
Query:  ERIINWL-ERLQLCVMQCYVIMSPQEESKDCSKKSNKIREIVRLQQIVKKWKSLANGEK--RSSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPT
        ERIINW+ +RLQ+C    YV M    ESK+C KKSNKIREIV+LQQIVKKWK LANGEK   SSNNK LKI+G WFT+GVPKGYLAVCVGKE+KRFVIPT
Subjt:  ERIINWL-ERLQLCVMQCYVIMSPQEESKDCSKKSNKIREIVRLQQIVKKWKSLANGEK--RSSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPT

Query:  HYLTHQAFQILLREAEEEFGFQQQGVLQIPCHISVFEDILNTVQQSN-NYFAVPDNE
        HYLTH+AF+ILL+EAEEEFGF QQGVLQIPCH+SVFEDILNTVQQ N N+FA  DNE
Subjt:  HYLTHQAFQILLREAEEEFGFQQQGVLQIPCHISVFEDILNTVQQSN-NYFAVPDNE

XP_008462190.1 PREDICTED: auxin-responsive protein SAUR71-like [Cucumis melo]8.4e-5282.44Show/hide
Query:  ESKDCSKKSNKIREIVRLQQIVKKWKSLANGEK--RSSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGV
        ESK+  KKSNKIREIV+LQQIVKKWK LANGEK   SSNNK LK SGVWFT+GVPKGYLAVCVGKE+KRFVIPTHYLTH+AF+ILL+EAEEEFGF QQGV
Subjt:  ESKDCSKKSNKIREIVRLQQIVKKWKSLANGEK--RSSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGV

Query:  LQIPCHISVFEDILNTVQQSN-NYFAVPDNE
        LQIPCH+SVFEDILN VQQ N N+FA  DNE
Subjt:  LQIPCHISVFEDILNTVQQSN-NYFAVPDNE

XP_022991798.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]3.3e-4877.1Show/hide
Query:  EESKDCSKKSNKIREIVRLQQIVKKWKSLANGEKR--SSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQG
        EE  DC KKSNKIR+IVRLQQI+KKWK LANGEK     ++K LK SGV+ TE VPKGYLAVCVG+ELKRFVIPTHYLTHQAF+ILLREAEEEFGF QQG
Subjt:  EESKDCSKKSNKIREIVRLQQIVKKWKSLANGEKR--SSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQG

Query:  VLQIPCHISVFEDILNTVQQSNNYFAVPDNE
        VLQIPCH+SVF+DILN+VQ ++++FA PDNE
Subjt:  VLQIPCHISVFEDILNTVQQSNNYFAVPDNE

XP_038899517.1 auxin-responsive protein SAUR71-like [Benincasa hispida]1.9e-5686.67Show/hide
Query:  MSPQEESKDCSKKSNKIREIVRLQQIVKKWKSLANGEKRSSN-NKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQ
        MSPQEESKDC KKSNKIREIVRLQQIVKKWK LANGEK SSN +K LKISGVW T+ VPKGYLAVCVGKELKRFVIPTHYLTHQAF+ILL+EAEEEFGF 
Subjt:  MSPQEESKDCSKKSNKIREIVRLQQIVKKWKSLANGEKRSSN-NKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQ

Query:  QQGVLQIPCHISVFEDILNTVQQSN-NYFAVPDNE
        QQGVLQIPCH+SVFEDILNTVQQ N N FA  DNE
Subjt:  QQGVLQIPCHISVFEDILNTVQQSN-NYFAVPDNE

TrEMBL top hitse value%identityAlignment
A0A0A0K973 Uncharacterized protein7.4e-5483.21Show/hide
Query:  ESKDCSKKSNKIREIVRLQQIVKKWKSLANGEK--RSSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGV
        ESK+C KKSNKIREIV+LQQIVKKWK LANGEK   SSNNK LKI+G WFT+GVPKGYLAVCVGKE+KRFVIPTHYLTH+AF+ILL+EAEEEFGF QQGV
Subjt:  ESKDCSKKSNKIREIVRLQQIVKKWKSLANGEK--RSSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGV

Query:  LQIPCHISVFEDILNTVQQSN-NYFAVPDNE
        LQIPCH+SVFEDILNTVQQ N N+FA  DNE
Subjt:  LQIPCHISVFEDILNTVQQSN-NYFAVPDNE

A0A1S3CHW6 auxin-responsive protein SAUR71-like4.1e-5282.44Show/hide
Query:  ESKDCSKKSNKIREIVRLQQIVKKWKSLANGEK--RSSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGV
        ESK+  KKSNKIREIV+LQQIVKKWK LANGEK   SSNNK LK SGVWFT+GVPKGYLAVCVGKE+KRFVIPTHYLTH+AF+ILL+EAEEEFGF QQGV
Subjt:  ESKDCSKKSNKIREIVRLQQIVKKWKSLANGEK--RSSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGV

Query:  LQIPCHISVFEDILNTVQQSN-NYFAVPDNE
        LQIPCH+SVFEDILN VQQ N N+FA  DNE
Subjt:  LQIPCHISVFEDILNTVQQSN-NYFAVPDNE

A0A5A7UVZ8 Auxin-responsive protein SAUR71-like4.1e-5282.44Show/hide
Query:  ESKDCSKKSNKIREIVRLQQIVKKWKSLANGEK--RSSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGV
        ESK+  KKSNKIREIV+LQQIVKKWK LANGEK   SSNNK LK SGVWFT+GVPKGYLAVCVGKE+KRFVIPTHYLTH+AF+ILL+EAEEEFGF QQGV
Subjt:  ESKDCSKKSNKIREIVRLQQIVKKWKSLANGEK--RSSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGV

Query:  LQIPCHISVFEDILNTVQQSN-NYFAVPDNE
        LQIPCH+SVFEDILN VQQ N N+FA  DNE
Subjt:  LQIPCHISVFEDILNTVQQSN-NYFAVPDNE

A0A6J1GQ11 auxin-responsive protein SAUR50-like1.1e-4472.52Show/hide
Query:  DCSKKSNKIREIVRLQQIVKKWKSLANGEKR------SSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQG
        DC KKSNKIR+IVRLQQI+K+WK LANGEK         N+K LK +G + TE VPKGYLAVCVG+E KRFVIPTHYLTHQAF+ILLREAEEEFGF QQG
Subjt:  DCSKKSNKIREIVRLQQIVKKWKSLANGEKR------SSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQG

Query:  VLQIPCHISVFEDILNTVQQSNNYFAVPDNE
        VLQIPCH+SVF+DILN+VQ +++ F+ PDNE
Subjt:  VLQIPCHISVFEDILNTVQQSNNYFAVPDNE

A0A6J1JXB0 auxin-responsive protein SAUR50-like1.6e-4877.1Show/hide
Query:  EESKDCSKKSNKIREIVRLQQIVKKWKSLANGEKR--SSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQG
        EE  DC KKSNKIR+IVRLQQI+KKWK LANGEK     ++K LK SGV+ TE VPKGYLAVCVG+ELKRFVIPTHYLTHQAF+ILLREAEEEFGF QQG
Subjt:  EESKDCSKKSNKIREIVRLQQIVKKWKSLANGEKR--SSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQG

Query:  VLQIPCHISVFEDILNTVQQSNNYFAVPDNE
        VLQIPCH+SVF+DILN+VQ ++++FA PDNE
Subjt:  VLQIPCHISVFEDILNTVQQSNNYFAVPDNE

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR506.7e-1235.45Show/hide
Query:  KKSNKIREIVRLQQIVKKWKSLANGEKRSSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGVLQIPCHIS
        KK++K+ +   L+QI+K+  SL        +   L +        VPKG+  V VG+   R+++P  +LTH  FQ LL+ AEEEFGF     L IPC   
Subjt:  KKSNKIREIVRLQQIVKKWKSLANGEKRSSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGVLQIPCHIS

Query:  VFEDILNTVQ
        VF+ + + ++
Subjt:  VFEDILNTVQ

P33081 Auxin-induced protein 15A4.4e-1160Show/hide
Query:  PKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQ-QGVLQIPCHISVFEDI
        PKGYLAV VG++LKRFVIP  YL   +FQ LL +AEEEFG+    G L IPC   VF+ I
Subjt:  PKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQ-QGVLQIPCHISVFEDI

P33082 Auxin-induced protein X159.7e-1156.67Show/hide
Query:  PKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQ-QGVLQIPCHISVFEDI
        PKGYLAV VG+++KRFVIP  Y+   +FQ LL +AEEEFG+    G L IPC   VF+ I
Subjt:  PKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQ-QGVLQIPCHISVFEDI

Q9LTV3 Auxin-responsive protein SAUR722.3e-1245.59Show/hide
Query:  TEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGVLQIPCHISVFEDILNTVQ
        T  VP+G++ V VG E++RFV+    L H  F  LL  + +E+G++Q+GVLQIPCH+ VFE I+ +++
Subjt:  TEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGVLQIPCHISVFEDILNTVQ

Q9SGU2 Auxin-responsive protein SAUR711.0e-1247.69Show/hide
Query:  VPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGVLQIPCHISVFEDILNTVQ
        VP+G++ V VG E++RFV+    L H  F  LL+++ +E+G++QQGVL+IPCH+ VFE IL +++
Subjt:  VPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEEFGFQQQGVLQIPCHISVFEDILNTVQ

Arabidopsis top hitse value%identityAlignment
AT2G24400.1 SAUR-like auxin-responsive protein family2.1e-3255.22Show/hide
Query:  SKKSNKIREIVRLQQIVKKWKSLANGEKRSSNN-----------KSLKI--SGVWFTE--GVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEE
        +KKSNKIREIV+LQQ++KKW+  A   K ++NN           KS+K     + FT+   VPKGYLAV VG E KR+ IPT YL+HQAF +LLREAEEE
Subjt:  SKKSNKIREIVRLQQIVKKWKSLANGEKRSSNN-----------KSLKI--SGVWFTE--GVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILLREAEEE

Query:  FGFQQQGVLQIPCHISVFEDILNTVQQSNNYFAV
        FGFQQ GVL+IPC +SVFE IL  +++ N  + V
Subjt:  FGFQQQGVLQIPCHISVFEDILNTVQQSNNYFAV

AT3G43120.1 SAUR-like auxin-responsive protein family2.9e-1836.03Show/hide
Query:  KSNKIREIVRLQQIVKKWKSLANGEKRSS----------------NNKSLKISGVWFTE-----------GVPKGYLAVCVGKELKRFVIPTHYLTHQAF
        K   I++IVRL++I++KW+++  G K                   N + L +      E            VPKGYLAV VG EL+RF+IPT++L+H  F
Subjt:  KSNKIREIVRLQQIVKKWKSLANGEKRSS----------------NNKSLKISGVWFTE-----------GVPKGYLAVCVGKELKRFVIPTHYLTHQAF

Query:  QILLREAEEEFGFQQQGVLQIPCHISVFEDILNTVQ
        ++LL +AEEE+GF   G L IPC +  F+ +L  ++
Subjt:  QILLREAEEEFGFQQQGVLQIPCHISVFEDILNTVQ

AT4G31320.1 SAUR-like auxin-responsive protein family8.7e-3147.95Show/hide
Query:  SKKSNKIREIVRLQQIVKKWKSLANGEKRSSNNK-----------SLKISG------------------VWFTE--GVPKGYLAVCVGKELKRFVIPTHY
        +KKSNKIREIV+LQQI+KKW+ +A+  K+++NNK           S+ I+                   + FT+   +PKGYLAV VGKE KR+ IPT Y
Subjt:  SKKSNKIREIVRLQQIVKKWKSLANGEKRSSNNK-----------SLKISG------------------VWFTE--GVPKGYLAVCVGKELKRFVIPTHY

Query:  LTHQAFQILLREAEEEFGFQQQGVLQIPCHISVFEDILNTVQQSNN
        L+HQAF +LLREAEEEFGF+Q G+L+IPC ++VFE IL  ++ + +
Subjt:  LTHQAFQILLREAEEEFGFQQQGVLQIPCHISVFEDILNTVQQSNN

AT5G20810.1 SAUR-like auxin-responsive protein family1.0e-1836.73Show/hide
Query:  KSNKIREIVRLQQIVKKWKSLANGEKR-----------------SSNNKSLKISGVWFTE----------GVPKGYLAVCVGKELKRFVIPTHYLTHQAF
        K   IR+IVRL++I++KW+++  G K                  + N + L +      E           VPKG LAV VG EL+RF+IPT YL+H  F
Subjt:  KSNKIREIVRLQQIVKKWKSLANGEKR-----------------SSNNKSLKISGVWFTE----------GVPKGYLAVCVGKELKRFVIPTHYLTHQAF

Query:  QILLREAEEEFGFQQQGVLQIPCHISVFEDILNTVQQSNNYFAVPDN
        ++LL +AEEEFGF Q G L IPC +  F+ +L  ++ +       DN
Subjt:  QILLREAEEEFGFQQQGVLQIPCHISVFEDILNTVQQSNNYFAVPDN

AT5G20810.2 SAUR-like auxin-responsive protein family2.0e-1936.91Show/hide
Query:  KSNKIREIVRLQQIVKKWKSLANGEKR-----------------SSNNKSLKISGVWFTE----------GVPKGYLAVCVGKELKRFVIPTHYLTHQAF
        K   IR+IVRL++I++KW+++  G K                  + N + L +      E           VPKG LAV VG EL+RF+IPT YL+H  F
Subjt:  KSNKIREIVRLQQIVKKWKSLANGEKR-----------------SSNNKSLKISGVWFTE----------GVPKGYLAVCVGKELKRFVIPTHYLTHQAF

Query:  QILLREAEEEFGFQQQGVLQIPCHISVFEDILNTVQQSNNYFAVPDNEG
        ++LL +AEEEFGF Q G L IPC +  F+ +L  ++ +       DN G
Subjt:  QILLREAEEEFGFQQQGVLQIPCHISVFEDILNTVQQSNNYFAVPDNEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAATTATAAATTGGCTGGAGAGGCTTCAATTATGTGTAATGCAATGCTATGTAATAATGAGCCCTCAAGAGGAATCAAAGGACTGTTCAAAGAAGTCAAACAA
AATCAGAGAGATTGTAAGGCTTCAACAAATAGTGAAGAAGTGGAAGAGCTTAGCAAATGGTGAAAAGAGAAGCAGCAACAATAAATCCTTAAAGATAAGTGGGGTTTGGT
TTACAGAGGGTGTTCCAAAAGGATATTTGGCAGTGTGTGTGGGGAAAGAGCTTAAGAGATTTGTAATTCCCACCCATTACCTCACTCACCAAGCATTCCAAATATTACTG
CGGGAAGCTGAGGAAGAATTCGGTTTTCAACAACAAGGTGTTCTTCAGATTCCATGTCATATATCTGTCTTTGAAGATATCCTCAACACCGTCCAACAAAGCAATAACTA
TTTTGCTGTTCCAGATAATGAAGGTCCCATTTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAATTATAAATTGGCTGGAGAGGCTTCAATTATGTGTAATGCAATGCTATGTAATAATGAGCCCTCAAGAGGAATCAAAGGACTGTTCAAAGAAGTCAAACAA
AATCAGAGAGATTGTAAGGCTTCAACAAATAGTGAAGAAGTGGAAGAGCTTAGCAAATGGTGAAAAGAGAAGCAGCAACAATAAATCCTTAAAGATAAGTGGGGTTTGGT
TTACAGAGGGTGTTCCAAAAGGATATTTGGCAGTGTGTGTGGGGAAAGAGCTTAAGAGATTTGTAATTCCCACCCATTACCTCACTCACCAAGCATTCCAAATATTACTG
CGGGAAGCTGAGGAAGAATTCGGTTTTCAACAACAAGGTGTTCTTCAGATTCCATGTCATATATCTGTCTTTGAAGATATCCTCAACACCGTCCAACAAAGCAATAACTA
TTTTGCTGTTCCAGATAATGAAGGTCCCATTTGGTAA
Protein sequenceShow/hide protein sequence
MERIINWLERLQLCVMQCYVIMSPQEESKDCSKKSNKIREIVRLQQIVKKWKSLANGEKRSSNNKSLKISGVWFTEGVPKGYLAVCVGKELKRFVIPTHYLTHQAFQILL
REAEEEFGFQQQGVLQIPCHISVFEDILNTVQQSNNYFAVPDNEGPIW