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Clc09G02295 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G02295
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionserine-rich protein-related
Genome locationClcChr09:1827319..1834105
RNA-Seq ExpressionClc09G02295
SyntenyClc09G02295
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7594965.1 hypothetical protein ISN45_Aa01g036900 [Arabidopsis thaliana x Arabidopsis arenosa]2.2e-0656.52Show/hide
Query:  KSGGDGGG--NKCICSPTTHPGSFRCRFHQRDYRWVSRSRFSKPHK
        +SGGDGGG   KC+CSP+ HP SF+CR+HQ +Y+W+  S  S  HK
Subjt:  KSGGDGGG--NKCICSPTTHPGSFRCRFHQRDYRWVSRSRFSKPHK

KAG8656900.1 hypothetical protein MANES_03G019500v8 [Manihot esculenta]7.7e-0763.64Show/hide
Query:  EVVRQQKSGGDGGGN--KCICSPTTHPGSFRCRFHQRDYRWVSR
        E  R + SGGDGGG+  KC+CSPT HPGSFRCR H  DY W  R
Subjt:  EVVRQQKSGGDGGGN--KCICSPTTHPGSFRCRFHQRDYRWVSR

KGN45357.1 hypothetical protein Csa_016243 [Cucumis sativus]4.1e-1668.18Show/hide
Query:  KATAFGFAGPGRPLVAPAQEVVRQQKSGGDGGGNKCICSPTTHPGSFRCRFHQRDYRWVSRSRFSK
        + TAF FA  GR +VA  +E VRQQ+S   GGG KCICSPTTHPGSF+CRFHQ DY+WVSRS  SK
Subjt:  KATAFGFAGPGRPLVAPAQEVVRQQKSGGDGGGNKCICSPTTHPGSFRCRFHQRDYRWVSRSRFSK

XP_002878690.2 uncharacterized protein LOC9316576 [Arabidopsis lyrata subsp. lyrata]2.2e-0649.12Show/hide
Query:  VAPAQEVVRQQKSGGDGGG--NKCICSPTTHPGSFRCRFHQRDYRWVSRSRFSKPHK
        VA   E     +SGGDGG    KC+CSP+ HP SF+CR+HQ +Y+W+  S  S  HK
Subjt:  VAPAQEVVRQQKSGGDGGG--NKCICSPTTHPGSFRCRFHQRDYRWVSRSRFSKPHK

XP_022846371.1 uncharacterized protein LOC111369102 [Olea europaea var. sylvestris]1.0e-0646.67Show/hide
Query:  AGPGRPLVAPAQ---------EVVRQQK----------SGGDGGG--NKCICSPTTHPGSFRCRFHQRDYRWVSR
        AGP R +V+P           EV RQQ+          SGG GGG   +C+CSPT HPGSFRCR H  +Y WV R
Subjt:  AGPGRPLVAPAQ---------EVVRQQK----------SGGDGGG--NKCICSPTTHPGSFRCRFHQRDYRWVSR

TrEMBL top hitse value%identityAlignment
A0A0A0KAE1 Uncharacterized protein2.0e-1668.18Show/hide
Query:  KATAFGFAGPGRPLVAPAQEVVRQQKSGGDGGGNKCICSPTTHPGSFRCRFHQRDYRWVSRSRFSK
        + TAF FA  GR +VA  +E VRQQ+S   GGG KCICSPTTHPGSF+CRFHQ DY+WVSRS  SK
Subjt:  KATAFGFAGPGRPLVAPAQEVVRQQKSGGDGGGNKCICSPTTHPGSFRCRFHQRDYRWVSRSRFSK

A0A2C9W3Q9 Uncharacterized protein3.7e-0763.64Show/hide
Query:  EVVRQQKSGGDGGGN--KCICSPTTHPGSFRCRFHQRDYRWVSR
        E  R + SGGDGGG+  KC+CSPT HPGSFRCR H  DY W  R
Subjt:  EVVRQQKSGGDGGGN--KCICSPTTHPGSFRCRFHQRDYRWVSR

A0A5A7TXE6 Uncharacterized protein1.4e-0654.9Show/hide
Query:  PAQEVVRQQKSGGD-GGGNKCICSPTTHPGSFRCRFHQRDYRWVSRSRFSK
        PA+E     +S GD  G  +C+CSPTTHPGSFRCR H+ +Y WV+R R  K
Subjt:  PAQEVVRQQKSGGD-GGGNKCICSPTTHPGSFRCRFHQRDYRWVSRSRFSK

D7LFC8 Uncharacterized protein (Fragment)1.1e-0649.12Show/hide
Query:  VAPAQEVVRQQKSGGDGGG--NKCICSPTTHPGSFRCRFHQRDYRWVSRSRFSKPHK
        VA   E     +SGGDGG    KC+CSP+ HP SF+CR+HQ +Y+W+  S  S  HK
Subjt:  VAPAQEVVRQQKSGGDGGG--NKCICSPTTHPGSFRCRFHQRDYRWVSRSRFSKPHK

Q1G3Y9 Uncharacterized protein1.8e-0650.94Show/hide
Query:  VAPAQEVVRQQKSGGDGGG--NKCICSPTTHPGSFRCRFHQRDYRWVSRSRFS
        VA   E     +SGGDGGG   KC+CSP+ HP SF+CR+HQ +Y+W+  S  S
Subjt:  VAPAQEVVRQQKSGGDGGG--NKCICSPTTHPGSFRCRFHQRDYRWVSRSRFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52342.1 unknown protein3.5e-1050.94Show/hide
Query:  VAPAQEVVRQQKSGGDGGG--NKCICSPTTHPGSFRCRFHQRDYRWVSRSRFS
        VA   E     +SGGDGGG   KC+CSP+ HP SF+CR+HQ +Y+W+  S  S
Subjt:  VAPAQEVVRQQKSGGDGGG--NKCICSPTTHPGSFRCRFHQRDYRWVSRSRFS

AT1G67910.1 unknown protein2.2e-0483.33Show/hide
Query:  CICSPTTHPGSFRCRFHQ
        C+CSPTTHPGSFRCR H+
Subjt:  CICSPTTHPGSFRCRFHQ

AT3G13227.1 serine-rich protein-related1.8e-0647.73Show/hide
Query:  RQQKSGGDGGGN-----------KCICSPTTHPGSFRCRFHQRD
        R ++ GG GGG+            C+C+PTTHPGSFRCR+H+R+
Subjt:  RQQKSGGDGGGN-----------KCICSPTTHPGSFRCRFHQRD

AT5G20370.1 serine-rich protein-related2.0e-0585Show/hide
Query:  KCICSPTTHPGSFRCRFHQR
        KC+CSPTTHPGSFRC FH+R
Subjt:  KCICSPTTHPGSFRCRFHQR

AT5G55980.1 serine-rich protein-related1.3e-0454.55Show/hide
Query:  RQQKSGGDGGGNKCICSPTTHPGSFRCRFHQRD
        R + S G      C+CSPTTH GSFRCR+H+ D
Subjt:  RQQKSGGDGGGNKCICSPTTHPGSFRCRFHQRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGAGAAGCTGAACAGAAGCTCTTCCATAAACTCCCAATCGATTTTCTCATGACGGATTCCGTGACTTCCTCAAAATCGCGATGCAATCGCTCGGAAGTTTCAGA
TTCTTGCCCTGATCTTCACAGAGCAAAGACGAAGAACTCGATCCTGCATTTTCCGACGATTCTGTGTGAGAATCGTCTGGAAGAGATCCTGATAAGTCGGGGGAGAAGAA
GAATCGGTGAGATCCGCCGTAGGAATCAACAGGCGATTCAGGTACAACGACCGGAAATTCTCGAAGAGGAACCGGTCGATATCGGCGAGCGTAGCGGCGGCATCTTCGTT
GTTACCGACGCCACAGAATCCAACTTTTTGAAGACGAAAAAAGCCACCGCCTTCGGCTTCGCCGGCCCCGGAAGGCCGCTTGTAGCGCCGGCACAGGAGGTCGTCCGGCA
GCAGAAAAGTGGCGGTGATGGTGGTGGAAACAAGTGTATTTGCTCGCCGACTACCCACCCAGGTTCTTTCAGATGTAGATTTCATCAAAGAGATTATAGATGGGTTAGTC
GGTCGAGATTTTCAAAACCCCACAAGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAGAGAAGCTGAACAGAAGCTCTTCCATAAACTCCCAATCGATTTTCTCATGACGGATTCCGTGACTTCCTCAAAATCGCGATGCAATCGCTCGGAAGTTTCAGA
TTCTTGCCCTGATCTTCACAGAGCAAAGACGAAGAACTCGATCCTGCATTTTCCGACGATTCTGTGTGAGAATCGTCTGGAAGAGATCCTGATAAGTCGGGGGAGAAGAA
GAATCGGTGAGATCCGCCGTAGGAATCAACAGGCGATTCAGGTACAACGACCGGAAATTCTCGAAGAGGAACCGGTCGATATCGGCGAGCGTAGCGGCGGCATCTTCGTT
GTTACCGACGCCACAGAATCCAACTTTTTGAAGACGAAAAAAGCCACCGCCTTCGGCTTCGCCGGCCCCGGAAGGCCGCTTGTAGCGCCGGCACAGGAGGTCGTCCGGCA
GCAGAAAAGTGGCGGTGATGGTGGTGGAAACAAGTGTATTTGCTCGCCGACTACCCACCCAGGTTCTTTCAGATGTAGATTTCATCAAAGAGATTATAGATGGGTTAGTC
GGTCGAGATTTTCAAAACCCCACAAGGTTTAACCTTTGAAATATGTGTATAAATTCATATATACACAAAATTTATATATAGGTGAAATATATGTACTGGCTCTCTCTCTT
TTTTTTTTTTTAAAAAAAAAAAAAAATTAAATAGGCTGCAACTTGATTTGATGTGTTGTGGTGTTTTGGTTCAGAATT
Protein sequenceShow/hide protein sequence
MNREAEQKLFHKLPIDFLMTDSVTSSKSRCNRSEVSDSCPDLHRAKTKNSILHFPTILCENRLEEILISRGRRRIGEIRRRNQQAIQVQRPEILEEEPVDIGERSGGIFV
VTDATESNFLKTKKATAFGFAGPGRPLVAPAQEVVRQQKSGGDGGGNKCICSPTTHPGSFRCRFHQRDYRWVSRSRFSKPHKV