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Clc09G04220 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G04220
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:3360378..3363181
RNA-Seq ExpressionClc09G04220
SyntenyClc09G04220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5445905.1 hypothetical protein F2P56_031580 [Juglans regia]1.3e-0443.01Show/hide
Query:  NSSEREQEVKNELITLNADDYDAGRGLGTTTNNLMRRRIAAAG--AKLLGVVAVVGVSRWMVVHPSSLRAMRMKSGDNPDTGIKNLYELPHGD
        N   +   VKNE  +     +     LGT    L R  +AAAG  A  + VV VVGVSR +VVH +SL A+RMKS  N    I+ L++L HGD
Subjt:  NSSEREQEVKNELITLNADDYDAGRGLGTTTNNLMRRRIAAAG--AKLLGVVAVVGVSRWMVVHPSSLRAMRMKSGDNPDTGIKNLYELPHGD
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGTTCAAACTCCGACGCGACCAACTCCAGTGAGCGAGAGCAAGAAGTAAAGAATGAACTCATTACTCTCAACGCTGACGACTACGACGCCGGCCGTGGGCTCGG
CACCACAACGAACAATCTGATGAGACGACGCATCGCCGCCGCTGGGGCGAAACTCCTCGGAGTGGTGGCCGTCGTCGGAGTTAGCCGGTGGATGGTAGTACATCCGTCCA
GTCTGAGGGCAATGCGAATGAAATCTGGCGACAATCCTGACACCGGCATCAAGAATCTCTACGAACTTCCCCATGGAGATGCCGAAGGAATGGAAATCTCTGCAACGATC
GGAGTAGGAATTGGAATTAGAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGTTCAAACTCCGACGCGACCAACTCCAGTGAGCGAGAGCAAGAAGTAAAGAATGAACTCATTACTCTCAACGCTGACGACTACGACGCCGGCCGTGGGCTCGG
CACCACAACGAACAATCTGATGAGACGACGCATCGCCGCCGCTGGGGCGAAACTCCTCGGAGTGGTGGCCGTCGTCGGAGTTAGCCGGTGGATGGTAGTACATCCGTCCA
GTCTGAGGGCAATGCGAATGAAATCTGGCGACAATCCTGACACCGGCATCAAGAATCTCTACGAACTTCCCCATGGAGATGCCGAAGGAATGGAAATCTCTGCAACGATC
GGAGTAGGAATTGGAATTAGAATCTGA
Protein sequenceShow/hide protein sequence
MKSSNSDATNSSEREQEVKNELITLNADDYDAGRGLGTTTNNLMRRRIAAAGAKLLGVVAVVGVSRWMVVHPSSLRAMRMKSGDNPDTGIKNLYELPHGDAEGMEISATI
GVGIGIRI