; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G01960 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G01960
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptioncytochrome c oxidase assembly protein COX19-like
Genome locationClcChr09:1621989..1624835
RNA-Seq ExpressionClc09G01960
SyntenyClc09G01960
Gene Ontology termsNA
InterPro domainsIPR010625 - CHCH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593473.1 hypothetical protein SDJN03_12949, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4595.79Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL+CRMEKNLMAKQDM ELGFGNLSQ SLSGDKL+QV
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV

KAG7025816.1 COX19-2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-4595.79Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL+CRMEKNLMAKQDM ELGFGNLSQ SLSGDKL+QV
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV

XP_004141761.1 cytochrome c oxidase assembly protein COX19 [Cucumis sativus]1.9e-4594.74Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGH+SEKCRHLSK+YLECRMEKNLMAKQDMTELGFGNLSQA+LSGDKL+Q+
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV

XP_022964209.1 cytochrome c oxidase assembly protein COX19-like isoform X2 [Cucurbita moschata]1.9e-4595.79Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL+CRMEKNLMAKQDM ELGFGNLSQ SLSGDKL+QV
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV

XP_038899996.1 cytochrome c oxidase assembly protein COX19-like [Benincasa hispida]1.9e-4596.84Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYL+CLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFG LSQASLSGDKL+QV
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV

TrEMBL top hitse value%identityAlignment
A0A1S3CGW0 cytochrome c oxidase assembly protein COX19-like3.4e-4593.68Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGH+SEKCRHLSKKYLECRMEKNLMAKQDMTELGFG++SQA+LSGDKL+Q+
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV

A0A5A7UTU4 Cytochrome c oxidase assembly protein COX19-like3.4e-4593.68Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGH+SEKCRHLSKKYLECRMEKNLMAKQDMTELGFG++SQA+LSGDKL+Q+
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV

A0A6J1HK56 cytochrome c oxidase assembly protein COX19-like isoform X11.3e-4491.84Show/hide
Query:  VSTMSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV
        VS    GGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL+CRMEKNLMAKQDM ELGFGNLSQ SLSGDKL+QV
Subjt:  VSTMSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV

A0A6J1HMG5 cytochrome c oxidase assembly protein COX19-like isoform X29.1e-4695.79Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL+CRMEKNLMAKQDM ELGFGNLSQ SLSGDKL+QV
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV

A0A6J1KFT4 cytochrome c oxidase assembly protein COX19-like isoform X23.4e-4594.74Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL+CRMEKNLMAKQDM ELGFGNLSQ SL GDKL+QV
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV

SwissProt top hitse value%identityAlignment
A8E4L1 Cytochrome c oxidase assembly protein COX196.1e-1545.12Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNL
        MS   +F G++  +P PP+KG FPLDH   C   K++++ CL+ +  ++  CR+ SK+YLECRME+ LMA++ + +LGFG+L
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNL

O14056 Cytochrome c oxidase assembly protein cox19, mitochondrial8.8e-1446.67Show/hide
Query:  SFGGNRGLRPV----PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGF---GNLSQASLS
        SFG   G  P+    PPE+G FPLDH   C    K+YL C+K      E+CR L+KKYL+CRM+  L  K DM  LGF    N +  SLS
Subjt:  SFGGNRGLRPV----PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGF---GNLSQASLS

P0CT19 Cytochrome c oxidase assembly protein COX192.0e-1343.48Show/hide
Query:  MSA-GGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCL-KTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGD
        MSA GG  GG    +P+PP++G FPLDH   C      YL C+ K  G    +CR  +K YL CRM+ NLMA+ +   LGF ++  +S  GD
Subjt:  MSA-GGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCL-KTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGD

Q49B96 Cytochrome c oxidase assembly protein COX194.0e-1440.66Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDK
        MS   +F G +  +P PP+KG FPLDH+  C   K++++ CL  +  ++  CR  SK+YLECRME+ LM ++ + +LGFG+L+       K
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDK

Q4P821 Cytochrome c oxidase assembly protein COX192.0e-1352.38Show/hide
Query:  PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGF
        PPE+G FPLDH   C    +EY+NC+K + + + KCRHLS+ YL+CRM+K LM + +M  LGF
Subjt:  PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGF

Arabidopsis top hitse value%identityAlignment
AT1G66590.1 cytochrome c oxidase 19-11.7e-3672.53Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDK
        MS GG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYL+CRM KNLMAKQDM ELGF  + +   + DK
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDK

AT1G66590.2 cytochrome c oxidase 19-12.9e-3668Show/hide
Query:  FELSGVS-TMSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDK
        F+L+  S +  AGG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYL+CRM KNLMAKQDM ELGF  + +   + DK
Subjt:  FELSGVS-TMSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDK

AT1G69750.1 cytochrome c oxidase 19-21.7e-3672.53Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDK
        MS GG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYL+CRM KNLMAKQDM ELGF  + +   + DK
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAATTTGTCCCTTTCGTTTAAAGCAGCAGCATTTCACGCCGCTGCCCGCTGCAAAGCTTCCTCTGTGATCTTCCCGGCCGGTTTCAGGTTTCGACTTGACGGTCC
GTATGAGACGAATGAAAATTTCTTTTTCGAGCTATCGGGAGTTTCCACAATGAGTGCAGGTGGTTCATTTGGAGGGAATAGAGGACTGAGACCGGTGCCCCCAGAGAAAG
GAGTCTTCCCTTTGGACCATATGCACCTCTGCGACCTGGAGAAGAAAGAATACCTCAATTGTCTCAAAACCTCTGGTCACCAATCTGAAAAGTGCAGGCACTTATCAAAA
AAATACCTTGAATGCCGTATGGAGAAGAATTTAATGGCAAAGCAAGACATGACGGAGCTAGGATTTGGAAATTTGAGTCAGGCCAGTTTGTCTGGTGATAAATTGGATCA
AGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAATTTGTCCCTTTCGTTTAAAGCAGCAGCATTTCACGCCGCTGCCCGCTGCAAAGCTTCCTCTGTGATCTTCCCGGCCGGTTTCAGGTTTCGACTTGACGGTCC
GTATGAGACGAATGAAAATTTCTTTTTCGAGCTATCGGGAGTTTCCACAATGAGTGCAGGTGGTTCATTTGGAGGGAATAGAGGACTGAGACCGGTGCCCCCAGAGAAAG
GAGTCTTCCCTTTGGACCATATGCACCTCTGCGACCTGGAGAAGAAAGAATACCTCAATTGTCTCAAAACCTCTGGTCACCAATCTGAAAAGTGCAGGCACTTATCAAAA
AAATACCTTGAATGCCGTATGGAGAAGAATTTAATGGCAAAGCAAGACATGACGGAGCTAGGATTTGGAAATTTGAGTCAGGCCAGTTTGTCTGGTGATAAATTGGATCA
AGTCTAAATTGTTCTTCCATAAATAACCGTGATCGAAGTTTTTAGTTAGTCACAAGGTCAAGTTATCATTAACC
Protein sequenceShow/hide protein sequence
MPNLSLSFKAAAFHAAARCKASSVIFPAGFRFRLDGPYETNENFFFELSGVSTMSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSK
KYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV