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Clc09G02430 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G02430
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionthionin-like protein 2
Genome locationClcChr09:1954996..1958383
RNA-Seq ExpressionClc09G02430
SyntenyClc09G02430
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461039.1 PREDICTED: thionin-like protein 2 [Cucumis melo]5.0e-5084.87Show/hide
Query:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAGDVHRQ-QQNQFFCKLGCAASSCTKFSTSQNP
        ME+ +AKK  LMAWL+LTSLSTANSTSFQECYATCF+ICA+TPGVAFSDCPLRCLQACIVPSFPID+   VHRQ QQN FFCKLGCAASSCTKFST QNP
Subjt:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAGDVHRQ-QQNQFFCKLGCAASSCTKFSTSQNP

Query:  AEKKVGRCVDSCSQTCSMD
         E+KV RCVDSCSQTCSMD
Subjt:  AEKKVGRCVDSCSQTCSMD

XP_011659556.1 thionin-like protein 2 [Cucumis sativus]4.5e-5185.71Show/hide
Query:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAGDVHR-QQQNQFFCKLGCAASSCTKFSTSQNP
        ME+ +AKK  LMAWL+LTSLSTANSTSFQECYATCF+ICA+TPGVAFSDCPLRCLQACIVPSFPID+A  VHR QQQN FFCKLGCAASSCTKFST QNP
Subjt:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAGDVHR-QQQNQFFCKLGCAASSCTKFSTSQNP

Query:  AEKKVGRCVDSCSQTCSMD
         E+KVGRCVDSCSQTCSM+
Subjt:  AEKKVGRCVDSCSQTCSMD

XP_022953260.1 thionin-like protein 2 [Cucurbita moschata]6.5e-5084.3Show/hide
Query:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAG---DVHRQQQNQFFCKLGCAASSCTKFSTSQ
        MES  A K GLMAWLVL+SL+TANSTSFQECYATCF+ICA+TPGVAFSDCPLRCLQACI+PSFPI NA    DVHRQQ+NQFFC+LGCAASSCTKFST Q
Subjt:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAG---DVHRQQQNQFFCKLGCAASSCTKFSTSQ

Query:  NPAEKKVGRCVDSCSQTCSMD
        NPAEKKVG CVDSCS+TCSMD
Subjt:  NPAEKKVGRCVDSCSQTCSMD

XP_022992447.1 thionin-like protein 2 [Cucurbita maxima]1.4e-4984.17Show/hide
Query:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAG--DVHRQQQNQFFCKLGCAASSCTKFSTSQN
        MES  A K GLMAWLVL+SL+TANSTSFQECYATCF+ICA+TPGVAFSDCPLRCLQACI+PSFPI NA   DVHRQQ+NQFFC+LGCAASSCTKFST +N
Subjt:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAG--DVHRQQQNQFFCKLGCAASSCTKFSTSQN

Query:  PAEKKVGRCVDSCSQTCSMD
        PAEKKVG CVDSCS+TCSMD
Subjt:  PAEKKVGRCVDSCSQTCSMD

XP_038899383.1 thionin-like protein 2 [Benincasa hispida]5.9e-5186.84Show/hide
Query:  MAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAGDVHRQQQNQFFCKLGCAASSCTKFSTSQNPAEKKV
        MAKK  L+AWL+L+SLSTANSTSFQECYATCF+ICA+TPGVAFSDCPLRCLQACI+PSFPIDN  DVHRQ+QNQFFCKLGCA SSCTKFST QNPAEK+V
Subjt:  MAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAGDVHRQQQNQFFCKLGCAASSCTKFSTSQNPAEKKV

Query:  GRCVDSCSQTCSMD
        G CVDSCSQTCSMD
Subjt:  GRCVDSCSQTCSMD

TrEMBL top hitse value%identityAlignment
A0A0A0K781 Uncharacterized protein2.2e-5185.71Show/hide
Query:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAGDVHR-QQQNQFFCKLGCAASSCTKFSTSQNP
        ME+ +AKK  LMAWL+LTSLSTANSTSFQECYATCF+ICA+TPGVAFSDCPLRCLQACIVPSFPID+A  VHR QQQN FFCKLGCAASSCTKFST QNP
Subjt:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAGDVHR-QQQNQFFCKLGCAASSCTKFSTSQNP

Query:  AEKKVGRCVDSCSQTCSMD
         E+KVGRCVDSCSQTCSM+
Subjt:  AEKKVGRCVDSCSQTCSMD

A0A1S3CDU4 thionin-like protein 22.4e-5084.87Show/hide
Query:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAGDVHRQ-QQNQFFCKLGCAASSCTKFSTSQNP
        ME+ +AKK  LMAWL+LTSLSTANSTSFQECYATCF+ICA+TPGVAFSDCPLRCLQACIVPSFPID+   VHRQ QQN FFCKLGCAASSCTKFST QNP
Subjt:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAGDVHRQ-QQNQFFCKLGCAASSCTKFSTSQNP

Query:  AEKKVGRCVDSCSQTCSMD
         E+KV RCVDSCSQTCSMD
Subjt:  AEKKVGRCVDSCSQTCSMD

A0A6J1CW29 thionin-like protein 22.1e-3868.42Show/hide
Query:  LMAWLVLTS--LSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAG----DVHRQQQNQFFCKLGCAASSCTKFSTSQNPAEKKV
        +M WLV+ S  ++TA STSFQECYATCF+ICA+TPG +FS+CPL+CLQACI+PSFPID+A        R+  N FFCKLGCAA+ CT F+T+ NPAEKKV
Subjt:  LMAWLVLTS--LSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAG----DVHRQQQNQFFCKLGCAASSCTKFSTSQNPAEKKV

Query:  GRCVDSCSQTCSMD
        GRCVDSCS+TCSMD
Subjt:  GRCVDSCSQTCSMD

A0A6J1GMH5 thionin-like protein 23.1e-5084.3Show/hide
Query:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAG---DVHRQQQNQFFCKLGCAASSCTKFSTSQ
        MES  A K GLMAWLVL+SL+TANSTSFQECYATCF+ICA+TPGVAFSDCPLRCLQACI+PSFPI NA    DVHRQQ+NQFFC+LGCAASSCTKFST Q
Subjt:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAG---DVHRQQQNQFFCKLGCAASSCTKFSTSQ

Query:  NPAEKKVGRCVDSCSQTCSMD
        NPAEKKVG CVDSCS+TCSMD
Subjt:  NPAEKKVGRCVDSCSQTCSMD

A0A6J1JZ84 thionin-like protein 27.0e-5084.17Show/hide
Query:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAG--DVHRQQQNQFFCKLGCAASSCTKFSTSQN
        MES  A K GLMAWLVL+SL+TANSTSFQECYATCF+ICA+TPGVAFSDCPLRCLQACI+PSFPI NA   DVHRQQ+NQFFC+LGCAASSCTKFST +N
Subjt:  MESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQACIVPSFPIDNAG--DVHRQQQNQFFCKLGCAASSCTKFSTSQN

Query:  PAEKKVGRCVDSCSQTCSMD
        PAEKKVG CVDSCS+TCSMD
Subjt:  PAEKKVGRCVDSCSQTCSMD

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 26.2e-1135.29Show/hide
Query:  LTSLSTANSTSFQECYATCFIIC-ALTPGVAFSDCPLRCLQACI-VPSFPIDNAGDVHRQQQNQFFCKLGCAASSCTKFSTSQNPAEKKVGRCVDSCSQT
        L + + A    F+ECY  C + C A +    +  CP  C + C+  PS P  ++ ++    ++ +FCKLGCA   C   S+ QNP  ++V  CVDSCS  
Subjt:  LTSLSTANSTSFQECYATCFIIC-ALTPGVAFSDCPLRCLQACI-VPSFPIDNAGDVHRQQQNQFFCKLGCAASSCTKFSTSQNPAEKKVGRCVDSCSQT

Query:  CS
        C+
Subjt:  CS

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.4.4e-1235.29Show/hide
Query:  LTSLSTANSTSFQECYATCFIIC-ALTPGVAFSDCPLRCLQACI-VPSFPIDNAGDVHRQQQNQFFCKLGCAASSCTKFSTSQNPAEKKVGRCVDSCSQT
        L + + A    F+ECY  C + C A +    +  CP  C + C+  PS P  ++ ++    ++ +FCKLGCA   C   S+ QNP  ++V  CVDSCS  
Subjt:  LTSLSTANSTSFQECYATCFIIC-ALTPGVAFSDCPLRCLQACI-VPSFPIDNAGDVHRQQQNQFFCKLGCAASSCTKFSTSQNPAEKKVGRCVDSCSQT

Query:  CS
        C+
Subjt:  CS

AT1G12672.1 unknown protein2.8e-0652.5Show/hide
Query:  NQFFCKLGCAASSCTKFSTSQNPAEKKVGRCVDSCSQTCS
        N ++CKLGC+   C   S+ QNP   KV  CVDSCS  CS
Subjt:  NQFFCKLGCAASSCTKFSTSQNPAEKKVGRCVDSCSQTCS

AT1G12672.2 unknown protein1.7e-0840.62Show/hide
Query:  CLQACI-VPSFPIDNAGDVHRQQQNQFFCKLGCAASSCTKFSTSQNPAEKKVGRCVDSCSQTCS
        C++ C+  PS  +D+  +++    N ++CKLGC+   C   S+ QNP   KV  CVDSCS  CS
Subjt:  CLQACI-VPSFPIDNAGDVHRQQQNQFFCKLGCAASSCTKFSTSQNPAEKKVGRCVDSCSQTCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGACAACATTAACATAATCAATTCTTCTGTGAGCTTGGCTGTGCAGCTTCCTCATGTGCCAAGTTTAGCACAAAGCAAAGTCCATGTTCAAAATATACACCCTGT
TTCAAAGGAAGGGAGAAAACAAGAGACTTCATTTTCATCATCATCATCAATGGAGAGCAGCATGGCAAAAAAAAGGGGTTTAATGGCTTGGCTAGTGCTGACCTCGCTCT
CCACGGCCAATTCCACCTCTTTTCAAGAATGCTACGCCACCTGCTTCATCATATGCGCCCTCACGCCCGGCGTCGCCTTCTCCGACTGCCCGTTGAGATGCCTGCAAGCT
TGCATCGTCCCGTCTTTTCCTATCGACAACGCCGGCGACGTCCATCGACAGCAACAAAATCAATTCTTCTGCAAGCTCGGCTGCGCGGCTTCCTCATGTACTAAGTTTAG
CACAAGCCAAAACCCAGCTGAAAAAAAAGTGGGGAGATGTGTGGATTCTTGCTCTCAAACATGTTCCATGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGACAACATTAACATAATCAATTCTTCTGTGAGCTTGGCTGTGCAGCTTCCTCATGTGCCAAGTTTAGCACAAAGCAAAGTCCATGTTCAAAATATACACCCTGT
TTCAAAGGAAGGGAGAAAACAAGAGACTTCATTTTCATCATCATCATCAATGGAGAGCAGCATGGCAAAAAAAAGGGGTTTAATGGCTTGGCTAGTGCTGACCTCGCTCT
CCACGGCCAATTCCACCTCTTTTCAAGAATGCTACGCCACCTGCTTCATCATATGCGCCCTCACGCCCGGCGTCGCCTTCTCCGACTGCCCGTTGAGATGCCTGCAAGCT
TGCATCGTCCCGTCTTTTCCTATCGACAACGCCGGCGACGTCCATCGACAGCAACAAAATCAATTCTTCTGCAAGCTCGGCTGCGCGGCTTCCTCATGTACTAAGTTTAG
CACAAGCCAAAACCCAGCTGAAAAAAAAGTGGGGAGATGTGTGGATTCTTGCTCTCAAACATGTTCCATGGATTGATCTGCATCTGCTAAATGAAGCCAATGAACTACTT
TTCTTCTTTTTTGAAAAGAATATATTGTGTTTTATTTGAAATGAAACTACATTATTGTTGGAATTTCTTTCTATACTAAAGAAGGATTTTGGGTTTAGGTGTTAAAATGG
CAAATTAGGC
Protein sequenceShow/hide protein sequence
MLDNINIINSSVSLAVQLPHVPSLAQSKVHVQNIHPVSKEGRKQETSFSSSSSMESSMAKKRGLMAWLVLTSLSTANSTSFQECYATCFIICALTPGVAFSDCPLRCLQA
CIVPSFPIDNAGDVHRQQQNQFFCKLGCAASSCTKFSTSQNPAEKKVGRCVDSCSQTCSMD