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Clc09G03945 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G03945
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTransmembrane protein, putative
Genome locationClcChr09:3057718..3057993
RNA-Seq ExpressionClc09G03945
SyntenyClc09G03945
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575656.1 hypothetical protein SDJN03_26295, partial [Cucurbita argyrosperma subsp. sororia]5.7e-2172.22Show/hide
Query:  MIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPS-DGEASPSPKECHGECETVFEEGS
        M+MEI HLEGM  TAAVF+LVQILVYLILSKSS VFSKNT RSLSFR+V+SL+I RI+ ALSDFPS DG+    P E  GEC T+F+EGS
Subjt:  MIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPS-DGEASPSPKECHGECETVFEEGS
XP_022147203.1 uncharacterized protein LOC111016209 [Momordica charantia]8.3e-2068.42Show/hide
Query:  MMIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGE-----ASPSPKECHGECETVFEEGS
        MM MEI  LEG++ATAAVF LVQILVYLILSKSS VFSKNT RSLSFR V+SLSI RI+ ALSD PS GE      SPSP    GEC  +F +GS
Subjt:  MMIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGE-----ASPSPKECHGECETVFEEGS
XP_022954080.1 uncharacterized protein LOC111456452 [Cucurbita moschata]4.4e-2171.91Show/hide
Query:  MIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPKECHGECETVFEEGS
        M+MEI HLEGM  TAAVF+LVQILVYLILSKSS VFSKNT RSLSFR+V+SLSI RI+ ALSDFPS    +  P E  GEC T+F+EGS
Subjt:  MIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPKECHGECETVFEEGS
XP_023548863.1 uncharacterized protein LOC111807384 [Cucurbita pepo subsp. pepo]9.8e-2170.79Show/hide
Query:  MIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPKECHGECETVFEEGS
        M+MEI HLEGM  TAAVF+LVQILVYLILSKSS VFSKNT RSLSFR+V+SL+I RI+ ALSDFPS    +  P E  GEC T+F+EGS
Subjt:  MIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPKECHGECETVFEEGS
XP_038898457.1 uncharacterized protein LOC120086089 [Benincasa hispida]2.0e-1868.89Show/hide
Query:  MMIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPKECHGECETVFEEGS
        MM+MEISH +GM+ATAAVF+LVQILVYLILSKSSQVFSK  NRSLSFR+VQSLS  RII+ LSDFPS  ++S          ET F+EGS
Subjt:  MMIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPKECHGECETVFEEGS
TrEMBL top hitse value%identityAlignment
A0A371I8K6 Uncharacterized protein (Fragment)9.0e-1261.97Show/hide
Query:  SHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPKE
        S L  ML   AVFVLVQ LVYLILS SS +FSKN  R+ SF+  +SLSI R++  +SDFP +GE SPSPKE
Subjt:  SHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPKE
A0A6J1D0M4 uncharacterized protein LOC1110162094.0e-2068.42Show/hide
Query:  MMIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGE-----ASPSPKECHGECETVFEEGS
        MM MEI  LEG++ATAAVF LVQILVYLILSKSS VFSKNT RSLSFR V+SLSI RI+ ALSD PS GE      SPSP    GEC  +F +GS
Subjt:  MMIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGE-----ASPSPKECHGECETVFEEGS
A0A6J1GRF7 uncharacterized protein LOC1114564522.1e-2171.91Show/hide
Query:  MIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPKECHGECETVFEEGS
        M+MEI HLEGM  TAAVF+LVQILVYLILSKSS VFSKNT RSLSFR+V+SLSI RI+ ALSDFPS    +  P E  GEC T+F+EGS
Subjt:  MIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPKECHGECETVFEEGS
A0A6J1JXQ0 uncharacterized protein LOC1114884404.2e-1770.73Show/hide
Query:  MIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPKECHGECE
        M+MEI HLEGM  TAAVF+LVQILVYLILSKSS VFSKNT RSLSFR+V+SLSI RI+ ALSDFPS    +  P E  G  E
Subjt:  MIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPKECHGECE
V7BSW8 Uncharacterized protein1.5e-1162.86Show/hide
Query:  SHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPK
        S L  ML    VFVLVQ LVYLILS SS +FSKN  RS SFR  +S+SI R++  +SDFPS+GE SPSPK
Subjt:  SHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05575.1 unknown protein3.4e-1156.72Show/hide
Query:  EGMLATAAVFVLVQILVYLILSKSSQVF--SKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPS
        EGML   ++F L+Q LVYLILSKSS VF  SK   R+ SFR  +S+SI RI+  L D P+ GE SPS
Subjt:  EGMLATAAVFVLVQILVYLILSKSSQVF--SKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPS
AT2G31945.1 unknown protein3.5e-0852.31Show/hide
Query:  MLATAAVFVLVQILVYLILSKSSQVFSKNTN--RSLSFRRVQSLSICRIIEALSDFPSDGEASPS
        ML   A+F LVQ LVYLIL KSS+VF+++ +  R+ SFR ++S+SI RI+ AL D P+  + SPS
Subjt:  MLATAAVFVLVQILVYLILSKSSQVFSKNTN--RSLSFRRVQSLSICRIIEALSDFPSDGEASPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATTATGGAGATTAGTCATTTGGAAGGAATGCTAGCGACTGCTGCCGTGTTCGTCCTTGTGCAGATTCTAGTCTATCTAATTCTCTCTAAATCTTCCCAAGTCTT
CTCTAAGAACACGAACAGGTCTCTCAGTTTTCGACGCGTTCAATCTCTGAGTATTTGTCGGATTATTGAAGCTCTCTCCGATTTTCCCTCCGATGGCGAGGCATCTCCTT
CTCCAAAAGAATGTCATGGAGAATGTGAAACGGTGTTCGAAGAAGGCAGTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATTATGGAGATTAGTCATTTGGAAGGAATGCTAGCGACTGCTGCCGTGTTCGTCCTTGTGCAGATTCTAGTCTATCTAATTCTCTCTAAATCTTCCCAAGTCTT
CTCTAAGAACACGAACAGGTCTCTCAGTTTTCGACGCGTTCAATCTCTGAGTATTTGTCGGATTATTGAAGCTCTCTCCGATTTTCCCTCCGATGGCGAGGCATCTCCTT
CTCCAAAAGAATGTCATGGAGAATGTGAAACGGTGTTCGAAGAAGGCAGTTTGTAA
Protein sequenceShow/hide protein sequence
MMIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPKECHGECETVFEEGSL