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Clc09G03860 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G03860
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNon-specific lipid-transfer protein
Genome locationClcChr09:3005248..3006436
RNA-Seq ExpressionClc09G03860
SyntenyClc09G03860
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000528 - Plant non-specific lipid-transfer protein/Par allergen
IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058675.1 non-specific lipid-transfer protein 8 [Cucumis melo var. makuwa]3.0e-4687.18Show/hide
Query:  STIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGIT
        +TIPKLGAIL  + +L L  SKA ISC+DVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAAT+ ADKKAACQCIKSAASNVNYNAKLA+DLPSNCGIT
Subjt:  STIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGIT

Query:  LPFSISAGIDCSKYENL
        LPFSISAGIDCSKYE L
Subjt:  LPFSISAGIDCSKYENL

XP_004135897.1 non-specific lipid-transfer protein 8 [Cucumis sativus]1.5e-4583.9Show/hide
Query:  MATLRSTIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPS
        M TLR+ IPKLGA+L  + +L LQ SKA ISC+DVTKDLMPCVSYL+SGSGKPPSACCDGAKALSSAAT+SADKKAAC+CIKSAASNVNYN KLA+DLPS
Subjt:  MATLRSTIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPS

Query:  NCGITLPFSISAGIDCSK
        NCGI+LPFSISAGIDCSK
Subjt:  NCGITLPFSISAGIDCSK

XP_008461223.1 PREDICTED: non-specific lipid-transfer protein 8 [Cucumis melo]1.7e-4487.61Show/hide
Query:  STIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGIT
        +TIPKLGAIL  + +L L  SKA ISC+DVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAAT+ ADKKAACQCIKSAASNVNYNAKLA+DLPSNCGIT
Subjt:  STIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGIT

Query:  LPFSISAGIDCSK
        LPFSISAGIDCSK
Subjt:  LPFSISAGIDCSK

XP_023514955.1 non-specific lipid-transfer protein 8-like [Cucurbita pepo subsp. pepo]1.6e-3977.12Show/hide
Query:  MATLRSTIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPS
        MA+L+ TI         +++L LQ+S+AAISCNDVTKDL PCVSYL+SGSGKPPSACCDGAKALS AAT+S DKKAACQCIKS A NV YNAKLAEDLP 
Subjt:  MATLRSTIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPS

Query:  NCGITLPFSISAGIDCSK
        NCGITLPFSISAGIDCSK
Subjt:  NCGITLPFSISAGIDCSK

XP_038900062.1 non-specific lipid-transfer protein 8 [Benincasa hispida]1.5e-5094.17Show/hide
Query:  MATLRST-IPKLGA-ILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDL
        MATLRST IPKL A +LFVIL LFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLA+DL
Subjt:  MATLRST-IPKLGA-ILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDL

Query:  PSNCGITLPFSISAGIDCSK
        PSNCGI+LPFSISAGIDCSK
Subjt:  PSNCGITLPFSISAGIDCSK

TrEMBL top hitse value%identityAlignment
A0A0A0K657 Non-specific lipid-transfer protein7.3e-4683.9Show/hide
Query:  MATLRSTIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPS
        M TLR+ IPKLGA+L  + +L LQ SKA ISC+DVTKDLMPCVSYL+SGSGKPPSACCDGAKALSSAAT+SADKKAAC+CIKSAASNVNYN KLA+DLPS
Subjt:  MATLRSTIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPS

Query:  NCGITLPFSISAGIDCSK
        NCGI+LPFSISAGIDCSK
Subjt:  NCGITLPFSISAGIDCSK

A0A1S3CEM4 Non-specific lipid-transfer protein8.0e-4587.61Show/hide
Query:  STIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGIT
        +TIPKLGAIL  + +L L  SKA ISC+DVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAAT+ ADKKAACQCIKSAASNVNYNAKLA+DLPSNCGIT
Subjt:  STIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGIT

Query:  LPFSISAGIDCSK
        LPFSISAGIDCSK
Subjt:  LPFSISAGIDCSK

A0A5A7UYN6 Non-specific lipid-transfer protein1.5e-4687.18Show/hide
Query:  STIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGIT
        +TIPKLGAIL  + +L L  SKA ISC+DVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAAT+ ADKKAACQCIKSAASNVNYNAKLA+DLPSNCGIT
Subjt:  STIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGIT

Query:  LPFSISAGIDCSKYENL
        LPFSISAGIDCSKYE L
Subjt:  LPFSISAGIDCSKYENL

A0A6J1H5K9 Non-specific lipid-transfer protein1.7e-3976.27Show/hide
Query:  MATLRSTIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPS
        MA+L+ TI         +++L LQ+S+AAISCNDVTKDLMPCVSYL+SGSGKPPSACCDGAKALS AAT+S DKKAAC+CIKS A +V YNAKLAEDLP 
Subjt:  MATLRSTIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPS

Query:  NCGITLPFSISAGIDCSK
        NCGITLPFSISAGIDCSK
Subjt:  NCGITLPFSISAGIDCSK

A0A6J1KW15 Non-specific lipid-transfer protein1.7e-3984.16Show/hide
Query:  ILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGITLPFSISAGIDCS
        +++L LQ+S+AAISCNDVTK+LMPCVSYL+SGSGKPPSACCDGAKALS AAT+S DKKAAC+CIKS A NV YNAKLAEDLP NCGITLPFSISAGIDCS
Subjt:  ILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGITLPFSISAGIDCS

Query:  K
        K
Subjt:  K

SwissProt top hitse value%identityAlignment
A2ZAS9 Non-specific lipid-transfer protein 32.1e-1838.66Show/hide
Query:  MATLRSTIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNV-NYNAKLAEDLP
        MA  R T+  +  +  V   +  + + AA+SC DVT  + PC+SY++     P S+CC G + L+  A++SAD++ AC C+K+ AS+  N N   A  +P
Subjt:  MATLRSTIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNV-NYNAKLAEDLP

Query:  SNCGITLPFSISAGIDCSK
        S CG+++ F IS  +DCSK
Subjt:  SNCGITLPFSISAGIDCSK

Q42842 Non-specific lipid-transfer protein 4.36.6e-2047.62Show/hide
Query:  ILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGITLPFSISAG
        ++ ++  + L  + AAISC  V+  L PC+SY      KPP ACC G K L+ AA ++ADK+AAC+CIKSAA  +  NA  A  +PS CG+++P++ISA 
Subjt:  ILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGITLPFSISAG

Query:  IDCSK
        +DCSK
Subjt:  IDCSK

Q43767 Non-specific lipid-transfer protein 4.13.0e-2047.62Show/hide
Query:  ILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGITLPFSISAG
        ++ ++  + L  + AAISC  V+  L PC+SY      KPP+ACC G K L+ AA ++ADK+AAC+CIKSAA  +  NA  A  +PS CG+++P++ISA 
Subjt:  ILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGITLPFSISAG

Query:  IDCSK
        +DCSK
Subjt:  IDCSK

Q43875 Non-specific lipid-transfer protein 4.21.1e-1946.67Show/hide
Query:  ILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGITLPFSISAG
        ++ ++  + +  + AAISC  V+  L PC+SY      KPP ACC G K L+ AA ++ADK+AAC+CIKSAA  +  NA  A  +PS CG+++P++ISA 
Subjt:  ILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGITLPFSISAG

Query:  IDCSK
        +DCSK
Subjt:  IDCSK

Q9ZPW9 Non-specific lipid-transfer protein 81.8e-2557.55Show/hide
Query:  AILFVILILFL-QDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGITLPFSIS
        AI+ V+ I F+ + S++AISC+ V +DL PCVSYL SGSG PP  CCDG K+L++A TTSADKKAACQCIKS A++V    +LA+ L SNCG +LP   S
Subjt:  AILFVILILFL-QDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGITLPFSIS

Query:  AGIDCS
          +DC+
Subjt:  AGIDCS

Arabidopsis top hitse value%identityAlignment
AT2G18370.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.3e-2657.55Show/hide
Query:  AILFVILILFL-QDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGITLPFSIS
        AI+ V+ I F+ + S++AISC+ V +DL PCVSYL SGSG PP  CCDG K+L++A TTSADKKAACQCIKS A++V    +LA+ L SNCG +LP   S
Subjt:  AILFVILILFL-QDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGITLPFSIS

Query:  AGIDCS
          +DC+
Subjt:  AGIDCS

AT3G08770.1 lipid transfer protein 64.1e-1741.82Show/hide
Query:  ILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKL---AEDLPSNCGITLPFSI
        +L V L+L L   +AA+SCN V  DL PC+SY+  G G  P+ CC+G   L S A TS D++  C+CIKSA   +  + +    A +LPS CG+ LP+  
Subjt:  ILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKL---AEDLPSNCGITLPFSI

Query:  SAGIDCSKYE
        S   DC   +
Subjt:  SAGIDCSKYE

AT3G08770.2 lipid transfer protein 65.4e-1743.4Show/hide
Query:  ILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKL---AEDLPSNCGITLPFSI
        +L V L+L L   +AA+SCN V  DL PC+SY+  G G  P+ CC+G   L S A TS D++  C+CIKSA   +  + +    A +LPS CG+ LP+  
Subjt:  ILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKL---AEDLPSNCGITLPFSI

Query:  SAGIDC
        S   DC
Subjt:  SAGIDC

AT5G01870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.7e-1641.12Show/hide
Query:  ILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNA---KLAEDLPSNCGITLPFSI
        +  ++  +F   S+AAISCN V  +L PCV Y+V G G  P +CC+G + LS  AT+++DK+  C+CIKS    V+Y++   K A  LP  CG+ LP+ I
Subjt:  ILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNA---KLAEDLPSNCGITLPFSI

Query:  SAGIDCS
            +C+
Subjt:  SAGIDCS

AT5G59320.1 lipid transfer protein 32.3e-1541.18Show/hide
Query:  VILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVN-YNAKLAEDLPSNCGITLPFSISAGID
        V+ +  +    AAISC  V   L PC +YL  G   PPS CC G K L+S A T+ D++ AC+CI+S A +++  N  LA  LP  CG+++P+ IS   +
Subjt:  VILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVN-YNAKLAEDLPSNCGITLPFSISAGID

Query:  CS
        C+
Subjt:  CS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCTTAGATCAACCATTCCCAAGCTTGGAGCTATATTGTTTGTGATATTAATTTTGTTTCTTCAAGATTCAAAGGCTGCAATCTCATGCAATGATGTGACAAA
GGATTTGATGCCATGTGTGAGTTACCTTGTGAGTGGGAGTGGGAAGCCACCAAGTGCTTGTTGTGATGGTGCAAAAGCACTTTCTTCAGCAGCCACAACTAGTGCTGACA
AGAAGGCTGCATGTCAATGCATCAAGTCAGCTGCTAGTAATGTGAATTACAATGCTAAATTGGCTGAAGATCTTCCTTCCAATTGTGGCATTACCCTACCTTTCTCCATC
TCTGCTGGCATTGACTGCTCTAAGTATGAAAATCTTGAGAGATTAATTGATGATTATGAGAAAGCATTTGATCAGAAGGGACCAGAAATGACAGAATTCTACTATAAAGT
TGGAGAGGAAGTATTACATATTATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTCTTAGATCAACCATTCCCAAGCTTGGAGCTATATTGTTTGTGATATTAATTTTGTTTCTTCAAGATTCAAAGGCTGCAATCTCATGCAATGATGTGACAAA
GGATTTGATGCCATGTGTGAGTTACCTTGTGAGTGGGAGTGGGAAGCCACCAAGTGCTTGTTGTGATGGTGCAAAAGCACTTTCTTCAGCAGCCACAACTAGTGCTGACA
AGAAGGCTGCATGTCAATGCATCAAGTCAGCTGCTAGTAATGTGAATTACAATGCTAAATTGGCTGAAGATCTTCCTTCCAATTGTGGCATTACCCTACCTTTCTCCATC
TCTGCTGGCATTGACTGCTCTAAGTATGAAAATCTTGAGAGATTAATTGATGATTATGAGAAAGCATTTGATCAGAAGGGACCAGAAATGACAGAATTCTACTATAAAGT
TGGAGAGGAAGTATTACATATTATATAA
Protein sequenceShow/hide protein sequence
MATLRSTIPKLGAILFVILILFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAEDLPSNCGITLPFSI
SAGIDCSKYENLERLIDDYEKAFDQKGPEMTEFYYKVGEEVLHII