; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G03960 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G03960
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:3062307..3062714
RNA-Seq ExpressionClc09G03960
SyntenyClc09G03960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575658.1 hypothetical protein SDJN03_26297, partial [Cucurbita argyrosperma subsp. sororia]6.1e-0471.05Show/hide
Query:  MIQLNPEALRTEPENGDGNRPGGPLIPVRFLRPFGGVK
        MIQLNPEA +TEPE  DG RP  PLIP RF R FG VK
Subjt:  MIQLNPEALRTEPENGDGNRPGGPLIPVRFLRPFGGVK
KGN45174.1 hypothetical protein Csa_016039 [Cucumis sativus]2.9e-1467.61Show/hide
Query:  MIQLNPEALRTEPENGDGNRPGGPLIPVRFLRPFGGVKGQIMLLFGLSDSENVKFDGFDFTTN-FPVVFIH
        +IQLNPEA   EPE  DGNR   PLIPVRFLR FGGVKGQ  + FGLSDSE+VKFD FD     FPV F+H
Subjt:  MIQLNPEALRTEPENGDGNRPGGPLIPVRFLRPFGGVKGQIMLLFGLSDSENVKFDGFDFTTN-FPVVFIH
TrEMBL top hitse value%identityAlignment
A0A0A0K8G2 Uncharacterized protein1.4e-1467.61Show/hide
Query:  MIQLNPEALRTEPENGDGNRPGGPLIPVRFLRPFGGVKGQIMLLFGLSDSENVKFDGFDFTTN-FPVVFIH
        +IQLNPEA   EPE  DGNR   PLIPVRFLR FGGVKGQ  + FGLSDSE+VKFD FD     FPV F+H
Subjt:  MIQLNPEALRTEPENGDGNRPGGPLIPVRFLRPFGGVKGQIMLLFGLSDSENVKFDGFDFTTN-FPVVFIH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGCATTTCTTCTCATCTTCGTCGCCAAAGCCATCAACAACGATATTCTTCCAATTAAGGAGGTTGATGAAGACGATGAAATGATTCAATTGAATCCGGAAGCTCT
GAGAACAGAGCCGGAGAACGGCGACGGAAACCGACCTGGTGGACCGCTCATTCCTGTTCGATTCCTTCGGCCTTTCGGCGGAGTGAAGGGTCAGATAATGTTGCTTTTTG
GTTTATCCGATTCGGAGAATGTAAAGTTCGATGGTTTTGACTTTACTACAAACTTTCCCGTCGTCTTCATACATACGTCAATTATCTCTCTTTTTACAATAGGCGGTGGA
AAAATTCAACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCATGCATTTCTTCTCATCTTCGTCGCCAAAGCCATCAACAACGATATTCTTCCAATTAAGGAGGTTGATGAAGACGATGAAATGATTCAATTGAATCCGGAAGCTCT
GAGAACAGAGCCGGAGAACGGCGACGGAAACCGACCTGGTGGACCGCTCATTCCTGTTCGATTCCTTCGGCCTTTCGGCGGAGTGAAGGGTCAGATAATGTTGCTTTTTG
GTTTATCCGATTCGGAGAATGTAAAGTTCGATGGTTTTGACTTTACTACAAACTTTCCCGTCGTCTTCATACATACGTCAATTATCTCTCTTTTTACAATAGGCGGTGGA
AAAATTCAACTATGA
Protein sequenceShow/hide protein sequence
MHAFLLIFVAKAINNDILPIKEVDEDDEMIQLNPEALRTEPENGDGNRPGGPLIPVRFLRPFGGVKGQIMLLFGLSDSENVKFDGFDFTTNFPVVFIHTSIISLFTIGGG
KIQL