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Clc09G02190 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G02190
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibosomal protein L37
Genome locationClcChr09:1775875..1777207
RNA-Seq ExpressionClc09G02190
SyntenyClc09G02190
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001569 - Ribosomal protein L37e
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein
IPR018267 - Ribosomal protein L37e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFK47939.1 unknown [Lotus japonicus]1.3e-4498.95Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAA+A
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

AFK48222.1 unknown [Lotus japonicus]1.3e-44100Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAAS
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAAS
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAAS

XP_004141772.1 60S ribosomal protein L37-3 [Cucumis sativus]2.3e-4498.95Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLR+VPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

XP_020202820.1 60S ribosomal protein L37-3 [Cajanus cajan]6.6e-4497.89Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPR KGAAA+A
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

XP_022964011.1 60S ribosomal protein L37-3-like [Cucurbita moschata]8.6e-4496.84Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAARKRKYNWSVKAIRRKTTGTGRMRY+R+VPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

TrEMBL top hitse value%identityAlignment
A0A0A0K941 Ribosomal protein L371.1e-4498.95Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLR+VPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

A0A1S3CGU0 Ribosomal protein L371.1e-4498.95Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLR+VPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

A0A5D3BYC5 Ribosomal protein L371.1e-4498.95Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLR+VPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

I3T5Z7 Ribosomal protein L376.4e-4598.95Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAA+A
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

I3T6T0 Ribosomal protein L376.4e-45100Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAAS
        MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAAS
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAAS

SwissProt top hitse value%identityAlignment
Q43292 60S ribosomal protein L37-24.4e-4389.47Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        M KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFREGTEA PRNKG A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

Q8LEM8 60S ribosomal protein L37-37.6e-4388.42Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFREGTEA PR+K +A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

Q8LFH7 60S ribosomal protein L37-13.8e-4287.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLRNVPRRFK+ FREGT+A PRNK AA+S+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

Q90YT1 60S ribosomal protein L371.3e-2967.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        M KGT SFGKRRNKTHTLC RCG +++HLQKS C  C +PA RKRKYNWS KA RR TTGTGRMR+++ V RRF++GFREGT   PR    AAS+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

Q9VXX8 Probable 60S ribosomal protein L37-A1.3e-2968.48Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAA
        M KGT SFGKR NKTHTLC RCGR S+H+QKS CA C +PAA+ R YNWSVKA RRKTTGTGRM++L+ V RRF++GFREGT+A P+   A+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAA

Arabidopsis top hitse value%identityAlignment
AT1G15250.1 Zinc-binding ribosomal protein family protein2.7e-4387.37Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLRNVPRRFK+ FREGT+A PRNK AA+S+
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

AT1G52300.1 Zinc-binding ribosomal protein family protein3.2e-4489.47Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        M KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFREGTEA PRNKG A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA

AT3G16080.1 Zinc-binding ribosomal protein family protein5.4e-4488.42Show/hide
Query:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA
        MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAARKR YNWSVKAIRRKTTGTGRMRYLRNVPRRFK+GFREGTEA PR+K +A+SA
Subjt:  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGGGTACGGGCAGTTTTGGTAAGAGGAGGAACAAGACCCATACTCTCTGTGTGAGGTGTGGCCGCCGCAGCTTCCATCTCCAGAAGAGTCGCTGTGCAGCCTG
TGCTTTCCCTGCTGCTCGCAAGCGAAAATATAACTGGAGTGTGAAGGCAATTAGGAGAAAGACAACTGGAACTGGAAGAATGAGGTACTTGCGCAATGTTCCGCGTAGAT
TCAAGAGCGGCTTCAGAGAGGGTACTGAAGCTGCACCCAGGAATAAAGGAGCAGCAGCATCAGCATAA
mRNA sequenceShow/hide mRNA sequence
CTAAACTCTGTCTTTCGGTCATATAAAAGGGCCATTTTCCTTGCTGCTATCCCCATAGCCAAACTGCAGATAGAATTCCTCCTCCCTAGGGTTTCTTCGTCCTGCAGCAA
TGGGAAAGGGTACGGGCAGTTTTGGTAAGAGGAGGAACAAGACCCATACTCTCTGTGTGAGGTGTGGCCGCCGCAGCTTCCATCTCCAGAAGAGTCGCTGTGCAGCCTGT
GCTTTCCCTGCTGCTCGCAAGCGAAAATATAACTGGAGTGTGAAGGCAATTAGGAGAAAGACAACTGGAACTGGAAGAATGAGGTACTTGCGCAATGTTCCGCGTAGATT
CAAGAGCGGCTTCAGAGAGGGTACTGAAGCTGCACCCAGGAATAAAGGAGCAGCAGCATCAGCATAAGTTTTTTGGAAGAAGTTCGACTTAATTTCAGTACCCAACTATA
GTTTTCAGTAGGGTTTTTACTCATCTGAGAATCATTTCATATAATTTTGTTTTCTAGTTTTGCCTTTTCATGATTTAGTTGAACGTGGTTTCCTTAAAATGTATTGTTTG
AATTGTGGACAAATGATGAATCAGATTTTTCGTATTCTGCTACTTGTTTATGCATTTAAGCATACGATATGGTTTTCAGTATCGAATATTAGAATCTGTTTTCCCACAGG
GAATCCCTGCTTGAAATGATAAATTTGCTTGCACTTTTCACCATAGCCCATGCCATCATCAACCAGCGTAACAATAATCTCTTGCTTCTTTCTCCTAAACTTCAGCCATT
GATCATGTTCATTACAGTGATCAACAATTCTTACAGTTTCT
Protein sequenceShow/hide protein sequence
MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRNKGAAASA