; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G04140 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G04140
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description60S ribosomal protein L6
Genome locationClcChr09:3295560..3297556
RNA-Seq ExpressionClc09G04140
SyntenyClc09G04140
Gene Ontology termsGO:0000027 - ribosomal large subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000915 - 60S ribosomal protein L6E
IPR005568 - Ribosomal protein L6, N-terminal
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041997 - Ribosomal Protein L6, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011659463.1 60S ribosomal protein L6-1 [Cucumis sativus]1.7e-11796.54Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKA APA+K PKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVN EKFDDKYFSKE QKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF
        IKSIE VPELKAYLGARFSLKAGMKPHELVF
Subjt:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF

XP_022954334.1 60S ribosomal protein L6-3-like [Cucurbita moschata]4.9e-11795.67Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAK KADAPA+KSPKFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSY IATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPA++KDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF
        IKSI+GVPELKAYL ARFSLKAGMKPHELVF
Subjt:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF

XP_022991926.1 60S ribosomal protein L6-1-like [Cucurbita maxima]1.5e-11896.54Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPA+KSPKFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSY IATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPA++KDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF
        IKSIEGVPELKAYL ARFSLKAGMKPHELVF
Subjt:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF

XP_023548320.1 uncharacterized protein LOC111806995 isoform X2 [Cucurbita pepo subsp. pepo]6.4e-11795.67Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHD K KADAPA+KSPKFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSY IATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPA++KDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF
        IKSIEGVPELKAYL ARFSLKAGMKPHELVF
Subjt:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF

XP_038896966.1 60S ribosomal protein L6-1-like [Benincasa hispida]3.7e-11795.67Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAP +K PKFYPADDVKKPLVNKRK KLTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS LPA+KKDDQ+AVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF
        IKSIE VPELKAYLGARFSLKAGMKPHELVF
Subjt:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF

TrEMBL top hitse value%identityAlignment
A0A0A0K9V0 60S ribosomal protein L68.1e-11896.54Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKA APA+K PKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVN EKFDDKYFSKE QKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF
        IKSIE VPELKAYLGARFSLKAGMKPHELVF
Subjt:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF

A0A1S3CEA6 60S ribosomal protein L64.0e-11796.1Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA  PA+K PKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVN EKFDDKYFSKE QKKKKK EGEFFEAEKEEKSALPAEKKDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF
        IKSIE VPELKAYLGARFSLKAGMKPHELVF
Subjt:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF

A0A6J1GSP4 60S ribosomal protein L6-3-like2.4e-11795.67Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAK KADAPA+KSPKFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSY IATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPA++KDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF
        IKSI+GVPELKAYL ARFSLKAGMKPHELVF
Subjt:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF

A0A6J1H5C5 60S ribosomal protein L62.9e-11593.94Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKADA  +K PKFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKV+ISGVN EKFDDKYFSKEVQKKKKK EGEFFEAEKEEKSALPA+KKDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF
        IKSIEGVPELKAYL ARFSLK+GMKPHEL F
Subjt:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF

A0A6J1JS55 60S ribosomal protein L6-1-like7.3e-11996.54Show/hide
Query:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF
        MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPA+KSPKFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRF
Subjt:  MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRF

Query:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL
        KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSY IATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPA++KDDQKAVDTPL
Subjt:  KGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPL

Query:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF
        IKSIEGVPELKAYL ARFSLKAGMKPHELVF
Subjt:  IKSIEGVPELKAYLGARFSLKAGMKPHELVF

SwissProt top hitse value%identityAlignment
P34091 60S ribosomal protein L61.6e-10283.19Show/hide
Query:  PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRV
        P V+RNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       +K PKFYPADDVKKPL+NKRK K TKLRASITPGTVLIILAGRFKGKRV
Subjt:  PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRV

Query:  VFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIE
        VFLKQL SGLLLVTGPFK+NGVPLRRVNQ+YVIATSTKVDISGVN+EKFDDKYF K+ +KK KKGEGEFFEAEK+E + LP EKKDDQKAVD  L+K+IE
Subjt:  VFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIE

Query:  GVPELKAYLGARFSLKAGMKPHELVF
        GVPELKAYLGARFSLKAGMKPHELVF
Subjt:  GVPELKAYLGARFSLKAGMKPHELVF

Q2YGT9 60S ribosomal protein L67.7e-4946.8Show/hide
Query:  PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAD-------------------KSPKFYPADDVKKPLVNKRKAKLT----K
        P  +RNP L+RG+G+YSRS MY ++ L+  K K      + + K K    A                    K P++YP +DV + L++  K   +    K
Subjt:  PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAD-------------------KSPKFYPADDVKKPLVNKRKAKLT----K

Query:  LRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNI-EKFDDKYFSKEVQKKKKKGEGEFFEAEKEE
        LRASITPGT+LIIL GR +GKRV+FLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTK+DISGV I E   D YF K+  +K +  EGE F+ EK E
Subjt:  LRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNI-EKFDDKYFSKEVQKKKKKGEGEFFEAEKEE

Query:  KSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF
        K  +  ++K DQKAVD+ +++ I+ VP+L+ YL + F+L  G+ PH+LVF
Subjt:  KSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF

Q9C9C5 60S ribosomal protein L6-39.3e-10383.77Show/hide
Query:  KIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGK
        + P+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP +K PKFYPA+DVKKPL N+R AK TKLRASITPGTVLIILAGRFKGK
Subjt:  KIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKS
        RVVFLKQL SGLLLVTGPFKINGVPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +P  KKDDQKAVD  LIK+
Subjt:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKS

Query:  IEGVPELKAYLGARFSLKAGMKPHELVF
        IE VPELK YLGARFSLK GMKPHELVF
Subjt:  IEGVPELKAYLGARFSLKAGMKPHELVF

Q9C9C6 60S ribosomal protein L6-23.0e-10184Show/hide
Query:  RVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVV
        +V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP +K PKFYPA+DVKKPL N+R AK  KLRASITPGTVLIILAGRFKGKRVV
Subjt:  RVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVV

Query:  FLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEG
        FLKQL SGLLLVTGPFKINGVPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +P  KKDDQKAVD  LIK+IE 
Subjt:  FLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEG

Query:  VPELKAYLGARFSLKAGMKPHELVF
        VPELK YLGARFSLK GMKPHELVF
Subjt:  VPELKAYLGARFSLKAGMKPHELVF

Q9FZ76 60S ribosomal protein L6-12.4e-10383.04Show/hide
Query:  APKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFK
        A + P+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP +K  KFYPA+DVKKPLVN+RK K TKL+ASITPGTVLIILAGRFK
Subjt:  APKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFK

Query:  GKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLI
        GKRVVFLKQL SGLLLVTGPFKINGVPLRRVNQ+YVI TSTK+DISGVN EKFDDKYF K  +KKKKK EGEFFEAEKEEK  +P EKK+DQK VD  LI
Subjt:  GKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLI

Query:  KSIEGVPELKAYLGARFSLKAGMKPHELVF
        KSIE VPELK YLGARFSL  GMKPHELVF
Subjt:  KSIEGVPELKAYLGARFSLKAGMKPHELVF

Arabidopsis top hitse value%identityAlignment
AT1G18540.1 Ribosomal protein L6 family protein1.7e-10483.04Show/hide
Query:  APKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFK
        A + P+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP +K  KFYPA+DVKKPLVN+RK K TKL+ASITPGTVLIILAGRFK
Subjt:  APKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFK

Query:  GKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLI
        GKRVVFLKQL SGLLLVTGPFKINGVPLRRVNQ+YVI TSTK+DISGVN EKFDDKYF K  +KKKKK EGEFFEAEKEEK  +P EKK+DQK VD  LI
Subjt:  GKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLI

Query:  KSIEGVPELKAYLGARFSLKAGMKPHELVF
        KSIE VPELK YLGARFSL  GMKPHELVF
Subjt:  KSIEGVPELKAYLGARFSLKAGMKPHELVF

AT1G74050.1 Ribosomal protein L6 family protein6.6e-10483.77Show/hide
Query:  KIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGK
        + P+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP +K PKFYPA+DVKKPL N+R AK TKLRASITPGTVLIILAGRFKGK
Subjt:  KIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGK

Query:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKS
        RVVFLKQL SGLLLVTGPFKINGVPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +P  KKDDQKAVD  LIK+
Subjt:  RVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKS

Query:  IEGVPELKAYLGARFSLKAGMKPHELVF
        IE VPELK YLGARFSLK GMKPHELVF
Subjt:  IEGVPELKAYLGARFSLKAGMKPHELVF

AT1G74060.1 Ribosomal protein L6 family protein2.1e-10284Show/hide
Query:  RVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVV
        +V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP +K PKFYPA+DVKKPL N+R AK  KLRASITPGTVLIILAGRFKGKRVV
Subjt:  RVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVV

Query:  FLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEG
        FLKQL SGLLLVTGPFKINGVPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +P  KKDDQKAVD  LIK+IE 
Subjt:  FLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEG

Query:  VPELKAYLGARFSLKAGMKPHELVF
        VPELK YLGARFSLK GMKPHELVF
Subjt:  VPELKAYLGARFSLKAGMKPHELVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCCAAAATCCCCAGAGTTACAAGAAACCCGGATCTAATCCGAGGTGTCGGCAAGTACTCGAGGTCTAAGATGTATCATAAGCGGGGTCTTTGGGCCATCAAGGC
CAAAAATGGCGGAGTGTTCCCTCGTCACGATGCCAAGCCGAAAGCGGATGCCCCAGCCGATAAGTCGCCGAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTTA
ACAAGCGCAAGGCCAAGCTCACTAAGCTCAGAGCTAGCATTACTCCTGGTACTGTGTTGATAATCCTCGCTGGGAGGTTCAAAGGGAAGAGAGTTGTGTTTTTGAAACAG
CTGCCATCTGGGTTGCTTCTGGTCACCGGGCCATTCAAGATTAATGGTGTTCCTCTAAGACGAGTGAACCAATCGTATGTGATTGCAACCTCCACCAAAGTTGACATCTC
TGGTGTGAACATCGAAAAGTTCGACGACAAGTACTTTTCCAAGGAAGTCCAGAAGAAGAAGAAGAAGGGTGAAGGAGAATTTTTTGAGGCAGAGAAAGAGGAGAAGAGTG
CTCTCCCGGCTGAGAAGAAGGATGACCAGAAAGCTGTGGATACACCATTGATAAAGTCGATTGAGGGGGTTCCAGAGTTGAAGGCTTACTTGGGAGCAAGATTTTCTCTC
AAGGCTGGAATGAAACCTCATGAGCTTGTGTTTTAG
mRNA sequenceShow/hide mRNA sequence
TATGAGGACCTTTTTATTAGGGTTTTTCTACCCAATATATAAATACCATTATTTGTGAATTAGGGTTTCTGGCAGTAGTCGTCTTTCTCGTTGCGAAGAAGAGCACCGCT
GAGACAGCAGAGATACGCTAATGGCGCCCAAAATCCCCAGAGTTACAAGAAACCCGGATCTAATCCGAGGTGTCGGCAAGTACTCGAGGTCTAAGATGTATCATAAGCGG
GGTCTTTGGGCCATCAAGGCCAAAAATGGCGGAGTGTTCCCTCGTCACGATGCCAAGCCGAAAGCGGATGCCCCAGCCGATAAGTCGCCGAAGTTTTACCCTGCCGATGA
TGTGAAGAAGCCCCTTGTTAACAAGCGCAAGGCCAAGCTCACTAAGCTCAGAGCTAGCATTACTCCTGGTACTGTGTTGATAATCCTCGCTGGGAGGTTCAAAGGGAAGA
GAGTTGTGTTTTTGAAACAGCTGCCATCTGGGTTGCTTCTGGTCACCGGGCCATTCAAGATTAATGGTGTTCCTCTAAGACGAGTGAACCAATCGTATGTGATTGCAACC
TCCACCAAAGTTGACATCTCTGGTGTGAACATCGAAAAGTTCGACGACAAGTACTTTTCCAAGGAAGTCCAGAAGAAGAAGAAGAAGGGTGAAGGAGAATTTTTTGAGGC
AGAGAAAGAGGAGAAGAGTGCTCTCCCGGCTGAGAAGAAGGATGACCAGAAAGCTGTGGATACACCATTGATAAAGTCGATTGAGGGGGTTCCAGAGTTGAAGGCTTACT
TGGGAGCAAGATTTTCTCTCAAGGCTGGAATGAAACCTCATGAGCTTGTGTTTTAGATAAGGGATTTGGTTTTTTCTTATTATTTTTTAAATTATCACCTTGTTTTCTGT
TCATCTGAACTTGGTATGACTTGTAATAGTTGCCTAATCCCAAATTTTGATTCTAAATAGAGATTCCATGTTTTATAATTTCTTTTTTTCTTTATGGAATTTATTTTTGA
GTTTCTTTCTTGGTTCTGTAACACTCCAGTACATAGTTTCACAGGTTTTCTGATTGTTTTGTCTCATAGAGCCACCTGAACTCTGAGCAAAGCTTTTCACTAAGTTTGTT
TGATAACAAACAAACGACCTTACTTGAAGAGGATTTGTTCCATAGGTTGGACATTTGGGATGCTTTTCATTGATTATATTTATTATTACTTCTGAA
Protein sequenceShow/hide protein sequence
MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQ
LPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSL
KAGMKPHELVF