; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G02010 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G02010
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein UXT homolog
Genome locationClcChr09:1642859..1646406
RNA-Seq ExpressionClc09G02010
SyntenyClc09G02010
Gene Ontology termsGO:0000122 - negative regulation of transcription by RNA polymerase II (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0000785 - chromatin (cellular component)
GO:0016592 - mediator complex (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR004127 - Prefoldin alpha-like
IPR009053 - Prefoldin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141760.1 protein UXT homolog [Cucumis sativus]1.5e-7495.48Show/hide
Query:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        MDV  DNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKN ITN+RTLVNLGSEVYVQGDVPDTRSIFVD+GLGFHVEFTWS
Subjt:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF
        EALKFISLKEERL RQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVE RVF
Subjt:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF

XP_008462175.1 PREDICTED: protein UXT homolog [Cucumis melo]1.8e-7596.13Show/hide
Query:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        MDVG D+FR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKN ITNLRTLVNLGSEVYVQGDVPDTRSIFVD+GLGFHVEFTWS
Subjt:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF
        EALKFISLKEERL RQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF
Subjt:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF

XP_022159095.1 protein UXT homolog [Momordica charantia]2.0e-7494.19Show/hide
Query:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        M+VG DNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKN ITNLRTLVNLGSEVYVQGDVPDTRSIFVD+GLGFHVEFTWS
Subjt:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF
        EAL FISL+EERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAER+VEG VF
Subjt:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF

XP_022992427.1 protein UXT homolog [Cucurbita maxima]1.4e-7293.55Show/hide
Query:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        MDVGIDNFR+EKVQRFEEFVDRRLKPDLVHAI+ERDKVFEQQKVFSDLRRNIENLEKN ITNL TLVNLGSEVYVQG+V DTR IFVDVGLGFHVEFTWS
Subjt:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF
        EALKFISLKEERLARQ EEYT LIASIKAQIKLVCEGIRELLQLPAE+TVEGRVF
Subjt:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF

XP_038897562.1 protein UXT homolog [Benincasa hispida]2.0e-7494.84Show/hide
Query:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        MD GIDNFR+EKV+RFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKN ITNLR LVNLGSEVY QGDVPDTRSIFVDVGLGFHVEFTWS
Subjt:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF
        EALKF+SLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERT+EGRVF
Subjt:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF

TrEMBL top hitse value%identityAlignment
A0A0A0K7F1 Uncharacterized protein7.4e-7595.48Show/hide
Query:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        MDV  DNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKN ITN+RTLVNLGSEVYVQGDVPDTRSIFVD+GLGFHVEFTWS
Subjt:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF
        EALKFISLKEERL RQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVE RVF
Subjt:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF

A0A1S3CHV4 protein UXT homolog8.8e-7696.13Show/hide
Query:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        MDVG D+FR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKN ITNLRTLVNLGSEVYVQGDVPDTRSIFVD+GLGFHVEFTWS
Subjt:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF
        EALKFISLKEERL RQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF
Subjt:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF

A0A5D3BXW7 Protein UXT-like protein8.8e-7696.13Show/hide
Query:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        MDVG D+FR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKN ITNLRTLVNLGSEVYVQGDVPDTRSIFVD+GLGFHVEFTWS
Subjt:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF
        EALKFISLKEERL RQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF
Subjt:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF

A0A6J1E2W3 protein UXT homolog9.7e-7594.19Show/hide
Query:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        M+VG DNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKN ITNLRTLVNLGSEVYVQGDVPDTRSIFVD+GLGFHVEFTWS
Subjt:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF
        EAL FISL+EERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAER+VEG VF
Subjt:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF

A0A6J1JPT0 protein UXT homolog7.0e-7393.55Show/hide
Query:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS
        MDVGIDNFR+EKVQRFEEFVDRRLKPDLVHAI+ERDKVFEQQKVFSDLRRNIENLEKN ITNL TLVNLGSEVYVQG+V DTR IFVDVGLGFHVEFTWS
Subjt:  MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWS

Query:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF
        EALKFISLKEERLARQ EEYT LIASIKAQIKLVCEGIRELLQLPAE+TVEGRVF
Subjt:  EALKFISLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF

SwissProt top hitse value%identityAlignment
A7T0W1 Protein UXT homolog1.6e-1839.1Show/hide
Query:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCI--TNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISL
        EK++++EEF+D+RL  DL      +D++  +   ++ L+ +IE ++K  +   +LR+ V+LG   + Q  VPD   IF+ VG GF VEFT SEAL FI  
Subjt:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCI--TNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISL

Query:  KEERLARQIEEYTQLIASIKAQIKLVCEGIREL
        K   L   +++  +  A IKA +KLV  G++EL
Subjt:  KEERLARQIEEYTQLIASIKAQIKLVCEGIREL

Q32P97 Protein UXT3.1e-1741.22Show/hide
Query:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKE
        EKV R+E F+   L+ DL   +  RDKV+EQ   +  LR  IE L++   + L   V+LG   +V   VPDT  I+V +G GF +E T +EALKFI  K 
Subjt:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKE

Query:  ERLARQIEEYTQLIASIKAQIKLVCEGIREL
          L    +  T+   +IKA I ++ EG+REL
Subjt:  ERLARQIEEYTQLIASIKAQIKLVCEGIREL

Q54ND3 Protein UXT homolog8.3e-2341.18Show/hide
Query:  RHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISL
        R + ++ +E F++  L  DL  +I +R+KV E  + + +L+ NIE L +N + +++T++NLGSE YV+  V DT  I+VD+GLG HV++T  EA+KFI+ 
Subjt:  RHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISL

Query:  KEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQL
        KE  L + +E  T+ I  IK +I L+  G++EL  L
Subjt:  KEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQL

Q63ZY7 Protein UXT2.8e-1841.98Show/hide
Query:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKE
        EKV R+E F+   L+ DL   +  RDKV+EQ  V+  LR  IE L++   + L   V+LG   +V   VPDT  I+V +G GF +E T +EALKFI  K 
Subjt:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKE

Query:  ERLARQIEEYTQLIASIKAQIKLVCEGIREL
          L    +  T+   +IKA I ++ EG+REL
Subjt:  ERLARQIEEYTQLIASIKAQIKLVCEGIREL

Q9WTZ0 Protein UXT2.8e-1841.98Show/hide
Query:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKE
        EKV R+E F+   L+ DL   +  RDKV+EQ  V+  LR  IE L++   + L   V+LG   +V   VPDT  I+V +G GF +E T +EALKFI  K 
Subjt:  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKE

Query:  ERLARQIEEYTQLIASIKAQIKLVCEGIREL
          L    +  T+   +IKA I ++ EG+REL
Subjt:  ERLARQIEEYTQLIASIKAQIKLVCEGIREL

Arabidopsis top hitse value%identityAlignment
AT1G26660.1 Prefoldin chaperone subunit family protein1.3e-3957.55Show/hide
Query:  RHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISL
        R + +Q  EE +D+ LK  LVHA A RDK+FE+QK  SDLR+N+E LEKN + +L+T VNLGSEVY+Q +VPDTR IF+DVGLGF+VEFT  EAL +I+ 
Subjt:  RHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISL

Query:  KEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAE
        +EER  +Q+EEYT +I  IK +IKL    I+++L LP E
Subjt:  KEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAE

AT1G26660.2 Prefoldin chaperone subunit family protein8.0e-2949.65Show/hide
Query:  FRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVF-SDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFI
        FR   V  F  F   R   +  H I     ++ +   F SDLR+N+E LEKN + +L+T VNLGSEVY+Q +VPDTR IF+DVGLGF+VEFT  EAL +I
Subjt:  FRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVF-SDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFI

Query:  SLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAE
        + +EER  +Q+EEYT +I  IK +IKL    I+++L LP E
Subjt:  SLKEERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTAGGAATTGATAACTTTCGGCATGAGAAAGTTCAAAGGTTTGAGGAATTTGTTGACCGTCGCTTGAAACCTGATTTGGTGCATGCAATCGCTGAAAGGGATAA
AGTGTTTGAGCAGCAGAAAGTGTTTTCGGACCTTCGTCGGAACATTGAGAATTTGGAGAAAAATTGTATAACTAATCTCAGAACGTTGGTCAATCTTGGCTCTGAAGTCT
ATGTACAAGGCGATGTGCCAGATACACGAAGTATATTTGTAGACGTTGGGCTTGGTTTTCATGTCGAGTTCACATGGTCAGAAGCTTTAAAATTCATTTCTCTCAAAGAA
GAAAGGTTAGCCAGACAGATAGAAGAGTACACTCAATTAATTGCATCAATTAAAGCGCAGATCAAGTTGGTTTGTGAAGGGATTCGTGAATTATTACAACTTCCAGCAGA
GAGGACTGTCGAAGGACGTGTATTTTGA
mRNA sequenceShow/hide mRNA sequence
TAGCTTGCAACATTGAAATTTACAATTTTAAAAATGAAGTTACAACTTAGAAGGAATTTAAATTTCAGCCAACTTAAATAGCCTTAGCCTTAACTTTATTTACAAATATT
TGACTCACAAGTAAAAAGCCCTAGAAACCAATTCCGCCTCCATTTTCAACACTGCCGCTGCGGCTTAACGTTGTTGCCGTTAGCTCCACTCCCCTCTCCCGCTCACCTCG
ATGGCTCCGTTCCTCCCATTCGCCGACGCCGTTGCGCTCCATCTCTAACAAATTCCCTACCAACCCAACTGAATTGGTGATAGAAGTTTTGCCACTTTGTTGTTCATAAC
TATTTTAGAACACCCACAAGGCTGTCACGTTCAGTTGTTATTTATTGATCATGGATGTAGGAATTGATAACTTTCGGCATGAGAAAGTTCAAAGGTTTGAGGAATTTGTT
GACCGTCGCTTGAAACCTGATTTGGTGCATGCAATCGCTGAAAGGGATAAAGTGTTTGAGCAGCAGAAAGTGTTTTCGGACCTTCGTCGGAACATTGAGAATTTGGAGAA
AAATTGTATAACTAATCTCAGAACGTTGGTCAATCTTGGCTCTGAAGTCTATGTACAAGGCGATGTGCCAGATACACGAAGTATATTTGTAGACGTTGGGCTTGGTTTTC
ATGTCGAGTTCACATGGTCAGAAGCTTTAAAATTCATTTCTCTCAAAGAAGAAAGGTTAGCCAGACAGATAGAAGAGTACACTCAATTAATTGCATCAATTAAAGCGCAG
ATCAAGTTGGTTTGTGAAGGGATTCGTGAATTATTACAACTTCCAGCAGAGAGGACTGTCGAAGGACGTGTATTTTGAGTTTCGTTCCGGATGGTTCCTGCTTTCCTGGG
GATGAAGATGGTCCTGAATCAGTGTATAAAATCCTAAATTTTTATGCTCTTTATTGACTTGTTCATCTTTTAGAACTTTATGAAAAGTACCACCTTACTTTTTGTCATTG
CATTGATTATTTATGCTTCTCAAAATCTAGTGTTTCTTCTGTGAGTCAATGCCCCCATCACTTAATGGTTGGTAATTCACGCCAAATTGAGTGGTAATTAGTATGATCTT
CAATTTTAGAGGTAGCAGGTTCAATCTTCCATCCCATTATACT
Protein sequenceShow/hide protein sequence
MDVGIDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNCITNLRTLVNLGSEVYVQGDVPDTRSIFVDVGLGFHVEFTWSEALKFISLKE
ERLARQIEEYTQLIASIKAQIKLVCEGIRELLQLPAERTVEGRVF