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Clc09G03990 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G03990
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEcotropic viral integration site protein
Genome locationClcChr09:3080701..3084774
RNA-Seq ExpressionClc09G03990
SyntenyClc09G03990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014211.1 hypothetical protein SDJN02_24386 [Cucurbita argyrosperma subsp. argyrosperma]3.7e-5391.67Show/hide
Query:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD
        M  + KADEQLF LLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVS+LEIAKELDKLSEKLD+VDEMISSAMAADPQVQSLLSDTAD
Subjt:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD

Query:  IWMPVITASADERQNFTASVGANSETEENCTS
        IWMPVITASADER+ FTASVG NSETEENC S
Subjt:  IWMPVITASADERQNFTASVGANSETEENCTS
XP_004135903.1 uncharacterized protein LOC101220647 [Cucumis sativus]2.4e-5291.67Show/hide
Query:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD
        MAH+ KADEQLFQLLA+LLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDE   LEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD
Subjt:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD

Query:  IWMPVITASADERQNFTASVGANSETEENCTS
        IWMPVITASADER+NFT SVG NSETE NC S
Subjt:  IWMPVITASADERQNFTASVGANSETEENCTS
XP_008461245.1 PREDICTED: uncharacterized protein LOC103499886 [Cucumis melo]2.9e-5090.7Show/hide
Query:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD
        MAH+ KADEQLFQLLA LLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDE   LEIAKELDKLSEKLDNVDEMISSAMA+DPQVQSLLSDTAD
Subjt:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD

Query:  IWMPVITASADERQNFTASVGANSETEEN
        IWMPVITASADER+NFT+SVG N ETE N
Subjt:  IWMPVITASADERQNFTASVGANSETEEN
XP_022953424.1 uncharacterized protein LOC111455983 [Cucurbita moschata]2.2e-5090.15Show/hide
Query:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD
        M  + KADEQLF LLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDE   LEIAKELDKLSEKLD+VDEMISSAMAADPQVQSLLSDTAD
Subjt:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD

Query:  IWMPVITASADERQNFTASVGANSETEENCTS
        IWMPVITASADER+ FTASVG NSETEENC S
Subjt:  IWMPVITASADERQNFTASVGANSETEENCTS
XP_038899531.1 uncharacterized protein LOC120086812 [Benincasa hispida]1.1e-5291.67Show/hide
Query:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD
        MA + KADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDE   LEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD
Subjt:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD

Query:  IWMPVITASADERQNFTASVGANSETEENCTS
        IWMPVITASADER+NFTAS+G NSETEENC +
Subjt:  IWMPVITASADERQNFTASVGANSETEENCTS
TrEMBL top hitse value%identityAlignment
A0A0A0KBJ8 Uncharacterized protein1.2e-5291.67Show/hide
Query:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD
        MAH+ KADEQLFQLLA+LLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDE   LEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD
Subjt:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD

Query:  IWMPVITASADERQNFTASVGANSETEENCTS
        IWMPVITASADER+NFT SVG NSETE NC S
Subjt:  IWMPVITASADERQNFTASVGANSETEENCTS
A0A1S3CEA0 uncharacterized protein LOC1034998861.4e-5090.7Show/hide
Query:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD
        MAH+ KADEQLFQLLA LLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDE   LEIAKELDKLSEKLDNVDEMISSAMA+DPQVQSLLSDTAD
Subjt:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD

Query:  IWMPVITASADERQNFTASVGANSETEEN
        IWMPVITASADER+NFT+SVG N ETE N
Subjt:  IWMPVITASADERQNFTASVGANSETEEN
A0A5A7UWV6 Uncharacterized protein1.4e-5090.7Show/hide
Query:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD
        MAH+ KADEQLFQLLA LLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDE   LEIAKELDKLSEKLDNVDEMISSAMA+DPQVQSLLSDTAD
Subjt:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD

Query:  IWMPVITASADERQNFTASVGANSETEEN
        IWMPVITASADER+NFT+SVG N ETE N
Subjt:  IWMPVITASADERQNFTASVGANSETEEN
A0A6J1GPL7 uncharacterized protein LOC1114559831.1e-5090.15Show/hide
Query:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD
        M  + KADEQLF LLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDE   LEIAKELDKLSEKLD+VDEMISSAMAADPQVQSLLSDTAD
Subjt:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD

Query:  IWMPVITASADERQNFTASVGANSETEENCTS
        IWMPVITASADER+ FTASVG NSETEENC S
Subjt:  IWMPVITASADERQNFTASVGANSETEENCTS
A0A6J1JXP7 uncharacterized protein LOC1114884342.4e-5090Show/hide
Query:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD
        M  + KADEQLF LLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDE   LEI+KELDKLSEKLD+VDEMISSAMAADPQVQSLLSDTAD
Subjt:  MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTAD

Query:  IWMPVITASADERQNFTASVGANSETEENC
        IWMPVITASADER+ FTASVG NSETEENC
Subjt:  IWMPVITASADERQNFTASVGANSETEENC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G44360.1 unknown protein5.0e-4071.64Show/hide
Query:  QAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWM
        + K DEQLFQLL+ LL QVESLTN EEVELR+KIEALGLEVTKVPSKS + L+EV   EIAKELDKLS KLD+VDEMISSA+A+DPQVQ+LLS TAD+WM
Subjt:  QAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWM

Query:  PVITASADERQNFTASVG-----ANSETEENCTS
        PVITA A+ER NFTAS+      +N ET  + TS
Subjt:  PVITASADERQNFTASVG-----ANSETEENCTS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCACCAAGCGAAGGCGGACGAGCAACTCTTTCAGCTTCTTGCCAGTCTTCTTCACCAGGTGGAATCACTTACCAACCAGGAAGAAGTTGAATTGCGTACAAAGAT
CGAAGCCCTTGGACTTGAAGTTACAAAAGTACCCTCAAAGTCCTTAAAGCAGCTTGATGAAGTCAGTATGCTGGAAATTGCCAAGGAGCTGGATAAGCTATCTGAAAAGC
TAGATAACGTGGATGAAATGATTTCTTCAGCAATGGCTGCAGATCCACAGGTGCAGTCTCTGTTGAGTGATACTGCTGATATTTGGATGCCAGTGATAACTGCTTCGGCC
GATGAACGACAAAATTTTACAGCTTCTGTTGGAGCAAATTCAGAAACAGAAGAAAATTGTACCAGTTAG
mRNA sequenceShow/hide mRNA sequence
GTGAATCCGTAGTTCATGCAAACGAGAGAGCGTGTCACATTGGCCACAAGAACCGCCAAATTGGGCGCCATTTCATTCTACAAGAACCTAAATCCCGAAAACATTACTCA
GCAAAATCCGAAGCCGATTACAGAAAAACATGGCCCACCAAGCGAAGGCGGACGAGCAACTCTTTCAGCTTCTTGCCAGTCTTCTTCACCAGGTGGAATCACTTACCAAC
CAGGAAGAAGTTGAATTGCGTACAAAGATCGAAGCCCTTGGACTTGAAGTTACAAAAGTACCCTCAAAGTCCTTAAAGCAGCTTGATGAAGTCAGTATGCTGGAAATTGC
CAAGGAGCTGGATAAGCTATCTGAAAAGCTAGATAACGTGGATGAAATGATTTCTTCAGCAATGGCTGCAGATCCACAGGTGCAGTCTCTGTTGAGTGATACTGCTGATA
TTTGGATGCCAGTGATAACTGCTTCGGCCGATGAACGACAAAATTTTACAGCTTCTGTTGGAGCAAATTCAGAAACAGAAGAAAATTGTACCAGTTAGATATCATTTTTT
TTCTTTTGTTTCATTAAGGGATAAGTAATTTCAATTCTCTATCATTATTTTGTTATGTTTGATAAAGAATGTGTTCTAATGCTAGCATTTACAATGGTTGGGATGTATTT
TTCCGAAGAATGCCATCTTGTCTGTAGAAATCTTTCATAATTGTCTAAACATAAAAGTTACGAAGCC
Protein sequenceShow/hide protein sequence
MAHQAKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSMLEIAKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASA
DERQNFTASVGANSETEENCTS