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Clc09G02450 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G02450
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionthionin-like protein 2
Genome locationClcChr09:1961419..1964853
RNA-Seq ExpressionClc09G02450
SyntenyClc09G02450
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461039.1 PREDICTED: thionin-like protein 2 [Cucumis melo]8.6e-2258.33Show/hide
Query:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS--TKNAKFHHQHQHQNQLFCNLGCATSSCTNFSTKDNP
        +A KW LM WLLL+SLS ANS +F +CY +CFV+C ITPGV+F DCP RCL +C+ PS    +    H+ + QN  FC LGCA SSCT FSTK NP
Subjt:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS--TKNAKFHHQHQHQNQLFCNLGCATSSCTNFSTKDNP

XP_011659556.1 thionin-like protein 2 [Cucumis sativus]6.0e-2360.42Show/hide
Query:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS--TKNAKFHHQHQHQNQLFCNLGCATSSCTNFSTKDNP
        +A KW LM WLLL+SLS ANS +F +CY +CFV+C ITPGV+F DCP RCL +C+ PS    +A   H+ Q QN  FC LGCA SSCT FSTK NP
Subjt:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS--TKNAKFHHQHQHQNQLFCNLGCATSSCTNFSTKDNP

XP_023547567.1 thionin-like protein 2 [Cucurbita pepo subsp. pepo]1.2e-2059.6Show/hide
Query:  SMAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS--TKNAKFHHQH-QHQNQLFCNLGCATSSCTNFSTKDNPA
        S   K GLM WL+LSSL+ ANS +F +CY +CFV+C ITPGV+F DCP RCL +C+ PS    NA     H Q +NQ FC LGCATSSCT FST  NPA
Subjt:  SMAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS--TKNAKFHHQH-QHQNQLFCNLGCATSSCTNFSTKDNPA

XP_038896425.1 thionin-like protein 2 [Benincasa hispida]2.3e-2256.31Show/hide
Query:  SSMAMKWGLMGWLLLSSLSMANSN------FLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMS-PSTKNAKFHHQHQHQNQLFCNLGCATSSCTNFSTKD
        SSMAMKW LM  LLLSSLS+ANS       F +CY SCF +C + P +   DCP RCLHSC++ PS  NA+FH   Q  +Q +C LGCATS+CT F TK+
Subjt:  SSMAMKWGLMGWLLLSSLSMANSN------FLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMS-PSTKNAKFHHQHQHQNQLFCNLGCATSSCTNFSTKD

Query:  NPA
         PA
Subjt:  NPA

XP_038899383.1 thionin-like protein 2 [Benincasa hispida]3.5e-2362.11Show/hide
Query:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPSTKNAKFHHQHQHQNQLFCNLGCATSSCTNFSTKDNPA
        MA KW L+ WLLLSSLS ANS +F +CY +CFV+C ITPGV+F DCP RCL +C+ PS          Q QNQ FC LGCA SSCT FSTK NPA
Subjt:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPSTKNAKFHHQHQHQNQLFCNLGCATSSCTNFSTKDNPA

TrEMBL top hitse value%identityAlignment
A0A0A0K781 Uncharacterized protein2.9e-2360.42Show/hide
Query:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS--TKNAKFHHQHQHQNQLFCNLGCATSSCTNFSTKDNP
        +A KW LM WLLL+SLS ANS +F +CY +CFV+C ITPGV+F DCP RCL +C+ PS    +A   H+ Q QN  FC LGCA SSCT FSTK NP
Subjt:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS--TKNAKFHHQHQHQNQLFCNLGCATSSCTNFSTKDNP

A0A1S3CDU4 thionin-like protein 24.2e-2258.33Show/hide
Query:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS--TKNAKFHHQHQHQNQLFCNLGCATSSCTNFSTKDNP
        +A KW LM WLLL+SLS ANS +F +CY +CFV+C ITPGV+F DCP RCL +C+ PS    +    H+ + QN  FC LGCA SSCT FSTK NP
Subjt:  MAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS--TKNAKFHHQHQHQNQLFCNLGCATSSCTNFSTKDNP

A0A6J1CW29 thionin-like protein 29.3e-1444.76Show/hide
Query:  KWGL---MGWLLLSSLSMA---NSNFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS--------TKNAKFHHQHQHQNQLFCNLGCATSSCTNFST
        KWGL   M WL++ S  M    +++F +CY +CFV+C ITPG SF +CP +CL +C+ PS        T  A     H H    FC LGCA + CTNF+T
Subjt:  KWGL---MGWLLLSSLSMA---NSNFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS--------TKNAKFHHQHQHQNQLFCNLGCATSSCTNFST

Query:  KDNPA
          NPA
Subjt:  KDNPA

A0A6J1GMH5 thionin-like protein 21.1e-1956Show/hide
Query:  SMAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS----TKNAKFHHQHQHQNQLFCNLGCATSSCTNFSTKDNPA
        S   K GLM WL+LSSL+ ANS +F +CY +CFV+C ITPGV+F DCP RCL +C+ PS       A      Q +NQ FC LGCA SSCT FST  NPA
Subjt:  SMAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS----TKNAKFHHQHQHQNQLFCNLGCATSSCTNFSTKDNPA

A0A6J1JZ84 thionin-like protein 23.9e-2057.58Show/hide
Query:  SMAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS--TKNAKFHHQH-QHQNQLFCNLGCATSSCTNFSTKDNPA
        S   K GLM WL+LSSL+ ANS +F +CY +CF++C ITPGV+F DCP RCL +C+ PS    NA     H Q +NQ FC LGCA SSCT FST+ NPA
Subjt:  SMAMKWGLMGWLLLSSLSMANS-NFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPS--TKNAKFHHQH-QHQNQLFCNLGCATSSCTNFSTKDNPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCAGCAGCATGGCAATGAAATGGGGTTTAATGGGTTGGCTGTTGCTGTCCTCGCTCTCCATGGCCAATTCCAATTTTCTAGATTGCTACCACTCCTGCTTCGT
CATGTGCGTCATCACCCCCGGCGTCTCCTTCCTCGACTGCCCCTCCAGATGCTTGCATTCATGCATGTCCCCATCTACCAAAAACGCCAAGTTCCATCACCAACATCAAC
ATCAGAATCAACTCTTCTGCAACCTCGGTTGCGCAACTTCCTCCTGTACCAACTTTAGCACAAAGGACAATCCAGCTGGGTCTCCATGGCCAATTCCGAATCTATTCAAG
ACTGCTACAGCACCTGCTTCGTGGTATGCGCAGTCACGCCCGGCATCTCCTTCTCCGACTGCCCCTCGAGATGCCTGCGTTCTTGCATCACCCCCTCTAATTCTTCCATG
GGCAACACCGATGTCCATTCTCAACAAAAAAATCATTTCTACTGCGAGCTCGGCTGTGCAACTTCCTGGTGTACTAAGTACAGCACAAAGGATAATCCAGCTGCCAAAGA
AGTGGGGAGCTGTGTGGATTCTTGCTCTCAAACATGTTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCAGCAGCATGGCAATGAAATGGGGTTTAATGGGTTGGCTGTTGCTGTCCTCGCTCTCCATGGCCAATTCCAATTTTCTAGATTGCTACCACTCCTGCTTCGT
CATGTGCGTCATCACCCCCGGCGTCTCCTTCCTCGACTGCCCCTCCAGATGCTTGCATTCATGCATGTCCCCATCTACCAAAAACGCCAAGTTCCATCACCAACATCAAC
ATCAGAATCAACTCTTCTGCAACCTCGGTTGCGCAACTTCCTCCTGTACCAACTTTAGCACAAAGGACAATCCAGCTGGGTCTCCATGGCCAATTCCGAATCTATTCAAG
ACTGCTACAGCACCTGCTTCGTGGTATGCGCAGTCACGCCCGGCATCTCCTTCTCCGACTGCCCCTCGAGATGCCTGCGTTCTTGCATCACCCCCTCTAATTCTTCCATG
GGCAACACCGATGTCCATTCTCAACAAAAAAATCATTTCTACTGCGAGCTCGGCTGTGCAACTTCCTGGTGTACTAAGTACAGCACAAAGGATAATCCAGCTGCCAAAGA
AGTGGGGAGCTGTGTGGATTCTTGCTCTCAAACATGTTCCATGA
Protein sequenceShow/hide protein sequence
MESSSMAMKWGLMGWLLLSSLSMANSNFLDCYHSCFVMCVITPGVSFLDCPSRCLHSCMSPSTKNAKFHHQHQHQNQLFCNLGCATSSCTNFSTKDNPAGSPWPIPNLFK
TATAPASWYAQSRPASPSPTAPRDACVLASPPLILPWATPMSILNKKIISTASSAVQLPGVLSTAQRIIQLPKKWGAVWILALKHVP