CuGenDBv2

Gene ID	Clc09G03560
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Genome location	ClcChr09:2716476..2722069
RNA-Seq Expression	Clc09G03560
Synteny	Clc09G03560
Gene Ontology terms	NA
InterPro domains	IPR018962 - Domain of unknown function DUF1995 IPR044687 - Protein LOW PSII ACCUMULATION 3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0058708.1 protein LOW PSII ACCUMULATION 3 [Cucumis melo var. makuwa]

4.7e-213

96.16

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        M IMAFLSSPP+IPSLSRPFH NFLFSPIS   S+LRRST SSLFGAQTLA SGFCFRIHCRDKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS
        YALEDG++RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTA+DSIDGITVSSLDDVPAGPVTSFFRS
Subjt:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS

Query:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        VRNTLDFDFED+NAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
Subjt:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

KAG6575630.1 Protein LOW PSII ACCUMULATION 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-212

95.14

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSL RP H NFLFSPIS SFSALRRSTRSSLFGAQTLATSGFCFRIHC DKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS
        YALEDG++RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RAS+LFKTALDSIDGIT+SSLDDVPAGPVTSFFRS
Subjt:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS

Query:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +RNTLDFDFEDENAGRWTSS+PPSLYIFINCSTREL +IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        IAPYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

XP_022954402.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita moschata]

6.1e-213

95.14

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSL RPFH NFLFSPI+ SFSALRRSTRSSLFGAQTLATSGFCFRIHC DKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS
        YALEDG++RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RAS+LFKTALDSIDGIT+SSLDDVPAGPVTSFFRS
Subjt:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS

Query:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +RNTLDFDFEDENAGRWTSS+PPSLYIFINCSTREL +IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        IAPYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

XP_022992481.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita maxima]

3.6e-213

95.14

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSL RPFH NFLFSPIS SFSALRRSTRSSLFGAQTLATSGFCFRIHC DKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS
        YALEDG++RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RAS+LFKTALDSIDGIT+SSLDD+PAGPVTSFFRS
Subjt:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS

Query:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +RNTLDFDFEDENAGRWTSS+PPSLYIFINCSTREL +IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        IAPYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

XP_038900014.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Benincasa hispida]

2.9e-215

96.68

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAF+SSPP IPSLSR FH NFLFSPIS SF ALRRSTRSSLFGAQTLATSGFCFRIHCRDKER +PVT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS
        YALEDG+IRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRAS+LFKTALDSIDGITVSSLDDVPAGPVTSFFRS
Subjt:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS

Query:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        VRNTLDFDFEDEN+GRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
Subjt:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KA03 DUF1995 domain-containing protein

1.2e-209

94.88

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSLS PFH NFLFSPIS   S+LRRSTRSSLFGAQTLA SGFCFRIHC DKERAAPVT+ SDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS
        YALEDG++RLEIDFPPLPSNISSYKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKPEKRRAS+LFKTALDSIDGITVSSLDDVPAG VTSFFRS
Subjt:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS

Query:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        VRNTLDFDFED+NAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIP LLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
Subjt:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        +APYIVNYSGALFRQY GPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A1S3CFB8 protein LOW PSII ACCUMULATION 3, chloroplastic

3.3e-212

95.65

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        M IMAF+SSPP+IPSLSRPF  NFLFSPIS   S+LRRST SSLFGAQTLA SGFCFRIHCRDKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS
        YALEDG++RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTA+DSIDGITVSSLDDVPAGPVTSFFRS
Subjt:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS

Query:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        VRNTLDFDFED+NAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
Subjt:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A5A7UU42 Protein LOW PSII ACCUMULATION 3

2.3e-213

96.16

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        M IMAFLSSPP+IPSLSRPFH NFLFSPIS   S+LRRST SSLFGAQTLA SGFCFRIHCRDKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS
        YALEDG++RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTA+DSIDGITVSSLDDVPAGPVTSFFRS
Subjt:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS

Query:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        VRNTLDFDFED+NAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
Subjt:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A6J1GQW6 protein LOW PSII ACCUMULATION 3, chloroplastic

3.0e-213

95.14

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSL RPFH NFLFSPI+ SFSALRRSTRSSLFGAQTLATSGFCFRIHC DKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS
        YALEDG++RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RAS+LFKTALDSIDGIT+SSLDDVPAGPVTSFFRS
Subjt:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS

Query:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +RNTLDFDFEDENAGRWTSS+PPSLYIFINCSTREL +IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        IAPYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

A0A6J1JTN7 protein LOW PSII ACCUMULATION 3, chloroplastic

1.7e-213

95.14

Show/hide

Query:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSL RPFH NFLFSPIS SFSALRRSTRSSLFGAQTLATSGFCFRIHC DKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS
        YALEDG++RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RAS+LFKTALDSIDGIT+SSLDD+PAGPVTSFFRS
Subjt:  YALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRS

Query:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +RNTLDFDFEDENAGRWTSS+PPSLYIFINCSTREL +IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        IAPYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

SwissProt top hits

e value

%identity

Alignment

Q8H0W0 Protein LPA3

2.0e-150

73.09

Show/hide

Query:  SLFGAQTLATSGFCFRIHCRDKERA----APVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQL
        +LF + ++ TS    RI C     +    +  + +SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D + RLEIDFPPLPS+ISSYKGSSD+FIDANIQL
Subjt:  SLFGAQTLATSGFCFRIHCRDKERA----APVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQL

Query:  ALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGL
        A+ V R LQEK  TR+CIVFPDKPEKRRAS+ FK A DS+DGI++ SLDD+P   VT+FFRS+R+TLDFDFEDEN G W   +PP+LYIFINCSTREL  
Subjt:  ALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGL

Query:  IEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESE
        IEK+VETFASS P LLFNLEL+TLRADLGLLGFPPKDLHYRFLSQFIPVFYIR REYSKTVA+AP+++NY+GALFRQYPGPWQVMLKQ+D S+ACVAES 
Subjt:  IEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESE

Query:  TRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRGYK+ATWWEEDV+ E SS WR+
Subjt:  TRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

Arabidopsis top hits

e value

%identity

Alignment

AT1G73060.1 Low PSII Accumulation 3

1.4e-151

73.09

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Query:  SLFGAQTLATSGFCFRIHCRDKERA----APVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQL
        +LF + ++ TS    RI C     +    +  + +SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D + RLEIDFPPLPS+ISSYKGSSD+FIDANIQL
Subjt:  SLFGAQTLATSGFCFRIHCRDKERA----APVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGEIRLEIDFPPLPSNISSYKGSSDEFIDANIQL

Query:  ALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGL
        A+ V R LQEK  TR+CIVFPDKPEKRRAS+ FK A DS+DGI++ SLDD+P   VT+FFRS+R+TLDFDFEDEN G W   +PP+LYIFINCSTREL  
Subjt:  ALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSSDPPSLYIFINCSTRELGL

Query:  IEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESE
        IEK+VETFASS P LLFNLEL+TLRADLGLLGFPPKDLHYRFLSQFIPVFYIR REYSKTVA+AP+++NY+GALFRQYPGPWQVMLKQ+D S+ACVAES 
Subjt:  IEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESE

Query:  TRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS
        TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRGYK+ATWWEEDV+ E SS WR+
Subjt:  TRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

AT5G48790.1 Domain of unknown function (DUF1995)

1.3e-11

25.14

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Query:  ISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRD----------KERAAPVTRSSDPKAGVP-IYKPKTYEVLVSDAANSLAYALEDGEIRLEIDFPPL
        +SPSFS     + +SL G     +      +H ++          K RA  V+   +    V  +  P+ Y  L++ A  ++  AL+D +  +EI+FP  
Subjt:  ISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRD----------KERAAPVTRSSDPKAGVP-IYKPKTYEVLVSDAANSLAYALEDGEIRLEIDFPPL

Query:  PSNISSYKGSSD---EFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASE-LFKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFED--
         S ++S  G  +   E  ++   +     R L  ++   + I FP+  E + A + +F      +D +T  SL +                 DF F +  
Subjt:  PSNISSYKGSSD---EFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASE-LFKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFED--

Query:  ENAGRWTSSDPPSLYIFINCSTRELGLIEK-YVETFASSIPTL-LFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKT----VAIAPYI
        + A R    D   L  +   +  E+ ++E+ Y E   ++   L +FN EL+ +R+     G+ PK             FY ++   +KT    +    YI
Subjt:  ENAGRWTSSDPPSLYIFINCSTRELGLIEK-YVETFASSIPTL-LFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKT----VAIAPYI

Query:  VNY----SGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELL
         N+     G LFR YPGPWQV L+++ N Y CV + E+  +L E   ++L
Subjt:  VNY----SGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELL

Sequences

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CDS sequence

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ATGGCGATCATGGCGTTTCTCTCTTCACCACCGCACATTCCCTCTCTGTCTCGGCCGTTTCACTGCAACTTTCTCTTCTCTCCCATTTCTCCTTCCTTCAGTGCACTACG
GCGTTCTACTCGATCCAGTTTATTTGGCGCTCAAACTTTGGCGACTTCGGGATTTTGCTTTAGGATACACTGTCGTGACAAAGAACGAGCTGCGCCGGTTACTCGGAGCT
CCGATCCTAAGGCTGGAGTTCCGATTTATAAGCCTAAAACCTACGAGGTGCTAGTCTCCGATGCTGCGAATTCTCTTGCTTATGCTCTCGAGGATGGAGAGATCCGCTTG
GAGATTGATTTTCCACCCCTGCCTAGCAACATTTCCTCGTATAAGGGATCTTCAGATGAGTTCATTGATGCAAATATTCAATTGGCCCTGGCTGTTGCAAGGAATCTTCA
AGAAAAGAGAGGAACTAGATCTTGCATTGTGTTCCCAGATAAGCCAGAGAAGCGCAGAGCTTCAGAGTTGTTCAAAACAGCTCTTGACTCGATTGATGGAATAACTGTAA
GTTCCCTGGATGATGTCCCTGCTGGACCTGTCACATCTTTCTTCAGATCCGTTAGAAACACCCTTGATTTTGATTTTGAAGACGAGAATGCAGGTCGTTGGACATCTAGT
GACCCTCCATCTTTGTATATATTCATTAATTGTAGCACGCGTGAACTTGGTTTGATAGAGAAGTATGTGGAAACTTTTGCTTCATCAATCCCCACCCTGTTGTTTAATCT
AGAACTTGAAACCTTGCGTGCGGACTTGGGCTTGCTGGGATTTCCCCCCAAAGATTTGCACTATCGATTTCTCTCTCAGTTTATTCCAGTGTTCTACATACGAATCAGAG
AGTATTCTAAGACAGTAGCAATAGCACCTTATATTGTTAATTATAGTGGAGCATTGTTTCGTCAATACCCTGGACCTTGGCAAGTGATGCTAAAACAATCAGATAATTCT
TATGCTTGCGTTGCAGAGAGTGAGACAAGGTTCACCCTTGGTGAAACCAAAGATGAACTATTAAGGGTCCTTGGACTACAGGAGGAACAAGGAAGCTCACTAGAATTTCT
CCGCAGGGGCTACAAGGCTGCCACTTGGTGGGAAGAAGACGTTGACTCTGAAGTATCTTCAGCATGGCGTAGTTGA

mRNA sequence

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ATGAAATATACAAATGAAAAAAATTGTAATTGCAGCAAAGTCTACTCAATTATACCAGTAATCACCGTTATCCACATTCCAAGAAGTTGAGGGGGCTTATGCAAATATTC
TAGAAGAGAGAGGATCCGCGGGAAAAAATCATAGAGTGGCGTCTTCAAGTTCGTTATCGTCTCATCCAAACGACCGGCTGTCTTTTCCCCGGCGACTGAACTTCCACTGA
GAACTTCAGAACTTCAGAACTTCAGAGAGCTTAGCCATGGCGATCATGGCGTTTCTCTCTTCACCACCGCACATTCCCTCTCTGTCTCGGCCGTTTCACTGCAACTTTCT
CTTCTCTCCCATTTCTCCTTCCTTCAGTGCACTACGGCGTTCTACTCGATCCAGTTTATTTGGCGCTCAAACTTTGGCGACTTCGGGATTTTGCTTTAGGATACACTGTC
GTGACAAAGAACGAGCTGCGCCGGTTACTCGGAGCTCCGATCCTAAGGCTGGAGTTCCGATTTATAAGCCTAAAACCTACGAGGTGCTAGTCTCCGATGCTGCGAATTCT
CTTGCTTATGCTCTCGAGGATGGAGAGATCCGCTTGGAGATTGATTTTCCACCCCTGCCTAGCAACATTTCCTCGTATAAGGGATCTTCAGATGAGTTCATTGATGCAAA
TATTCAATTGGCCCTGGCTGTTGCAAGGAATCTTCAAGAAAAGAGAGGAACTAGATCTTGCATTGTGTTCCCAGATAAGCCAGAGAAGCGCAGAGCTTCAGAGTTGTTCA
AAACAGCTCTTGACTCGATTGATGGAATAACTGTAAGTTCCCTGGATGATGTCCCTGCTGGACCTGTCACATCTTTCTTCAGATCCGTTAGAAACACCCTTGATTTTGAT
TTTGAAGACGAGAATGCAGGTCGTTGGACATCTAGTGACCCTCCATCTTTGTATATATTCATTAATTGTAGCACGCGTGAACTTGGTTTGATAGAGAAGTATGTGGAAAC
TTTTGCTTCATCAATCCCCACCCTGTTGTTTAATCTAGAACTTGAAACCTTGCGTGCGGACTTGGGCTTGCTGGGATTTCCCCCCAAAGATTTGCACTATCGATTTCTCT
CTCAGTTTATTCCAGTGTTCTACATACGAATCAGAGAGTATTCTAAGACAGTAGCAATAGCACCTTATATTGTTAATTATAGTGGAGCATTGTTTCGTCAATACCCTGGA
CCTTGGCAAGTGATGCTAAAACAATCAGATAATTCTTATGCTTGCGTTGCAGAGAGTGAGACAAGGTTCACCCTTGGTGAAACCAAAGATGAACTATTAAGGGTCCTTGG
ACTACAGGAGGAACAAGGAAGCTCACTAGAATTTCTCCGCAGGGGCTACAAGGCTGCCACTTGGTGGGAAGAAGACGTTGACTCTGAAGTATCTTCAGCATGGCGTAGTT
GAGCAGCTTGAGTATCGATTATTTCCTCCTCGTATCTTCATAAACACAACATCGATGACATCGGACATGAGATGCCAACCATATTTCCTTGTTCAAACGGATGGCTCTTT
CTAAAAGACTCTCATGGCCTCTCTTTAAACAATTACTGCAGGGAAATTCTATCTCAAAGTTAAATCTACATCTCTTTTCAACCCACCAGCTTCAGAAGATTGACACAAAC
TTGAATCCAACTCATTCACCTCTGGAATTCAAGGTGAAGTAATCTTGTACATTTTATAACTCAGCGATAAATTATGATGTGTTGTTCATCTTGATACCGAGTTTCATTTT
CTTTTTCACTCATTCCTTCAAAAAATATAAATTCTCAGATGGTTTGATCCTTGTCAAGAATGAAGTTCAACTATTTTCATGCATCCATAATATGTAGGATCATCCAAACC
ATTACACTACTTGTTTTGGAAAGAAAATAAAAGCAATTGCTTTGGACTAAAAGCTAATTATTGTTTATAAACTTTACATTCAAACATTATCCTCAA

Protein sequence

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MAIMAFLSSPPHIPSLSRPFHCNFLFSPISPSFSALRRSTRSSLFGAQTLATSGFCFRIHCRDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGEIRL
EIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPEKRRASELFKTALDSIDGITVSSLDDVPAGPVTSFFRSVRNTLDFDFEDENAGRWTSS
DPPSLYIFINCSTRELGLIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRQYPGPWQVMLKQSDNS
YACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDVDSEVSSAWRS

Clc09G03560 (gene) of Watermelon (cordophanus) v2 genome