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Clc09G03245 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G03245
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLRRNT_2 domain-containing protein
Genome locationClcChr09:2531131..2531755
RNA-Seq ExpressionClc09G03245
SyntenyClc09G03245
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461139.1 PREDICTED: receptor-like protein 12 isoform X1 [Cucumis melo]2.0e-3459.21Show/hide
Query:  KFMVSNGCVEEERLSLPCFCPIISLQSPTIHFLHGLELIVAIGI------EFQCDTFGNHVVDLFFYNLLNDEYYR-FHPSYNLLNLSLFQNFKELKTLD
        +  VSNGC+EEERLSL      I L     H  H       +G         +CDTFG HVV+L  Y L +DE+Y     +Y+LLNLSLFQNFKELKTLD
Subjt:  KFMVSNGCVEEERLSLPCFCPIISLQSPTIHFLHGLELIVAIGI------EFQCDTFGNHVVDLFFYNLLNDEYYR-FHPSYNLLNLSLFQNFKELKTLD

Query:  LTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI
        LTYN F + T NQGFNKF +FNKLETLNLSGNYF NKI SSLSG TSLKKL+
Subjt:  LTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI

XP_008461140.1 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X2 [Cucumis melo]2.0e-3459.21Show/hide
Query:  KFMVSNGCVEEERLSLPCFCPIISLQSPTIHFLHGLELIVAIGI------EFQCDTFGNHVVDLFFYNLLNDEYYR-FHPSYNLLNLSLFQNFKELKTLD
        +  VSNGC+EEERLSL      I L     H  H       +G         +CDTFG HVV+L  Y L +DE+Y     +Y+LLNLSLFQNFKELKTLD
Subjt:  KFMVSNGCVEEERLSLPCFCPIISLQSPTIHFLHGLELIVAIGI------EFQCDTFGNHVVDLFFYNLLNDEYYR-FHPSYNLLNLSLFQNFKELKTLD

Query:  LTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI
        LTYN F + T NQGFNKF +FNKLETLNLSGNYF NKI SSLSG TSLKKL+
Subjt:  LTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI

XP_011659519.1 receptor-like protein 56 isoform X1 [Cucumis sativus]2.2e-3358.55Show/hide
Query:  KFMVSNGCVEEERLSLPCFCPIISLQSPTIHFLHGLELIVAIGI------EFQCDTFGNHVVDLFFYNLLNDEYYR-FHPSYNLLNLSLFQNFKELKTLD
        +  VSNGC+EEERLSL      I L     H  H       +G         +CDT G HVV+L  Y L +DE+YR    +Y+LLNLSLFQNFKELKTLD
Subjt:  KFMVSNGCVEEERLSLPCFCPIISLQSPTIHFLHGLELIVAIGI------EFQCDTFGNHVVDLFFYNLLNDEYYR-FHPSYNLLNLSLFQNFKELKTLD

Query:  LTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI
        LTYN F + T NQGFNKF +FNKLE LNLSGNYF NKI SSLSG TSLKKL+
Subjt:  LTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI

XP_038896173.1 receptor-like protein 13 [Benincasa hispida]1.3e-3362.59Show/hide
Query:  VSNGCVEEERLSL----PCFCPIISLQ-SPTIHFLHGLELIVAIGIEFQCDTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNG
        VSNGCVEEER+ L      F    S Q S    F   +          QCDTFG HVVDLF   LL D YY  +  Y LLN+SLFQNFK+LKTLDLTYNG
Subjt:  VSNGCVEEERLSL----PCFCPIISLQ-SPTIHFLHGLELIVAIGIEFQCDTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNG

Query:  FTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI
        F DFT+ QGFNKFSSFNKLETLNLS N+F NK+ SSLSGLTSLKKL+
Subjt:  FTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI

XP_038896246.1 LOW QUALITY PROTEIN: receptor-like protein 13 [Benincasa hispida]7.4e-3457.76Show/hide
Query:  SKFMVSNGCVEEERLSLPCFCPIISLQSPTIHFLHGLELIVA----------IGI------EFQCDTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLF
        S   V NGCVEEERLSL        LQ  ++ F + L               IG         +CD FG+HVVDL    LL+DEY+ F  SY LLNLSLF
Subjt:  SKFMVSNGCVEEERLSLPCFCPIISLQSPTIHFLHGLELIVA----------IGI------EFQCDTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLF

Query:  QNFKELKTLDLTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL
        QNFKELK LDLTYN F DFT+++GFNKFSSFNKL+ L LSGNYF +KIFSSLSGLTSLKKL
Subjt:  QNFKELKTLDLTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL

TrEMBL top hitse value%identityAlignment
A0A0A0K6A3 LRRNT_2 domain-containing protein9.5e-1959.78Show/hide
Query:  HVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI
        +V++LF ++LL+ +    +P+ +LLN SLFQ+ K+LKTLDL+YN F+ FT NQGFN FSSF+KLETLNL+GNYFEN+I  SL GL S+ KL+
Subjt:  HVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI

A0A0A0K6W0 LRRNT_2 domain-containing protein1.4e-3355.95Show/hide
Query:  MESKFMVSNGCVEEERLSLPCFCPIISLQSPTIHFLHGLELIVAIGI------EFQCDTFGNHVVDLFFYNLLNDEYYR-FHPSYNLLNLSLFQNFKELK
        MESK MVSNGC+EEERLSL      I L     H  H       +G         +CDT G HVV+L  Y L +DE+YR    +Y+LLNLSLFQNFKELK
Subjt:  MESKFMVSNGCVEEERLSLPCFCPIISLQSPTIHFLHGLELIVAIGI------EFQCDTFGNHVVDLFFYNLLNDEYYR-FHPSYNLLNLSLFQNFKELK

Query:  TLDLTYNGFTDFTENQ-------------GFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI
        TLDLTYN F + T NQ             GFNKF +FNKLE LNLSGNYF NKI SSLSG TSLKKL+
Subjt:  TLDLTYNGFTDFTENQ-------------GFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI

A0A0A0K8Q0 LRRNT_2 domain-containing protein5.6e-2754.43Show/hide
Query:  SKFMVSNGCVEEERLS-LPCFCPIISLQSPTI-HFLHGLELIVAIGIE---------FQCDTFGNHVVDLFFYNLLNDEY-YRFHPS-YNLLNLSLFQNF
        S   V NGCVEEERLS L      +S ++ +I H+    +    +  +          QCDT G +V+ L   +LL   Y +R   + Y LLNLSLFQNF
Subjt:  SKFMVSNGCVEEERLS-LPCFCPIISLQSPTI-HFLHGLELIVAIGIE---------FQCDTFGNHVVDLFFYNLLNDEY-YRFHPS-YNLLNLSLFQNF

Query:  KELKTLDLTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL
        KELKTLDL YNGFTDFTENQGFN FSSFNKLETLNLS  +F NKI SSL+GL SLK L
Subjt:  KELKTLDLTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL

A0A1S3CE25 receptor-like protein 12 isoform X19.5e-3559.21Show/hide
Query:  KFMVSNGCVEEERLSLPCFCPIISLQSPTIHFLHGLELIVAIGI------EFQCDTFGNHVVDLFFYNLLNDEYYR-FHPSYNLLNLSLFQNFKELKTLD
        +  VSNGC+EEERLSL      I L     H  H       +G         +CDTFG HVV+L  Y L +DE+Y     +Y+LLNLSLFQNFKELKTLD
Subjt:  KFMVSNGCVEEERLSLPCFCPIISLQSPTIHFLHGLELIVAIGI------EFQCDTFGNHVVDLFFYNLLNDEYYR-FHPSYNLLNLSLFQNFKELKTLD

Query:  LTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI
        LTYN F + T NQGFNKF +FNKLETLNLSGNYF NKI SSLSG TSLKKL+
Subjt:  LTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI

A0A1S3CEG5 probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X29.5e-3559.21Show/hide
Query:  KFMVSNGCVEEERLSLPCFCPIISLQSPTIHFLHGLELIVAIGI------EFQCDTFGNHVVDLFFYNLLNDEYYR-FHPSYNLLNLSLFQNFKELKTLD
        +  VSNGC+EEERLSL      I L     H  H       +G         +CDTFG HVV+L  Y L +DE+Y     +Y+LLNLSLFQNFKELKTLD
Subjt:  KFMVSNGCVEEERLSLPCFCPIISLQSPTIHFLHGLELIVAIGI------EFQCDTFGNHVVDLFFYNLLNDEYYR-FHPSYNLLNLSLFQNFKELKTLD

Query:  LTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI
        LTYN F + T NQGFNKF +FNKLETLNLSGNYF NKI SSLSG TSLKKL+
Subjt:  LTYNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI

SwissProt top hitse value%identityAlignment
F4HTV4 Receptor-like protein 144.9e-0442.47Show/hide
Query:  NLLNLSLFQNFKELKTLDLT---YNGFTD-FTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL
        +LLNLSL   F+EL++L+L+   YN F   F + +G+        LE L+LS N F N IF  L+  TSL  L
Subjt:  NLLNLSLFQNFKELKTLDLT---YNGFTD-FTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL

F4I9S3 Receptor-like protein 9a2.9e-0433Show/hide
Query:  QCDTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNGFTD-FTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI
        +CD     V+ LF     +D          L+NLSLF  F+EL+TL+L   G T  F +  G+       KLE L++  N   N +   L+  +SL+ LI
Subjt:  QCDTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNGFTD-FTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI

F4K4T3 Receptor-like protein 566.4e-0438.75Show/hide
Query:  YYRFHPSYNLLNLSLFQNFKELKTLDLT---YNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL
        Y  ++   +LLNLSL   F+E+++LDL+    NG  D  E  G+        L+ LN S N F N IF  L+  TSL  L
Subjt:  YYRFHPSYNLLNLSLFQNFKELKTLDLT---YNGFTDFTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL

Q9LNV9 Receptor-like protein 16.8e-0635.05Show/hide
Query:  DTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNGFTDFTEN-QGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL
        D    HV+ L    L+      F      LNLSL  +F +L++L+L++N FT+ +++  GF  F + +KL TL+ S N F+N I   L+  TS++ L
Subjt:  DTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNGFTDFTEN-QGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL

Arabidopsis top hitse value%identityAlignment
AT1G07390.1 receptor like protein 14.8e-0735.05Show/hide
Query:  DTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNGFTDFTEN-QGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL
        D    HV+ L    L+      F      LNLSL  +F +L++L+L++N FT+ +++  GF  F + +KL TL+ S N F+N I   L+  TS++ L
Subjt:  DTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNGFTDFTEN-QGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL

AT1G07390.3 receptor like protein 14.8e-0735.05Show/hide
Query:  DTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNGFTDFTEN-QGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL
        D    HV+ L    L+      F      LNLSL  +F +L++L+L++N FT+ +++  GF  F + +KL TL+ S N F+N I   L+  TS++ L
Subjt:  DTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNGFTDFTEN-QGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL

AT1G58190.1 receptor like protein 92.0e-0533Show/hide
Query:  QCDTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNGFTD-FTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI
        +CD     V+ LF     +D          L+NLSLF  F+EL+TL+L   G T  F +  G+       KLE L++  N   N +   L+  +SL+ LI
Subjt:  QCDTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNGFTD-FTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI

AT1G58190.2 receptor like protein 92.0e-0533Show/hide
Query:  QCDTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNGFTD-FTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI
        +CD     V+ LF     +D          L+NLSLF  F+EL+TL+L   G T  F +  G+       KLE L++  N   N +   L+  +SL+ LI
Subjt:  QCDTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNGFTD-FTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLI

AT1G74180.1 receptor like protein 143.5e-0542.47Show/hide
Query:  NLLNLSLFQNFKELKTLDLT---YNGFTD-FTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL
        +LLNLSL   F+EL++L+L+   YN F   F + +G+        LE L+LS N F N IF  L+  TSL  L
Subjt:  NLLNLSLFQNFKELKTLDLT---YNGFTD-FTENQGFNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCGAAGTTTATGGTATCGAATGGGTGTGTTGAGGAAGAAAGATTGAGCTTACCATGTTTTTGTCCTATAATATCACTCCAATCTCCAACAATCCATTTCCTTCA
TGGATTGGAGCTAATTGTTGCAATTGGGATAGAGTTTCAATGTGACACTTTTGGCAACCATGTGGTGGATCTCTTCTTCTACAACTTGTTGAATGATGAATATTATAGAT
TCCACCCCAGTTATAATTTGTTAAATCTTTCTCTATTTCAAAATTTTAAAGAATTGAAAACTCTTGACTTAACGTATAATGGATTCACTGATTTTACTGAAAACCAAGGA
TTCAACAAATTTTCAAGTTTCAACAAATTGGAGACTTTAAATCTTTCTGGAAATTATTTTGAAAATAAAATCTTTTCATCTTTAAGTGGACTTACATCGTTAAAGAAGTT
GATTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCGAAGTTTATGGTATCGAATGGGTGTGTTGAGGAAGAAAGATTGAGCTTACCATGTTTTTGTCCTATAATATCACTCCAATCTCCAACAATCCATTTCCTTCA
TGGATTGGAGCTAATTGTTGCAATTGGGATAGAGTTTCAATGTGACACTTTTGGCAACCATGTGGTGGATCTCTTCTTCTACAACTTGTTGAATGATGAATATTATAGAT
TCCACCCCAGTTATAATTTGTTAAATCTTTCTCTATTTCAAAATTTTAAAGAATTGAAAACTCTTGACTTAACGTATAATGGATTCACTGATTTTACTGAAAACCAAGGA
TTCAACAAATTTTCAAGTTTCAACAAATTGGAGACTTTAAATCTTTCTGGAAATTATTTTGAAAATAAAATCTTTTCATCTTTAAGTGGACTTACATCGTTAAAGAAGTT
GATTGCTTAA
Protein sequenceShow/hide protein sequence
MESKFMVSNGCVEEERLSLPCFCPIISLQSPTIHFLHGLELIVAIGIEFQCDTFGNHVVDLFFYNLLNDEYYRFHPSYNLLNLSLFQNFKELKTLDLTYNGFTDFTENQG
FNKFSSFNKLETLNLSGNYFENKIFSSLSGLTSLKKLIA